Conservation of cofitness between HSERO_RS01325 and HSERO_RS19885 in Herbaspirillum seropedicae SmR1

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS01325 cation/multidrug efflux protein 1.0 HSERO_RS19885 AsnC family transcriptional regulator 0.43 4
Paraburkholderia bryophila 376MFSha3.1 0.73 H281DRAFT_05197 Multidrug efflux pump subunit AcrB 0.59 H281DRAFT_02325 transcriptional regulator, AsnC family low > 103
Paraburkholderia graminis OAS925 0.72 ABIE53_002354 multidrug efflux pump 0.44 ABIE53_000011 Lrp/AsnC family leucine-responsive transcriptional regulator low > 113
Paraburkholderia sabiae LMG 24235 0.71 QEN71_RS07190 efflux RND transporter permease subunit 0.56 QEN71_RS23705 Lrp/AsnC family transcriptional regulator low > 153
Burkholderia phytofirmans PsJN 0.71 BPHYT_RS11375 acriflavin resistance protein 0.60 BPHYT_RS19770 ArsR family transcriptional regulator low > 109
Dyella japonica UNC79MFTsu3.2 0.67 ABZR86_RS11125 efflux RND transporter permease subunit 0.44 ABZR86_RS15320 Lrp/AsnC family transcriptional regulator low > 74
Pseudomonas fluorescens SBW25 0.50 PFLU_RS06185 efflux RND transporter permease subunit 0.57 PFLU_RS19350 Lrp/AsnC family transcriptional regulator low > 109
Pseudomonas fluorescens SBW25-INTG 0.50 PFLU_RS06185 efflux RND transporter permease subunit 0.57 PFLU_RS19350 Lrp/AsnC family transcriptional regulator low > 109
Pseudomonas stutzeri RCH2 0.50 Psest_1566 Cation/multidrug efflux pump 0.59 Psest_0920 Transcriptional regulators low > 67
Pseudomonas simiae WCS417 0.50 PS417_06115 multidrug transporter AcrB 0.57 PS417_17540 ArsR family transcriptional regulator — —
Pseudomonas fluorescens GW456-L13 0.50 PfGW456L13_4730 RND efflux transporter 0.57 PfGW456L13_3539 Transcriptional regulator BkdR of isoleucine and valine catabolism operon low > 87
Pseudomonas fluorescens FW300-N2E3 0.50 AO353_16365 multidrug transporter AcrB 0.58 AO353_26630 ArsR family transcriptional regulator low > 101
Pseudomonas fluorescens FW300-N1B4 0.49 Pf1N1B4_3063 RND efflux transporter 0.57 Pf1N1B4_4481 Transcriptional regulator BkdR of isoleucine and valine catabolism operon low > 87
Pseudomonas putida KT2440 0.49 PP_1517 RND efflux transporter 0.55 PP_4400 Bkd operon transcriptional regulator low > 96
Pseudomonas fluorescens FW300-N2C3 0.49 AO356_06130 multidrug transporter AcrB 0.57 AO356_22995 ArsR family transcriptional regulator low > 104
Pseudomonas fluorescens FW300-N2E2 0.49 Pf6N2E2_3091 RND efflux transporter 0.56 Pf6N2E2_482 Transcriptional regulator BkdR of isoleucine and valine catabolism operon low > 103
Pseudomonas sp. RS175 0.49 PFR28_00379 Cobalt-zinc-cadmium resistance protein CzcA 0.57 PFR28_02444 Leucine-responsive regulatory protein low > 88
Lysobacter sp. OAE881 0.48 ABIE51_RS17595 efflux RND transporter permease subunit 0.43 ABIE51_RS00930 Lrp/AsnC family transcriptional regulator low > 62
Azospirillum sp. SherDot2 0.48 MPMX19_05260 Cobalt-zinc-cadmium resistance protein CzcA 0.57 MPMX19_03171 Leucine-responsive regulatory protein low > 112
Ralstonia solanacearum IBSBF1503 0.46 RALBFv3_RS01385 AcrB/AcrD/AcrF family protein 0.45 RALBFv3_RS07680 Lrp/AsnC family transcriptional regulator low > 76
