Conservation of cofitness between IAI47_03660 and IAI47_07000 in Pantoea sp. MT58

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pantoea sp. MT58 1.0 IAI47_03660 biosynthetic arginine decarboxylase 1.0 IAI47_07000 UDP-glucose 4-epimerase GalE 0.43 5
Erwinia tracheiphila SCR3 0.91 LU632_RS05510 speA biosynthetic arginine decarboxylase 0.82 LU632_RS08830 galE UDP-glucose 4-epimerase GalE low > 74
Enterobacter sp. TBS_079 0.88 MPMX20_03799 Biosynthetic arginine decarboxylase 0.62 MPMX20_01386 UDP-glucose 4-epimerase low > 85
Enterobacter asburiae PDN3 0.88 EX28DRAFT_2978 arginine decarboxylase (EC 4.1.1.19) 0.62 EX28DRAFT_2236 UDP-glucose-4-epimerase GalE low > 76
Escherichia coli ECRC101 0.88 MCAODC_09825 speA biosynthetic arginine decarboxylase 0.61 MCAODC_25935 galE UDP-glucose 4-epimerase GalE — —
Escherichia fergusonii Becca 0.88 EFB2_00962 Biosynthetic arginine decarboxylase 0.61 EFB2_03347 UDP-glucose 4-epimerase low > 86
Escherichia coli ECRC102 0.88 NIAGMN_17070 speA biosynthetic arginine decarboxylase 0.61 NIAGMN_04765 galT galactose-1-phosphate uridylyltransferase — —
Escherichia coli ECOR27 0.88 NOLOHH_11175 speA biosynthetic arginine decarboxylase 0.61 NOLOHH_23145 galE UDP-glucose 4-epimerase GalE low > 57
Escherichia coli ECOR38 0.88 HEPCGN_18610 speA biosynthetic arginine decarboxylase 0.61 HEPCGN_01560 galT galactose-1-phosphate uridylyltransferase low > 85
Escherichia coli ECRC62 0.88 BNILDI_09755 speA biosynthetic arginine decarboxylase 0.64 BNILDI_20120 galE UDP-glucose 4-epimerase GalE — —
Escherichia coli ECRC99 0.88 KEDOAH_08835 speA biosynthetic arginine decarboxylase 0.61 KEDOAH_21250 galT galactose-1-phosphate uridylyltransferase — —
Escherichia coli Nissle 1917 0.88 ECOLIN_RS16350 biosynthetic arginine decarboxylase 0.61 ECOLIN_RS04040 UDP-glucose 4-epimerase GalE low > 52
Escherichia coli ECRC101 0.88 OKFHMN_19305 speA biosynthetic arginine decarboxylase 0.61 OKFHMN_06715 galT galactose-1-phosphate uridylyltransferase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.88 OHPLBJKB_00778 Biosynthetic arginine decarboxylase 0.61 OHPLBJKB_02954 UDP-glucose 4-epimerase low > 73
Escherichia coli ECRC98 0.88 JDDGAC_22935 speA biosynthetic arginine decarboxylase 0.61 JDDGAC_10370 galT galactose-1-phosphate uridylyltransferase — —
Escherichia coli BW25113 0.87 b2938 speA arginine decarboxylase (NCBI) 0.61 b0759 galE UDP-galactose-4-epimerase (VIMSS) low > 76
Serratia liquefaciens MT49 0.85 IAI46_21140 biosynthetic arginine decarboxylase 0.77 IAI46_08115 UDP-glucose 4-epimerase GalE low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.85 GFF3040 Biosynthetic arginine decarboxylase (EC 4.1.1.19) 0.62 GFF652 UDP-N-acetylglucosamine 4-epimerase (EC 5.1.3.7) / UDP-glucose 4-epimerase (EC 5.1.3.2) low > 78
Dickeya dianthicola ME23 0.84 DZA65_RS19595 biosynthetic arginine decarboxylase 0.59 DZA65_RS06990 UDP-glucose 4-epimerase GalE low > 75
Dickeya dianthicola 67-19 0.84 HGI48_RS18460 biosynthetic arginine decarboxylase 0.60 HGI48_RS06635 UDP-glucose 4-epimerase GalE low > 71
Dickeya dadantii 3937 0.84 DDA3937_RS18535 biosynthetic arginine decarboxylase 0.60 DDA3937_RS06615 UDP-glucose 4-epimerase GalE low > 74
Rahnella sp. WP5 0.84 EX31_RS21355 biosynthetic arginine decarboxylase 0.59 EX31_RS23580 UDP-glucose 4-epimerase GalE low > 89
Pectobacterium carotovorum WPP14 0.84 HER17_RS02665 biosynthetic arginine decarboxylase 0.60 HER17_RS14765 UDP-glucose 4-epimerase GalE low > 75
