Conservation of cofitness between HSERO_RS03475 and HSERO_RS17170 in Herbaspirillum seropedicae SmR1

54 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS03475 NUDIX hydrolase 1.0 HSERO_RS17170 mammalian cell entry protein 0.38 2
Ralstonia solanacearum PSI07 0.59 RPSI07_RS11560 NUDIX hydrolase 0.51 RPSI07_RS20990 MCE family protein low > 81
Ralstonia solanacearum UW163 0.59 UW163_RS07885 NUDIX hydrolase 0.51 UW163_RS01285 MCE family protein — —
Ralstonia solanacearum IBSBF1503 0.59 RALBFv3_RS05740 NUDIX hydrolase 0.51 RALBFv3_RS12320 MCE family protein low > 76
Ralstonia solanacearum GMI1000 0.59 RS_RS13630 NUDIX hydrolase 0.51 RS_RS03005 MCE family protein low > 80
Paraburkholderia graminis OAS925 0.59 ABIE53_000811 8-oxo-dGTP pyrophosphatase MutT (NUDIX family) 0.54 ABIE53_000820 paraquat-inducible protein B low > 113
Variovorax sp. SCN45 0.58 GFF4911 Nudix-like NDP and NTP phosphohydrolase NudJ 0.66 GFF1389 Paraquat-inducible protein B low > 127
Paraburkholderia bryophila 376MFSha3.1 0.57 H281DRAFT_04652 ADP-ribose pyrophosphatase YjhB, NUDIX family 0.54 H281DRAFT_04660 paraquat-inducible protein B low > 103
Ralstonia sp. UNC404CL21Col 0.56 ABZR87_RS01335 NUDIX hydrolase 0.53 ABZR87_RS08260 intermembrane transport protein PqiB low > 80
Paraburkholderia sabiae LMG 24235 0.56 QEN71_RS26735 NUDIX hydrolase 0.53 QEN71_RS26690 MlaD family protein low > 153
Cupriavidus basilensis FW507-4G11 0.56 RR42_RS17470 NUDIX hydrolase 0.59 RR42_RS03885 mammalian cell entry protein low > 128
Variovorax sp. OAS795 0.55 ABID97_RS04420 NUDIX hydrolase 0.67 ABID97_RS15885 MlaD family protein low > 91
Burkholderia phytofirmans PsJN 0.54 BPHYT_RS03365 NUDIX hydrolase 0.55 BPHYT_RS03460 mammalian cell entry protein low > 109
Dechlorosoma suillum PS 0.52 Dsui_3338 Zn-finger containing NTP pyrophosphohydrolase 0.44 Dsui_2289 qaraquat-inducible protein B low > 51
Pseudomonas fluorescens SBW25 0.42 PFLU_RS18575 NUDIX hydrolase 0.43 PFLU_RS04610 MCE family protein 0.39 57
Pseudomonas fluorescens SBW25-INTG 0.42 PFLU_RS18575 NUDIX hydrolase 0.43 PFLU_RS04610 MCE family protein low > 109
Dyella japonica UNC79MFTsu3.2 0.41 ABZR86_RS02190 NUDIX hydrolase 0.48 ABZR86_RS09120 MlaD family protein low > 74
Pseudomonas fluorescens GW456-L13 0.41 PfGW456L13_2640 Nudix-like NDP and NTP phosphohydrolase YmfB 0.42 PfGW456L13_3226 Paraquat-inducible protein B low > 87
Pseudomonas fluorescens FW300-N2C3 0.40 AO356_22115 NUDIX hydrolase 0.43 AO356_01345 mammalian cell entry protein low > 104
Pseudomonas sp. RS175 0.40 PFR28_02618 Phosphatase NudJ 0.44 PFR28_01295 Intermembrane transport protein PqiB low > 88
Pseudomonas fluorescens FW300-N2E3 0.40 AO353_27700 NUDIX hydrolase 0.41 AO353_29375 mammalian cell entry protein low > 101
Pseudomonas fluorescens FW300-N2E2 0.39 Pf6N2E2_287 Nudix-like NDP and NTP phosphohydrolase YmfB 0.43 Pf6N2E2_2141 Paraquat-inducible protein B low > 103
Pseudomonas syringae pv. syringae B728a 0.39 Psyr_3189 NUDIX hydrolase 0.48 Psyr_3045 PqiB family protein low > 86
Pseudomonas fluorescens FW300-N1B4 0.39 Pf1N1B4_4049 Nudix-like NDP and NTP phosphohydrolase YmfB 0.43 Pf1N1B4_4821 Paraquat-inducible protein B — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.39 Psyr_3189 NUDIX hydrolase 0.48 Psyr_3045 PqiB family protein low > 86
Rhodanobacter denitrificans MT42 0.38 LRK55_RS00170 NUDIX hydrolase 0.47 LRK55_RS02545 MlaD family protein low > 63
Rhodanobacter sp. FW510-T8 0.38 OKGIIK_06880 Phosphatase NudJ 0.47 OKGIIK_09825 Mammalian cell entry protein low > 52
Pseudomonas putida KT2440 0.37 PP_4013 MutT/nudix family protein 0.42 PP_2577 putative paraquat-inducible protein B (pqiB like) low > 96
