Conservation of cofitness between IAI46_22325 and IAI46_13985 in Serratia liquefaciens MT49

57 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Serratia liquefaciens MT49 1.0 IAI46_22325 monofunctional biosynthetic peptidoglycan transglycosylase 1.0 IAI46_13985 YciK family oxidoreductase 0.47 14
Pectobacterium carotovorum WPP14 0.75 HER17_RS19890 monofunctional biosynthetic peptidoglycan transglycosylase 0.73 HER17_RS10890 YciK family oxidoreductase low > 75
Rahnella sp. WP5 0.74 EX31_RS12525 monofunctional biosynthetic peptidoglycan transglycosylase 0.76 EX31_RS09910 YciK family oxidoreductase low > 89
Enterobacter sp. TBS_079 0.72 MPMX20_04113 Biosynthetic peptidoglycan transglycosylase 0.71 MPMX20_02505 putative oxidoreductase YciK low > 85
Enterobacter asburiae PDN3 0.71 EX28DRAFT_3261 monofunctional biosynthetic peptidoglycan transglycosylase 0.70 EX28DRAFT_0942 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) low > 76
Dickeya dadantii 3937 0.71 DDA3937_RS01685 monofunctional biosynthetic peptidoglycan transglycosylase 0.75 DDA3937_RS10510 YciK family oxidoreductase low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.71 GFF2952 Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-) 0.74 GFF2717 YciK-like oxidoreductase low > 78
Escherichia coli ECRC62 0.70 BNILDI_01825 mtgA monofunctional biosynthetic peptidoglycan transglycosylase 0.71 BNILDI_18435 yciK YciK family oxidoreductase low > 75
Escherichia coli ECOR38 0.70 HEPCGN_16785 mtgA monofunctional biosynthetic peptidoglycan transglycosylase 0.71 HEPCGN_25580 yciK YciK family oxidoreductase low > 87
Escherichia coli BL21 0.70 ECD_03073 biosynthetic peptidoglycan transglycosylase 0.71 ECD_01247 putative EmrKY-TolC system oxoacyl-(acyl carrier protein) reductase low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.70 OHPLBJKB_00492 Biosynthetic peptidoglycan transglycosylase 0.71 OHPLBJKB_02413 putative oxidoreductase YciK low > 73
Escherichia coli ECOR27 0.70 NOLOHH_09710 mtgA monofunctional biosynthetic peptidoglycan transglycosylase 0.71 NOLOHH_20285 yciK YciK family oxidoreductase low > 75
Escherichia coli BW25113 0.70 b3208 mtgA monofunctional biosynthetic peptidoglycan transglycosylase (NCBI) 0.71 b1271 yciK short chain dehydrogenase (NCBI) low > 76
Dickeya dianthicola 67-19 0.70 HGI48_RS01580 monofunctional biosynthetic peptidoglycan transglycosylase 0.75 HGI48_RS10510 YciK family oxidoreductase low > 71
Escherichia fergusonii Becca 0.70 EFB2_00615 Biosynthetic peptidoglycan transglycosylase 0.71 EFB2_02656 putative oxidoreductase YciK low > 86
Escherichia coli Nissle 1917 0.70 ECOLIN_RS18455 monofunctional biosynthetic peptidoglycan transglycosylase 0.71 ECOLIN_RS07645 YciK family oxidoreductase — —
Dickeya dianthicola ME23 0.69 DZA65_RS01655 monofunctional biosynthetic peptidoglycan transglycosylase 0.74 DZA65_RS10990 YciK family oxidoreductase low > 75
Escherichia coli ECRC100 0.69 OKFHMN_17910 mtgA monofunctional biosynthetic peptidoglycan transglycosylase 0.71 OKFHMN_02620 yciK YciK family oxidoreductase low > 80
Escherichia coli ECRC102 0.69 NIAGMN_15670 mtgA monofunctional biosynthetic peptidoglycan transglycosylase 0.71 NIAGMN_26790 yciK YciK family oxidoreductase — —
Escherichia coli ECRC99 0.69 KEDOAH_10240 mtgA monofunctional biosynthetic peptidoglycan transglycosylase 0.71 KEDOAH_26145 yciK YciK family oxidoreductase — —
