| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pantoea sp. MT58 | 1.0 | IAI47_18395 | | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | 1.0 | IAI47_03620 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.35 | 8 |
| Erwinia tracheiphila SCR3 | 0.72 | LU632_RS24130 | yigB | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | 0.84 | LU632_RS05485 | rsmE | 16S rRNA (uracil(1498)-N(3))-methyltransferase | low | > 74 |
| Pectobacterium carotovorum WPP14 | 0.68 | HER17_RS01355 | | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | 0.76 | HER17_RS02640 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | low | > 75 |
| Klebsiella michiganensis M5al | 0.63 | BWI76_RS01215 | | flavin mononucleotide phosphatase | 0.79 | BWI76_RS24070 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | — | — |
| Rahnella sp. WP5 | 0.63 | EX31_RS15170 | | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | 0.80 | EX31_RS02660 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | low | > 89 |
| Escherichia coli Nissle 1917 | 0.63 | ECOLIN_RS21880 | | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | 0.82 | ECOLIN_RS16390 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | low | > 55 |
| Enterobacter sp. TBS_079 | 0.63 | MPMX20_04464 | | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | 0.81 | MPMX20_03804 | | Ribosomal RNA small subunit methyltransferase E | low | > 85 |
| Escherichia fergusonii Becca | 0.62 | EFB2_04825 | | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | 0.82 | EFB2_00956 | | Ribosomal RNA small subunit methyltransferase E | low | > 86 |
| Escherichia coli ECRC100 | 0.62 | OKFHMN_14415 | yigB | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | 0.82 | OKFHMN_19280 | rsmE | 16S rRNA (uracil(1498)-N(3))-methyltransferase | low | > 80 |
| Escherichia coli ECRC98 | 0.62 | JDDGAC_18040 | yigB | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | 0.82 | JDDGAC_22910 | rsmE | 16S rRNA (uracil(1498)-N(3))-methyltransferase | low | > 86 |
| Escherichia coli ECRC99 | 0.62 | KEDOAH_13735 | yigB | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | 0.82 | KEDOAH_08860 | rsmE | 16S rRNA (uracil(1498)-N(3))-methyltransferase | — | — |
| Escherichia coli ECOR38 | 0.62 | HEPCGN_13120 | yigB | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | 0.82 | HEPCGN_18585 | | Ribosomal RNA small subunit methyltransferase E | low | > 87 |
| Escherichia coli BL21 | 0.62 | ECD_03688 | | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase; pyrimidine phosphatase; riboflavin synthesis | 0.82 | ECD_02776 | | 16S rRNA m(3)U1498 methyltransferase, SAM-dependent | low | > 61 |
| Escherichia coli ECOR27 | 0.62 | NOLOHH_06545 | yigB | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | 0.82 | NOLOHH_11150 | rsmE | 16S rRNA (uracil(1498)-N(3))-methyltransferase | low | > 75 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.62 | OHPLBJKB_04238 | | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | 0.82 | OHPLBJKB_00772 | | Ribosomal RNA small subunit methyltransferase E | low | > 73 |
| Escherichia coli ECRC102 | 0.62 | NIAGMN_12170 | yigB | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | 0.82 | NIAGMN_17045 | rsmE | 16S rRNA (uracil(1498)-N(3))-methyltransferase | — | — |
| Escherichia coli ECRC101 | 0.62 | MCAODC_04920 | yigB | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | 0.82 | MCAODC_09800 | rsmE | 16S rRNA (uracil(1498)-N(3))-methyltransferase | low | > 87 |
| Escherichia coli ECRC62 | 0.62 | BNILDI_04990 | yigB | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | 0.82 | BNILDI_09730 | rsmE | 16S rRNA (uracil(1498)-N(3))-methyltransferase | low | > 75 |