Rhodanobacter denitrificans FW104-10B01 0.37 LRK54_RS00430 NUDIX hydrolase 0.47 LRK54_RS02790 MlaD family protein low > 59
Rahnella sp. WP5 0.29 EX31_RS24580 NUDIX hydrolase 0.44 EX31_RS00480 MCE family protein low > 89
Shewanella sp. ANA-3 0.29 Shewana3_1748 NUDIX hydrolase (RefSeq) 0.25 Shewana3_1920 hypothetical protein (RefSeq) low > 73
Escherichia coli Nissle 1917 0.24 ECOLIN_RS06630 phosphatase NudJ 0.26 ECOLIN_RS04995 intermembrane transport protein PqiB — —
Escherichia coli BL21 0.24 ECD_01132 bifunctional thiamine pyrimidine pyrophosphate hydrolase and thiamine pyrophosphate hydrolase 0.26 ECD_00955 paraquat-inducible, SoxRS-regulated MCE domain protein — —
Escherichia coli ECRC98 0.24 JDDGAC_06615 nudJ phosphatase NudJ 0.26 JDDGAC_08875 pqiB intermembrane transport protein PqiB low > 86
Escherichia coli BW25113 0.24 b1134 ymfB bifunctional thiamin pyrimidine pyrophosphate hydrolase/ thiamin pyrophosphate hydrolase (NCBI) 0.26 b0951 pqiB paraquat-inducible protein B (NCBI) low > 76
Escherichia coli ECRC100 0.24 OKFHMN_00750 nudJ phosphatase NudJ 0.26 OKFHMN_05265 pqiB intermembrane transport protein PqiB low > 80
Escherichia fergusonii Becca 0.24 EFB2_02841 Phosphatase NudJ 0.26 EFB2_03120 Intermembrane transport protein PqiB low > 86
Escherichia coli ECRC62 0.24 BNILDI_19060 nudJ phosphatase NudJ 0.26 BNILDI_19985 pqiB intermembrane transport protein PqiB low > 75
Escherichia coli ECRC102 0.24 NIAGMN_24895 nudJ phosphatase NudJ 0.26 NIAGMN_02985 pqiB intermembrane transport protein PqiB — —
Escherichia coli ECOR27 0.24 NOLOHH_20895 nudJ phosphatase NudJ 0.26 NOLOHH_21820 pqiB intermembrane transport protein PqiB low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.24 OHPLBJKB_02534 Phosphatase NudJ 0.26 OHPLBJKB_02715 Paraquat-inducible protein B low > 73
Escherichia coli ECRC99 0.24 KEDOAH_24835 nudJ phosphatase NudJ 0.26 KEDOAH_22470 pqiB intermembrane transport protein PqiB — —
Escherichia coli ECOR38 0.24 HEPCGN_24225 nudJ phosphatase NudJ 0.26 HEPCGN_23255 pqiB intermembrane transport protein PqiB low > 87
Escherichia coli ECRC101 0.24 MCAODC_22335 nudJ phosphatase NudJ 0.26 MCAODC_24655 pqiB intermembrane transport protein PqiB low > 87
Enterobacter sp. TBS_079 0.24 MPMX20_01818 Phosphatase NudJ 0.25 MPMX20_01602 Intermembrane transport protein PqiB low > 85
Klebsiella michiganensis M5al 0.23 BWI76_RS11320 NUDIX hydrolase 0.26 BWI76_RS09940 paraquat-inducible protein B — —
Enterobacter asburiae PDN3 0.23 EX28DRAFT_1796 ADP-ribose pyrophosphatase 0.25 EX28DRAFT_1992 Paraquat-inducible protein B low > 76
Serratia liquefaciens MT49 0.23 IAI46_10445 NUDIX hydrolase 0.28 IAI46_08835 intermembrane transport protein PqiB low > 86
Erwinia tracheiphila SCR3 0.23 LU632_RS14570 NUDIX hydrolase 0.26 LU632_RS09980 pqiB intermembrane transport protein PqiB low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.22 GFF3419 Nudix-like NDP and NTP phosphohydrolase YmfB 0.26 GFF3242 Paraquat-inducible protein B low > 78
Pectobacterium carotovorum WPP14 0.22 HER17_RS11620 NUDIX hydrolase 0.42 HER17_RS13900 MlaD family protein low > 75
Dickeya dadantii 3937 0.22 DDA3937_RS11480 NUDIX hydrolase 0.40 DDA3937_RS10765 MCE family protein low > 74
Dickeya dianthicola 67-19 0.22 HGI48_RS11525 NUDIX hydrolase 0.25 HGI48_RS12895 intermembrane transport protein PqiB low > 71
Dickeya dianthicola ME23 0.22 DZA65_RS11860 NUDIX hydrolase 0.25 DZA65_RS13360 intermembrane transport protein PqiB low > 75
Pantoea sp. MT58 0.21 IAI47_11910 NUDIX hydrolase 0.26 IAI47_12675 intermembrane transport protein PqiB low > 76

Not shown: 13 genomes with orthologs for HSERO_RS03475 only; 7 genomes with orthologs for HSERO_RS17170 only