Escherichia coli ECRC101 0.69 MCAODC_08430 mtgA monofunctional biosynthetic peptidoglycan transglycosylase 0.71 MCAODC_15645 yciK YciK family oxidoreductase low > 87
Escherichia coli ECRC98 0.69 JDDGAC_21535 mtgA monofunctional biosynthetic peptidoglycan transglycosylase 0.70 JDDGAC_05165 yciK YciK family oxidoreductase low > 86
Erwinia tracheiphila SCR3 0.68 LU632_RS21305 mtgA monofunctional biosynthetic peptidoglycan transglycosylase 0.65 LU632_RS12725 YciK family oxidoreductase low > 74
Klebsiella michiganensis M5al 0.67 BWI76_RS25290 monofunctional biosynthetic peptidoglycan transglycosylase 0.71 BWI76_RS11905 NAD(P)-dependent oxidoreductase — —
Pantoea sp. MT58 0.66 IAI47_17210 monofunctional biosynthetic peptidoglycan transglycosylase 0.73 IAI47_09220 YciK family oxidoreductase low > 76
Xanthomonas campestris pv. campestris strain 8004 0.46 Xcc-8004.1585.1 Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-) 0.17 Xcc-8004.2015.1 Short chain dehydrogenase low > 74
Pseudomonas stutzeri RCH2 0.46 Psest_0264 monofunctional biosynthetic peptidoglycan transglycosylase 0.40 Psest_2000 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 0.42 25
Pseudomonas fluorescens GW456-L13 0.46 PfGW456L13_997 Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-) 0.39 PfGW456L13_2169 Oxidoreductase, short chain dehydrogenase/reductase family low > 87
Pseudomonas sp. RS175 0.45 PFR28_04255 Biosynthetic peptidoglycan transglycosylase 0.39 PFR28_00899 putative oxidoreductase YciK — —
Pseudomonas fluorescens FW300-N2E2 0.45 Pf6N2E2_4587 Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-) 0.39 Pf6N2E2_2527 Oxidoreductase, short chain dehydrogenase/reductase family 0.20 43
Pseudomonas fluorescens FW300-N2C3 0.45 AO356_13360 monofunctional biosynthetic peptidoglycan transglycosylase 0.39 AO356_03500 3-oxoacyl-ACP reductase low > 104
Pseudomonas putida KT2440 0.45 PP_5107 Monofunctional biosynthetic peptidoglycan transglycosylase 0.38 PP_1763 putative oxidoreductase 0.17 56
Pseudomonas fluorescens SBW25-INTG 0.45 PFLU_RS28435 monofunctional biosynthetic peptidoglycan transglycosylase 0.40 PFLU_RS08060 YciK family oxidoreductase low > 109
Pseudomonas fluorescens SBW25 0.45 PFLU_RS28435 monofunctional biosynthetic peptidoglycan transglycosylase 0.40 PFLU_RS08060 YciK family oxidoreductase low > 109
Pseudomonas simiae WCS417 0.44 PS417_26790 peptidoglycan transglycosylase 0.40 PS417_08090 3-oxoacyl-ACP reductase low > 88
Rhodanobacter sp. FW510-T8 0.44 OKGIIK_01350 Biosynthetic peptidoglycan transglycosylase 0.24 OKGIIK_03065 yqjQ Short-chain dehydrogenase low > 52
Pseudomonas fluorescens FW300-N1B4 0.44 Pf1N1B4_2328 Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-) 0.40 Pf1N1B4_358 Oxidoreductase, short chain dehydrogenase/reductase family low > 87
Pseudomonas fluorescens FW300-N2E3 0.44 AO353_08230 monofunctional biosynthetic peptidoglycan transglycosylase 0.40 AO353_02105 3-oxoacyl-ACP reductase — —
Pseudomonas syringae pv. syringae B728a 0.44 Psyr_4743 Glycosyl transferase, family 51 0.40 Psyr_3652 Short-chain dehydrogenase/reductase SDR low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.44 Psyr_4743 Glycosyl transferase, family 51 0.40 Psyr_3652 Short-chain dehydrogenase/reductase SDR low > 86