Ralstonia solanacearum UW163 0.46 UW163_RS14695 AcrB/AcrD/AcrF family protein 0.45 UW163_RS05945 Lrp/AsnC family transcriptional regulator — —
Ralstonia sp. UNC404CL21Col 0.46 ABZR87_RS13180 efflux RND transporter permease subunit 0.45 ABZR87_RS03390 Lrp/AsnC family transcriptional regulator 0.36 80
Cupriavidus basilensis FW507-4G11 0.46 RR42_RS07915 multidrug transporter AcrB 0.58 RR42_RS02930 AsnC family transcriptional regulator low > 128
Ralstonia solanacearum PSI07 0.46 RPSI07_RS16100 AcrB/AcrD/AcrF family protein 0.45 RPSI07_RS09580 Lrp/AsnC family transcriptional regulator low > 81
Ralstonia solanacearum GMI1000 0.46 RS_RS08335 AcrB/AcrD/AcrF family protein 0.45 RS_RS15580 Lrp/AsnC family transcriptional regulator low > 80
Rhodopseudomonas palustris CGA009 0.44 TX73_022880 efflux RND transporter permease subunit 0.39 TX73_021105 Lrp/AsnC family transcriptional regulator low > 86
Variovorax sp. SCN45 0.43 GFF493 RND efflux system, inner membrane transporter 0.61 GFF5454 Transcriptional regulator, AsnC family low > 127
Variovorax sp. OAS795 0.43 ABID97_RS17615 efflux RND transporter permease subunit 0.61 ABID97_RS01965 Lrp/AsnC family transcriptional regulator low > 91
Hydrogenophaga sp. GW460-11-11-14-LB1 0.43 GFF4033 Probable transmembrane drug efflux protein 0.58 GFF2700 Transcriptional regulator, AsnC family low > 90
Rhizobium sp. OAE497 0.42 ABIE40_RS17045 efflux RND transporter permease subunit 0.36 ABIE40_RS02530 Lrp/AsnC family transcriptional regulator low > 107
Agrobacterium fabrum C58 0.40 Atu5381 AcrB/AcrD/AcrF family protein 0.41 Atu4818 AsnC family transcriptional regulator — —
Bosea sp. OAE506 0.38 ABIE41_RS18635 efflux RND transporter permease subunit 0.44 ABIE41_RS21665 Lrp/AsnC family transcriptional regulator low > 77
Dickeya dadantii 3937 0.37 DDA3937_RS04730 efflux RND transporter permease subunit 0.42 DDA3937_RS21205 Lrp/AsnC family transcriptional regulator low > 74
Azospirillum brasilense Sp245 0.34 AZOBR_RS32765 multidrug transporter 0.57 AZOBR_RS23825 ArsR family transcriptional regulator low > 97
Caulobacter crescentus NA1000 0.34 CCNA_01866 cation/multidrug efflux pump acrB4 0.43 CCNA_02618 AsnC-family transcriptional regulator low > 66
Caulobacter crescentus NA1000 Δfur 0.34 CCNA_01866 cation/multidrug efflux pump acrB4 0.43 CCNA_02618 AsnC-family transcriptional regulator low > 67
Marinobacter adhaerens HP15 0.33 HP15_1118 transporter, AcrB/D/F family 0.41 HP15_2056 transcriptional regulator of AsnC/Lrp family protein low > 73
Shewanella loihica PV-4 0.25 Shew_0466 acriflavin resistance protein (RefSeq) 0.44 Shew_0301 AsnC family transcriptional regulator (RefSeq) low > 60
Shewanella amazonensis SB2B 0.25 Sama_0675 AcrB/AcrD/AcrF family transporter (RefSeq) 0.38 Sama_3419 AsnC family transcriptional regulator (RefSeq) low > 62
Dinoroseobacter shibae DFL-12 0.24 Dshi_1262 acriflavin resistance protein (RefSeq) 0.41 Dshi_0245 transcriptional regulator, AsnC family (RefSeq) low > 64
Phaeobacter inhibens DSM 17395 0.21 PGA1_c24610 integral membrane protein, AcrB/AcrD/AcrF family 0.44 PGA1_c20490 transcriptional regulator, AsnC family low > 62

Not shown: 28 genomes with orthologs for HSERO_RS01325 only; 8 genomes with orthologs for HSERO_RS19885 only