| Serratia liquefaciens MT49 | 0.62 | IAI46_00730 | | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | 0.83 | IAI46_21385 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | low | > 86 |
| Escherichia coli BW25113 | 0.62 | b3812 | yigB | predicted hydrolase (NCBI) | 0.82 | b2946 | yggJ | orf, hypothetical protein (VIMSS) | low | > 76 |
| Enterobacter asburiae PDN3 | 0.62 | EX28DRAFT_4481 | | haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | 0.81 | EX28DRAFT_2984 | | RNA methyltransferase, RsmE family | low | > 76 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.61 | GFF240 | | 'Putative FMN hydrolase (EC 3.1.3.-); 5-Amino-6-(5'-phosphoribitylamino)uracil phosphatase' transl_table=11 | 0.80 | GFF3048 | | Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) | low | > 78 |
| Dickeya dadantii 3937 | 0.61 | DDA3937_RS19885 | | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | 0.79 | DDA3937_RS18555 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | low | > 74 |
| Dickeya dianthicola ME23 | 0.60 | DZA65_RS21085 | | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | 0.77 | DZA65_RS19625 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | low | > 75 |
| Dickeya dianthicola 67-19 | 0.60 | HGI48_RS20040 | | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | 0.76 | HGI48_RS18490 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | low | > 71 |
| Vibrio cholerae E7946 ATCC 55056 | 0.44 | CSW01_00655 | | 2-haloalkanoic acid dehalogenase | 0.67 | CSW01_02495 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | low | > 62 |
| Shewanella amazonensis SB2B | 0.34 | Sama_3246 | | HAD-superfamily hydrolase, subfamily IA, variant 1 family protein (RefSeq) | 0.64 | Sama_0575 | | 16S ribosomal RNA methyltransferase RsmE (RefSeq) | low | > 62 |
| Shewanella oneidensis MR-1 | 0.33 | SO4305 | | HAD-superfamily hydrolase, subfamily IA, variant 1 family protein (NCBI ptt file) | 0.67 | SO0832 | | conserved hypothetical protein TIGR00046 (NCBI ptt file) | low | > 76 |
| Shewanella loihica PV-4 | 0.30 | Shew_0326 | | HAD family hydrolase (RefSeq) | 0.67 | Shew_3224 | | hypothetical protein (RefSeq) | low | > 60 |
| Shewanella sp. ANA-3 | 0.30 | Shewana3_0394 | | HAD family hydrolase (RefSeq) | 0.66 | Shewana3_3444 | | 16S ribosomal RNA methyltransferase RsmE (RefSeq) | low | > 73 |
| Alteromonas macleodii MIT1002 | 0.29 | MIT1002_00156 | | Flavin mononucleotide phosphatase YigB | 0.45 | MIT1002_03054 | | Ribosomal RNA small subunit methyltransferase E | low | > 70 |
| Acidovorax sp. GW101-3H11 | 0.28 | Ac3H11_108 | | Hydrolase | 0.30 | Ac3H11_4323 | | Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) | low | > 79 |
| Pseudomonas stutzeri RCH2 | 0.25 | Psest_3768 | | haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | 0.39 | Psest_0305 | | RNA methyltransferase, RsmE family | low | > 67 |
| Pseudomonas fluorescens SBW25 | 0.25 | PFLU_RS29285 | | HAD-IA family hydrolase | 0.41 | PFLU_RS28200 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | low | > 109 |
| Lysobacter sp. OAE881 | 0.25 | ABIE51_RS03240 | | HAD-IA family hydrolase | 0.33 | ABIE51_RS05260 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | low | > 62 |
| Pseudomonas fluorescens SBW25-INTG | 0.25 | PFLU_RS29285 | | HAD-IA family hydrolase | 0.41 | PFLU_RS28200 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | low | > 109 |
| Pseudomonas simiae WCS417 | 0.25 | PS417_27600 | | HAD family hydrolase | 0.40 | PS417_26545 | | 16S rRNA methyltransferase | low | > 88 |