Rhodanobacter denitrificans MT42 0.43 LRK55_RS05230 monofunctional biosynthetic peptidoglycan transglycosylase 0.23 LRK55_RS13545 SDR family NAD(P)-dependent oxidoreductase low > 63
Rhodanobacter denitrificans FW104-10B01 0.43 LRK54_RS05455 monofunctional biosynthetic peptidoglycan transglycosylase 0.23 LRK54_RS13830 SDR family NAD(P)-dependent oxidoreductase low > 59
Shewanella oneidensis MR-1 0.42 SO3735 mtgA monofunctional biosynthetic peptidoglycan transglycosylase (NCBI ptt file) 0.44 SO2935 oxidoreductase, short-chain dehydrogenase/reductase family (NCBI ptt file) low > 76
Lysobacter sp. OAE881 0.42 ABIE51_RS16250 monofunctional biosynthetic peptidoglycan transglycosylase 0.21 ABIE51_RS15375 SDR family NAD(P)-dependent oxidoreductase low > 62
Shewanella sp. ANA-3 0.42 Shewana3_0858 monofunctional biosynthetic peptidoglycan transglycosylase (RefSeq) 0.43 Shewana3_1528 short chain dehydrogenase (RefSeq) low > 73
Marinobacter adhaerens HP15 0.41 HP15_2780 monofunctional biosynthetic peptidoglycan transglycosylase 0.42 HP15_1225 oxidoreductase, short chain dehydrogenase/reductase family low > 73
Dyella japonica UNC79MFTsu3.2 0.41 ABZR86_RS18920 monofunctional biosynthetic peptidoglycan transglycosylase 0.21 ABZR86_RS09815 SDR family NAD(P)-dependent oxidoreductase low > 74
Pseudomonas sp. S08-1 0.40 OH686_14270 monofunctional biosynthetic peptidoglycan transglycosylase 0.40 OH686_20835 Oxidoreductase, short-chain dehydrogenase/reductase family low > 80
Azospirillum sp. SherDot2 0.36 MPMX19_02013 Biosynthetic peptidoglycan transglycosylase 0.25 MPMX19_00907 putative oxidoreductase YciK low > 112
Brevundimonas sp. GW460-12-10-14-LB2 0.36 A4249_RS13220 monofunctional biosynthetic peptidoglycan transglycosylase 0.23 A4249_RS03730 SDR family NAD(P)-dependent oxidoreductase low > 48
Rhodospirillum rubrum S1H 0.36 Rru_A0027 Monofunctional biosynthetic peptidoglycan transglycosylase (NCBI) 0.28 Rru_A0403 Short-chain dehydrogenase/reductase SDR (NCBI) — —
Caulobacter crescentus NA1000 0.35 CCNA_00328 monofunctional biosynthetic peptidoglycan transglycosylase MtgA 0.28 CCNA_01728 short chain dehydrogenase low > 66
Caulobacter crescentus NA1000 Δfur 0.35 CCNA_00328 monofunctional biosynthetic peptidoglycan transglycosylase MtgA 0.28 CCNA_01728 short chain dehydrogenase low > 67
Sphingomonas koreensis DSMZ 15582 0.35 Ga0059261_0666 monofunctional biosynthetic peptidoglycan transglycosylase 0.21 Ga0059261_3625 Short-chain dehydrogenases of various substrate specificities low > 68
Shewanella amazonensis SB2B 0.34 Sama_0740 monofunctional biosynthetic peptidoglycan transglycosylase (RefSeq) 0.45 Sama_2121 short chain dehydrogenase (RefSeq) 0.29 13
Bosea sp. OAE506 0.32 ABIE41_RS08685 monofunctional biosynthetic peptidoglycan transglycosylase 0.23 ABIE41_RS17815 SDR family NAD(P)-dependent oxidoreductase low > 77
Acinetobacter radioresistens SK82 0.29 MPMX26_02336 Biosynthetic peptidoglycan transglycosylase 0.49 MPMX26_00032 putative oxidoreductase YciK low > 36
Rhizobium sp. OAE497 0.28 ABIE40_RS18715 monofunctional biosynthetic peptidoglycan transglycosylase 0.26 ABIE40_RS06265 SDR family NAD(P)-dependent oxidoreductase low > 107

Not shown: 17 genomes with orthologs for IAI46_22325 only; 9 genomes with orthologs for IAI46_13985 only