Conservation of cofitness between IAI46_02945 and IAI46_09020 in Serratia liquefaciens MT49

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Serratia liquefaciens MT49 1.0 IAI46_02945 DNA repair protein RadA 1.0 IAI46_09020 DMT family transporter 0.41 15
Enterobacter sp. TBS_079 0.93 MPMX20_00694 DNA repair protein RadA 0.60 MPMX20_01692 hypothetical protein low > 85
Enterobacter asburiae PDN3 0.92 EX28DRAFT_3597 DNA repair protein RadA 0.61 EX28DRAFT_1921 Permeases of the drug/metabolite transporter (DMT) superfamily low > 76
Pantoea sp. MT58 0.91 IAI47_16345 DNA repair protein RadA 0.63 IAI47_12540 DMT family transporter low > 76
Dickeya dianthicola ME23 0.87 DZA65_RS02485 DNA repair protein RadA 0.10 DZA65_RS20090 DMT family transporter low > 75
Dickeya dianthicola 67-19 0.87 HGI48_RS02380 DNA repair protein RadA 0.10 HGI48_RS18980 DMT family transporter low > 71
Shewanella sp. ANA-3 0.77 Shewana3_1049 DNA repair protein RadA (RefSeq) 0.15 Shewana3_2736 hypothetical protein (RefSeq) low > 73
Vibrio cholerae E7946 ATCC 55056 0.76 CSW01_11870 DNA repair protein RadA 0.12 CSW01_08320 EamA/RhaT family transporter low > 62
Shewanella amazonensis SB2B 0.75 Sama_0981 DNA repair protein RadA (RefSeq) 0.14 Sama_1406 hypothetical protein (RefSeq) low > 62
Marinobacter adhaerens HP15 0.68 HP15_487 DNA repair protein RadA 0.09 HP15_1946 membrane protein containing DUF6, transmembrane low > 73
Pseudomonas sp. RS175 0.63 PFR28_03792 DNA repair protein RadA 0.57 PFR28_02401 hypothetical protein low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.63 Psyr_4275 DNA replication and repair protein RadA 0.67 Psyr_3251 Protein of unknown function DUF6 low > 86
Pseudomonas syringae pv. syringae B728a 0.63 Psyr_4275 DNA replication and repair protein RadA 0.67 Psyr_3251 Protein of unknown function DUF6 low > 86
Pseudomonas fluorescens SBW25-INTG 0.62 PFLU_RS26230 DNA repair protein RadA 0.66 PFLU_RS18835 DMT family transporter low > 109
Pseudomonas fluorescens FW300-N1B4 0.62 Pf1N1B4_2768 DNA repair protein RadA 0.61 Pf1N1B4_5821 Permease of the drug/metabolite transporter (DMT) superfamily low > 87
Pseudomonas fluorescens SBW25 0.62 PFLU_RS26230 DNA repair protein RadA 0.66 PFLU_RS18835 DMT family transporter low > 109
Pseudomonas fluorescens FW300-N2C3 0.62 AO356_15680 DNA repair protein RadA 0.57 AO356_23285 hypothetical protein low > 104
Pseudomonas fluorescens FW300-N2E2 0.62 Pf6N2E2_5076 DNA repair protein RadA 0.57 Pf6N2E2_540 Permease of the drug/metabolite transporter (DMT) superfamily low > 103
Pseudomonas simiae WCS417 0.62 PS417_24305 DNA repair protein RadA 0.66 PS417_16825 membrane protein low > 88
Pseudomonas sp. S08-1 0.62 OH686_16185 DNA repair protein RadA 0.13 OH686_18235 Permease of the drug/metabolite transporter (DMT) superfamily low > 80
Pseudomonas fluorescens FW300-N2E3 0.62 AO353_13980 DNA repair protein RadA 0.62 AO353_21475 hypothetical protein low > 101
Pseudomonas stutzeri RCH2 0.61 Psest_3401 DNA repair protein RadA 0.19 Psest_0918 Predicted permease, DMT superfamily low > 67
Pseudomonas putida KT2440 0.61 PP_4644 DNA repair enzyme 0.63 PP_2231 putative permease of the drug/metabolite transporter (DMT) superfamily low > 96
Dyella japonica UNC79MFTsu3.2 0.58 ABZR86_RS08845 DNA repair protein RadA 0.13 ABZR86_RS19250 DMT family transporter low > 74
Acinetobacter radioresistens SK82 0.58 MPMX26_02235 DNA repair protein RadA 0.45 MPMX26_02850 hypothetical protein low > 36
Rhodanobacter sp. FW510-T8 0.57 OKGIIK_09580 radA DNA repair protein RadA 0.13 OKGIIK_11490 Permease low > 52
Rhodanobacter denitrificans MT42 0.57 LRK55_RS02280 DNA repair protein RadA 0.13 LRK55_RS04485 DMT family transporter low > 63
Rhodanobacter denitrificans FW104-10B01 0.57 LRK54_RS02525 DNA repair protein RadA 0.13 LRK54_RS04705 DMT family transporter low > 59
Paraburkholderia sabiae LMG 24235 0.54 QEN71_RS06320 DNA repair protein RadA 0.18 QEN71_RS28530 DMT family transporter low > 153
Cupriavidus basilensis FW507-4G11 0.54 RR42_RS12030 DNA repair protein RadA 0.10 RR42_RS17845 multidrug DMT transporter permease — —
Burkholderia phytofirmans PsJN 0.53 BPHYT_RS12235 DNA repair protein RadA 0.17 BPHYT_RS18390 membrane protein low > 109
Variovorax sp. SCN45 0.52 GFF5087 DNA repair protein RadA 0.11 GFF5106 Permease of the drug/metabolite transporter (DMT) superfamily low > 127
Acidovorax sp. GW101-3H11 0.51 Ac3H11_3371 DNA repair protein RadA 0.12 Ac3H11_3329 Permease of the drug/metabolite transporter (DMT) superfamily low > 79
Rhizobium sp. OAE497 0.40 ABIE40_RS06280 DNA repair protein RadA 0.17 ABIE40_RS12950 DMT family transporter low > 107
Agrobacterium fabrum C58 0.40 Atu1077 DNA repair protein 0.15 Atu2199 permease low > 89
Sinorhizobium meliloti 1021 0.39 SMc00556 DNA repair protein RadA 0.15 SMc01584 hypothetical protein low > 103
Rhodospirillum rubrum S1H 0.39 Rru_A0406 DNA repair protein RadA (NCBI) 0.11 Rru_A2141 Protein of unknown function DUF6, transmembrane (NCBI) low > 58
Pedobacter sp. GW460-11-11-14-LB5 0.38 CA265_RS22660 DNA repair protein RadA 0.17 CA265_RS04580 EamA family transporter low > 88
Shewanella loihica PV-4 0.36 Shew_2807 DNA repair protein RadA (RefSeq) 0.14 Shew_1696 hypothetical protein (RefSeq) low > 60
Bifidobacterium breve UCC2003 0.35 BBR_RS18740 DNA repair protein RadA 0.20 BBR_RS19215 EamA/RhaT family transporter low > 34
Fusobacterium nucleatum SB010 0.32 HUW76_02270 DNA repair protein RadA 0.17 HUW76_04930 DMT family transporter 0.90 12

Not shown: 61 genomes with orthologs for IAI46_02945 only; 0 genomes with orthologs for IAI46_09020 only