Shewanella sp. ANA-3 0.54 Shewana3_1624 arginine decarboxylase (RefSeq) 0.57 Shewana3_2783 UDP-galactose 4-epimerase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.54 SO1870 speA biosynthetic arginine decarboxylase (NCBI ptt file) 0.58 SO1664 galE UDP-glucose 4-epimerase (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.53 Shew_1619 arginine decarboxylase (RefSeq) 0.58 Shew_1433 UDP-glucose 4-epimerase (RefSeq) — —
Shewanella amazonensis SB2B 0.52 Sama_1963 arginine decarboxylase (RefSeq) 0.59 Sama_2224 UDP-glucose 4-epimerase (RefSeq) low > 62
Vibrio cholerae E7946 ATCC 55056 0.51 CSW01_18235 arginine decarboxylase 0.56 CSW01_18045 UDP-glucose 4-epimerase GalE low > 62
Marinobacter adhaerens HP15 0.51 HP15_272 biosynthetic arginine decarboxylase 0.32 HP15_2048 UDP-glucose 4-epimerase low > 73
Xanthomonas campestris pv. campestris strain 8004 0.42 Xcc-8004.4909.1 Biosynthetic arginine decarboxylase (EC 4.1.1.19) 0.52 Xcc-8004.4678.1 UDP-glucose 4-epimerase (EC 5.1.3.2) — —
Lysobacter sp. OAE881 0.42 ABIE51_RS00125 arginine decarboxylase 0.54 ABIE51_RS07955 UDP-glucose 4-epimerase GalE — —
Rhodanobacter denitrificans MT42 0.42 LRK55_RS08900 arginine decarboxylase 0.33 LRK55_RS17620 UDP-glucose 4-epimerase GalE low > 63
Bacteroides thetaiotaomicron VPI-5482 0.40 BT3394 putative arginine decarboxylase (NCBI ptt file) 0.46 BT0623 putative UDP-glucose 4-epimerase (NCBI ptt file) — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.40 Psyr_4381 arginine decarboxylase 0.55 Psyr_2704 UDP-galactose 4-epimerase low > 86
Pseudomonas syringae pv. syringae B728a 0.40 Psyr_4381 arginine decarboxylase 0.55 Psyr_2704 UDP-galactose 4-epimerase low > 86
Pseudomonas stutzeri RCH2 0.40 Psest_3366 Biosynthetic arginine decarboxylase (EC 4.1.1.19) (from data) 0.59 Psest_0069 UDP-glucose-4-epimerase low > 67
Bacteroides ovatus ATCC 8483 0.40 BACOVA_01911 arginine 2-monooxygenase 0.46 BACOVA_02242 UDP-glucose 4-epimerase — —
Bacteroides stercoris CC31F 0.39 HMPREF1181_RS02535 biosynthetic arginine decarboxylase 0.47 HMPREF1181_RS15095 UDP-glucose 4-epimerase GalE low > 56
Rhodanobacter denitrificans FW104-10B01 0.39 LRK54_RS09140 arginine decarboxylase 0.33 LRK54_RS17395 UDP-glucose 4-epimerase GalE — —
Pseudomonas fluorescens FW300-N1B4 0.39 Pf1N1B4_1296 Biosynthetic arginine decarboxylase (EC 4.1.1.19) (from data) 0.51 Pf1N1B4_5092 UDP-glucose 4-epimerase (EC 5.1.3.2) — —
Pseudomonas putida KT2440 0.39 PP_0567 Biosynthetic arginine decarboxylase 0.32 PP_3129 UDP-glucose 4-epimerase low > 96
Pseudomonas fluorescens FW300-N2E3 0.39 AO353_13720 arginine decarboxylase 0.38 AO353_21135 UDP-galactose-4-epimerase low > 101
Phocaeicola dorei CL03T12C01 0.39 ABI39_RS04690 biosynthetic arginine decarboxylase 0.47 ABI39_RS20070 UDP-glucose 4-epimerase GalE low > 72
Phocaeicola vulgatus CL09T03C04 0.39 HMPREF1058_RS12110 biosynthetic arginine decarboxylase 0.47 HMPREF1058_RS06310 UDP-glucose 4-epimerase GalE low > 67
Parabacteroides merdae CL09T00C40 0.39 HMPREF1078_RS15005 biosynthetic arginine decarboxylase 0.45 HMPREF1078_RS15420 UDP-glucose 4-epimerase GalE — —
Synechococcus elongatus PCC 7942 0.36 Synpcc7942_1037 speA arginine decarboxylase 0.37 Synpcc7942_0320 galE UDP-galactose 4-epimerase — —
Desulfovibrio vulgaris Miyazaki F 0.34 DvMF_1536 arginine decarboxylase (RefSeq) 0.34 DvMF_0137 UDP-glucose 4-epimerase (RefSeq) 0.42 6
Desulfovibrio vulgaris Hildenborough JW710 0.33 DVU0417 speA arginine decarboxylase (TIGR) 0.38 DVU1360 galE UDP-glucose 4-epimerase (TIGR) low > 55
Alteromonas macleodii MIT1002 0.32 MIT1002_03905 Biosynthetic arginine decarboxylase 0.61 MIT1002_00970 UDP-glucose 4-epimerase low > 70

Not shown: 13 genomes with orthologs for IAI47_03660 only; 36 genomes with orthologs for IAI47_07000 only