| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Serratia liquefaciens MT49 | 1.0 | IAI46_01880 | | transcription elongation factor GreA | 1.0 | IAI46_00730 | | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | 0.63 | 2 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.89 | GFF2922 | | Transcription elongation factor GreA | 0.65 | GFF240 | | 'Putative FMN hydrolase (EC 3.1.3.-); 5-Amino-6-(5'-phosphoribitylamino)uracil phosphatase' transl_table=11 | low | > 78 |
| Klebsiella michiganensis M5al | 0.89 | BWI76_RS25160 | | transcription elongation factor GreA | 0.63 | BWI76_RS01215 | | flavin mononucleotide phosphatase | — | — |
| Rahnella sp. WP5 | 0.89 | EX31_RS08595 | | transcription elongation factor GreA | 0.60 | EX31_RS15170 | | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | low | > 89 |
| Escherichia fergusonii Becca | 0.88 | EFB2_00642 | | Transcription elongation factor GreA | 0.64 | EFB2_04825 | | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | low | > 86 |
| Escherichia coli BL21 | 0.88 | ECD_03046 | | transcript cleavage factor | 0.64 | ECD_03688 | | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase; pyrimidine phosphatase; riboflavin synthesis | low | > 60 |
| Escherichia coli ECRC101 | 0.88 | OKFHMN_18045 | greA | transcription elongation factor GreA | 0.64 | OKFHMN_14415 | yigB | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.88 | OHPLBJKB_00519 | | Transcription elongation factor GreA | 0.64 | OHPLBJKB_04238 | | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | low | > 73 |
| Escherichia coli ECRC99 | 0.88 | KEDOAH_10105 | greA | transcription elongation factor GreA | 0.64 | KEDOAH_13735 | yigB | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | — | — |
| Escherichia coli ECRC98 | 0.88 | JDDGAC_21670 | greA | transcription elongation factor GreA | 0.64 | JDDGAC_18040 | yigB | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | — | — |
| Escherichia coli ECOR27 | 0.88 | NOLOHH_09845 | greA | transcription elongation factor GreA | 0.64 | NOLOHH_06545 | yigB | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | — | — |
| Escherichia coli ECRC62 | 0.88 | BNILDI_01690 | greA | transcription elongation factor GreA | 0.64 | BNILDI_04990 | yigB | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | — | — |
| Escherichia coli Nissle 1917 | 0.88 | ECOLIN_RS18320 | | transcription elongation factor GreA | 0.64 | ECOLIN_RS21880 | | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | — | — |
| Enterobacter sp. TBS_079 | 0.88 | MPMX20_04085 | | Transcription elongation factor GreA | 0.64 | MPMX20_04464 | | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | low | > 85 |
| Pectobacterium carotovorum WPP14 | 0.88 | HER17_RS18330 | | transcription elongation factor GreA | 0.64 | HER17_RS01355 | | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | — | — |
| Escherichia coli ECRC102 | 0.88 | NIAGMN_15805 | greA | transcription elongation factor GreA | 0.64 | NIAGMN_12170 | yigB | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | — | — |
| Escherichia coli ECOR38 | 0.88 | HEPCGN_16920 | greA | transcription elongation factor GreA | 0.64 | HEPCGN_13120 | yigB | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | — | — |
| Escherichia coli BW25113 | 0.88 | b3181 | greA | transcription elongation factor: cleaves 3' nucleotide of paused mRNA (VIMSS) | 0.64 | b3812 | yigB | predicted hydrolase (NCBI) | low | > 76 |
| Enterobacter asburiae PDN3 | 0.88 | EX28DRAFT_3232 | | transcription elongation factor GreA | 0.65 | EX28DRAFT_4481 | | haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | low | > 76 |