| Pseudomonas fluorescens GW456-L13 | 0.24 | PfGW456L13_841 | | Putative FMN hydrolase (EC 3.1.3.-); 5-Amino-6-(5'-phosphoribitylamino)uracil phosphatase | 0.40 | PfGW456L13_1043 | | Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) | low | > 87 |
| Pseudomonas putida KT2440 | 0.24 | PP_5231 | | putative (S)-2-haloacid dehalogenase | 0.40 | PP_4985 | | 16S rRNA m3U1498 methyltransferase | low | > 96 |
| Pseudomonas fluorescens FW300-N1B4 | 0.24 | Pf1N1B4_2170 | | Putative FMN hydrolase (EC 3.1.3.-); 5-Amino-6-(5'-phosphoribitylamino)uracil phosphatase | 0.39 | Pf1N1B4_2376 | | Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.23 | Xcc-8004.4953.1 | | Putative FMN hydrolase (EC 3.1.3.-); 5-Amino-6-(5'-phosphoribitylamino)uracil phosphatase | 0.38 | Xcc-8004.1558.1 | | Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.23 | AO356_12720 | | HAD family hydrolase | 0.40 | AO356_13565 | | 16S rRNA methyltransferase | low | > 104 |
| Pseudomonas fluorescens FW300-N2E3 | 0.23 | AO353_09055 | | HAD family hydrolase | 0.42 | AO353_08050 | | 16S rRNA methyltransferase | low | > 101 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.23 | GFF5114 | | Hydrolase | 0.26 | GFF2462 | | Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) | — | — |
| Pseudomonas sp. RS175 | 0.23 | PFR28_04379 | | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | 0.41 | PFR28_04209 | | Ribosomal RNA small subunit methyltransferase E | low | > 88 |
| Variovorax sp. SCN45 | 0.23 | GFF502 | | Hydrolase | 0.30 | GFF3255 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase (EC 2.1.1.193) | low | > 127 |
| Pseudomonas fluorescens FW300-N2E2 | 0.22 | Pf6N2E2_4415 | | Putative FMN hydrolase (EC 3.1.3.-); 5-Amino-6-(5'-phosphoribitylamino)uracil phosphatase | 0.40 | Pf6N2E2_4630 | | Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) | low | > 103 |
| Pseudomonas sp. S08-1 | 0.22 | OH686_13780 | | 2-haloalkanoic acid dehalogenase | 0.38 | OH686_10855 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | low | > 80 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.22 | Psyr_0186 | | HAD-superfamily hydrolase, subfamily IA, variant 3:HAD-superfamily hydrolase, subfamily IA, variant 1 | 0.40 | Psyr_0453 | | 16S rRNA m(3)U-1498 methyltransferase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.22 | Psyr_0186 | | HAD-superfamily hydrolase, subfamily IA, variant 3:HAD-superfamily hydrolase, subfamily IA, variant 1 | 0.40 | Psyr_0453 | | 16S rRNA m(3)U-1498 methyltransferase | low | > 86 |
| Rhodanobacter sp. FW510-T8 | 0.21 | OKGIIK_00140 | yigB | HAD family hydrolase | 0.35 | OKGIIK_11035 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | low | > 52 |
| Kangiella aquimarina DSM 16071 | 0.21 | B158DRAFT_0243 | | haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | 0.45 | B158DRAFT_0180 | | RNA methyltransferase, RsmE family | low | > 40 |
| Dyella japonica UNC79MFTsu3.2 | 0.20 | ABZR86_RS17535 | | HAD family hydrolase | 0.37 | ABZR86_RS10230 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | low | > 74 |
| Rhodanobacter denitrificans MT42 | 0.20 | LRK55_RS06185 | | HAD family hydrolase | 0.35 | LRK55_RS03930 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.20 | LRK54_RS06440 | | HAD family hydrolase | 0.35 | LRK54_RS04160 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.25 | 37 |
| Herbaspirillum seropedicae SmR1 | 0.19 | HSERO_RS03050 | | hydrolase | 0.32 | HSERO_RS07110 | | 16S rRNA methyltransferase | low | > 78 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.12 | ABZR88_RS20735 | | HAD family hydrolase | 0.17 | ABZR88_RS17085 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | low | > 71 |
Not shown: 1 genomes with orthologs for IAI47_18395 only; 43 genomes with orthologs for IAI47_03620 only