| Escherichia coli ECRC101 | 0.88 | MCAODC_08565 | greA | transcription elongation factor GreA | 0.64 | MCAODC_04920 | yigB | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | — | — |
| Dickeya dadantii 3937 | 0.87 | DDA3937_RS03015 | | transcription elongation factor GreA | 0.63 | DDA3937_RS19885 | | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | — | — |
| Pantoea sp. MT58 | 0.86 | IAI47_17080 | | transcription elongation factor GreA | 0.63 | IAI47_18395 | | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | low | > 76 |
| Dickeya dianthicola 67-19 | 0.86 | HGI48_RS03185 | | transcription elongation factor GreA | 0.62 | HGI48_RS20040 | | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | low | > 71 |
| Dickeya dianthicola ME23 | 0.86 | DZA65_RS03180 | | transcription elongation factor GreA | 0.62 | DZA65_RS21085 | | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | low | > 75 |
| Erwinia tracheiphila SCR3 | 0.79 | LU632_RS21165 | greA | transcription elongation factor GreA | 0.65 | LU632_RS24130 | yigB | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | low | > 74 |
| Alteromonas macleodii MIT1002 | 0.74 | MIT1002_01468 | | Transcript cleavage factor GreA | 0.29 | MIT1002_00156 | | Flavin mononucleotide phosphatase YigB | low | > 70 |
| Shewanella oneidensis MR-1 | 0.72 | SO1191 | greA | transcription elongation factor GreA (NCBI ptt file) | 0.34 | SO4305 | | HAD-superfamily hydrolase, subfamily IA, variant 1 family protein (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.72 | Shewana3_1017 | | transcription elongation factor GreA (RefSeq) | 0.31 | Shewana3_0394 | | HAD family hydrolase (RefSeq) | low | > 73 |
| Shewanella amazonensis SB2B | 0.70 | Sama_0951 | | GreA/GreB family elongation factor (RefSeq) | 0.36 | Sama_3246 | | HAD-superfamily hydrolase, subfamily IA, variant 1 family protein (RefSeq) | low | > 62 |
| Kangiella aquimarina DSM 16071 | 0.69 | B158DRAFT_0617 | | transcription elongation factor GreA | 0.22 | B158DRAFT_0243 | | haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | low | > 40 |
| Shewanella loihica PV-4 | 0.69 | Shew_2837 | | transcription elongation factor GreA (RefSeq) | 0.32 | Shew_0326 | | HAD family hydrolase (RefSeq) | low | > 60 |
| Pseudomonas stutzeri RCH2 | 0.61 | Psest_0969 | | transcription elongation factor GreA | 0.23 | Psest_3768 | | haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | low | > 67 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.60 | Psyr_4190 | | transcription elongation factor GreA | 0.22 | Psyr_0186 | | HAD-superfamily hydrolase, subfamily IA, variant 3:HAD-superfamily hydrolase, subfamily IA, variant 1 | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.60 | Psyr_4190 | | transcription elongation factor GreA | 0.22 | Psyr_0186 | | HAD-superfamily hydrolase, subfamily IA, variant 3:HAD-superfamily hydrolase, subfamily IA, variant 1 | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.59 | AO353_05625 | | transcription elongation factor GreA | 0.25 | AO353_09055 | | HAD family hydrolase | low | > 101 |
| Pseudomonas fluorescens FW300-N1B4 | 0.59 | Pf1N1B4_1171 | | Transcription elongation factor GreA | 0.25 | Pf1N1B4_2170 | | Putative FMN hydrolase (EC 3.1.3.-); 5-Amino-6-(5'-phosphoribitylamino)uracil phosphatase | — | — |
| Pseudomonas fluorescens SBW25 | 0.59 | PFLU_RS25875 | | transcription elongation factor GreA | 0.25 | PFLU_RS29285 | | HAD-IA family hydrolase | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.59 | PFLU_RS25875 | | transcription elongation factor GreA | 0.25 | PFLU_RS29285 | | HAD-IA family hydrolase | low | > 109 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.59 | Xcc-8004.2911.1 | | Transcription elongation factor GreA | 0.21 | Xcc-8004.4953.1 | | Putative FMN hydrolase (EC 3.1.3.-); 5-Amino-6-(5'-phosphoribitylamino)uracil phosphatase | low | > 74 |
| Lysobacter sp. OAE881 | 0.58 | ABIE51_RS11610 | | transcription elongation factor GreA | 0.24 | ABIE51_RS03240 | | HAD-IA family hydrolase | low | > 62 |
| Pseudomonas sp. S08-1 | 0.58 | OH686_17085 | | Transcription elongation factor GreA | 0.21 | OH686_13780 | | 2-haloalkanoic acid dehalogenase | low | > 80 |
| Vibrio cholerae E7946 ATCC 55056 | 0.58 | CSW01_03330 | | transcription elongation factor GreA | 0.44 | CSW01_00655 | | 2-haloalkanoic acid dehalogenase | low | > 62 |
| Pseudomonas simiae WCS417 | 0.58 | PS417_24035 | | transcription elongation factor GreA | 0.26 | PS417_27600 | | HAD family hydrolase | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.58 | Pf6N2E2_3363 | | Transcription elongation factor GreA | 0.25 | Pf6N2E2_4415 | | Putative FMN hydrolase (EC 3.1.3.-); 5-Amino-6-(5'-phosphoribitylamino)uracil phosphatase | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.57 | PfGW456L13_5098 | | Transcription elongation factor GreA | 0.26 | PfGW456L13_841 | | Putative FMN hydrolase (EC 3.1.3.-); 5-Amino-6-(5'-phosphoribitylamino)uracil phosphatase | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.57 | AO356_07475 | | transcription elongation factor GreA | 0.25 | AO356_12720 | | HAD family hydrolase | — | — |
| Pseudomonas sp. RS175 | 0.56 | PFR28_00078 | | Transcription elongation factor GreA | 0.26 | PFR28_04379 | | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | — | — |
| Pseudomonas putida KT2440 | 0.56 | PP_4722 | | Transcription elongation factor GreA | 0.21 | PP_5231 | | putative (S)-2-haloacid dehalogenase | low | > 96 |
| Acidovorax sp. GW101-3H11 | 0.55 | Ac3H11_437 | | Transcription elongation factor GreA | 0.23 | Ac3H11_108 | | Hydrolase | low | > 79 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.54 | GFF4897 | | Transcription elongation factor GreA | 0.23 | GFF5114 | | Hydrolase | — | — |
| Variovorax sp. OAS795 | 0.52 | ABID97_RS17070 | | transcription elongation factor GreA | 0.23 | ABID97_RS17655 | | HAD-IA family hydrolase | low | > 91 |
| Herbaspirillum seropedicae SmR1 | 0.52 | HSERO_RS06930 | | transcription elongation factor GreA | 0.19 | HSERO_RS03050 | | hydrolase | — | — |
| Variovorax sp. SCN45 | 0.52 | GFF374 | | Transcription elongation factor GreA | 0.22 | GFF502 | | Hydrolase | low | > 127 |
| Dyella japonica UNC79MFTsu3.2 | 0.51 | ABZR86_RS05595 | | transcription elongation factor GreA | 0.22 | ABZR86_RS17535 | | HAD family hydrolase | low | > 74 |
| Rhodanobacter sp. FW510-T8 | 0.50 | OKGIIK_07290 | greA | transcription elongation factor GreA | 0.22 | OKGIIK_00140 | yigB | HAD family hydrolase | low | > 52 |
| Rhodanobacter denitrificans FW104-10B01 | 0.50 | LRK54_RS18005 | | transcription elongation factor GreA | 0.22 | LRK54_RS06440 | | HAD family hydrolase | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.50 | LRK55_RS17860 | | transcription elongation factor GreA | 0.22 | LRK55_RS06185 | | HAD family hydrolase | low | > 63 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.32 | CA264_03870 | | transcription elongation factor GreA | 0.12 | CA264_14185 | | noncanonical pyrimidine nucleotidase, YjjG family | low | > 74 |
Not shown: 40 genomes with orthologs for IAI46_01880 only; 0 genomes with orthologs for IAI46_00730 only