Conservation of cofitness between HSERO_RS07150 and HSERO_RS16375 in Herbaspirillum seropedicae SmR1

56 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS07150 apolipoprotein acyltransferase 1.0 HSERO_RS16375 cupin 0.45 5
Paraburkholderia sabiae LMG 24235 0.68 QEN71_RS26550 carbon-nitrogen hydrolase family protein 0.52 QEN71_RS06070 cupin domain-containing protein low > 153
Paraburkholderia bryophila 376MFSha3.1 0.68 H281DRAFT_04689 nitrilase 0.50 H281DRAFT_00534 50S ribosomal protein L16 3-hydroxylase low > 103
Burkholderia phytofirmans PsJN 0.68 BPHYT_RS03545 apolipoprotein acyltransferase 0.51 BPHYT_RS12490 cupin low > 109
Paraburkholderia graminis OAS925 0.68 ABIE53_000852 putative amidohydrolase 0.51 ABIE53_002722 50S ribosomal protein L16 3-hydroxylase 0.21 99
Cupriavidus basilensis FW507-4G11 0.64 RR42_RS05880 acyltransferase 0.50 RR42_RS06270 cupin low > 128
Ralstonia solanacearum GMI1000 0.62 RS_RS13310 carbon-nitrogen hydrolase family protein 0.50 RS_RS05720 cupin domain-containing protein — —
Castellaniella sp019104865 MT123 0.62 ABCV34_RS02585 carbon-nitrogen hydrolase family protein 0.43 ABCV34_RS00265 cupin domain-containing protein low > 48
Ralstonia solanacearum PSI07 0.62 RPSI07_RS11855 carbon-nitrogen hydrolase family protein 0.51 RPSI07_RS18455 cupin domain-containing protein low > 81
Ralstonia solanacearum IBSBF1503 0.61 RALBFv3_RS05450 carbon-nitrogen hydrolase family protein 0.50 RALBFv3_RS14905 cupin domain-containing protein — —
Ralstonia solanacearum UW163 0.61 UW163_RS08175 carbon-nitrogen hydrolase family protein 0.50 UW163_RS12375 cupin domain-containing protein — —
Ralstonia sp. UNC404CL21Col 0.61 ABZR87_RS01100 carbon-nitrogen hydrolase family protein 0.48 ABZR87_RS10565 cupin domain-containing protein 0.36 58
Hydrogenophaga sp. GW460-11-11-14-LB1 0.53 GFF2535 FIG003879: Predicted amidohydrolase 0.46 GFF5569 FIG002776: hypothetical protein low > 90
Acidovorax sp. GW101-3H11 0.51 Ac3H11_1207 FIG003879: Predicted amidohydrolase 0.48 Ac3H11_282 FIG074102: hypothetical protein low > 79
Variovorax sp. SCN45 0.50 GFF5445 FIG003879: Uncharacterized subgroup of the nitrilase superfamily 0.46 GFF2745 FIG074102: hypothetical protein low > 127
Variovorax sp. OAS795 0.49 ABID97_RS02000 carbon-nitrogen hydrolase family protein 0.45 ABID97_RS20150 cupin domain-containing protein low > 91
Pseudomonas sp. S08-1 0.44 OH686_08585 Uncharacterized subgroup of the nitrilase superfamily 0.32 OH686_00190 hypothetical protein — —
Alteromonas macleodii MIT1002 0.42 MIT1002_00226 (R)-stereoselective amidase 0.25 MIT1002_01824 50S ribosomal protein L16 arginine hydroxylase low > 70
Pseudomonas sp. RS175 0.41 PFR28_00160 Deaminated glutathione amidase 0.32 PFR28_02622 50S ribosomal protein L16 3-hydroxylase — —
Pseudomonas fluorescens GW456-L13 0.41 PfGW456L13_5027 FIG003879: Predicted amidohydrolase / Omega amidase (Nit2 homolog) 0.32 PfGW456L13_2636 FIG002776: hypothetical protein 0.27 86
Marinobacter adhaerens HP15 0.41 HP15_2449 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 0.31 HP15_2089 cupin 4 family protein — —
Shewanella loihica PV-4 0.39 Shew_0409 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (RefSeq) 0.25 Shew_1557 cupin 4 family protein (RefSeq) low > 60
Kangiella aquimarina DSM 16071 0.38 B158DRAFT_2071 Predicted amidohydrolase 0.28 B158DRAFT_2496 Uncharacterized conserved protein low > 40
Serratia liquefaciens MT49 0.37 IAI46_22690 carbon-nitrogen hydrolase family protein 0.26 IAI46_02005 cupin domain-containing protein low > 86
Shewanella sp. ANA-3 0.35 Shewana3_3642 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (RefSeq) 0.25 Shewana3_1744 cupin 4 family protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.34 SO4092 hydrolase, carbon-nitrogen family (NCBI ptt file) 0.25 SO2636 conserved hypothetical protein (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.33 Sama_0473 carbon-nitrogen family hydrolase (RefSeq) 0.22 Sama_2065 cupin 4 (RefSeq) low > 62
Acinetobacter radioresistens SK82 0.33 MPMX26_00580 Deaminated glutathione amidase 0.24 MPMX26_01736 putative ribosomal oxygenase low > 36
Erwinia tracheiphila SCR3 0.24 LU632_RS16420 deaminated glutathione amidase 0.26 LU632_RS14600 cupin domain-containing protein low > 74
Pantoea sp. MT58 0.21 IAI47_14065 deaminated glutathione amidase 0.27 IAI47_11940 cupin domain-containing protein low > 76
Dickeya dianthicola 67-19 0.21 HGI48_RS19475 deaminated glutathione amidase 0.27 HGI48_RS14985 cupin domain-containing protein low > 71
Klebsiella michiganensis M5al 0.21 BWI76_RS07990 carbon-nitrogen hydrolase 0.26 BWI76_RS11270 50S ribosomal protein L16 arginine hydroxylase — —
Enterobacter asburiae PDN3 0.21 EX28DRAFT_2337 Predicted amidohydrolase 0.27 EX28DRAFT_3510 Uncharacterized conserved protein low > 76
Escherichia coli ECRC62 0.20 BNILDI_21795 tatE deaminated glutathione amidase 0.27 BNILDI_19090 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase low > 75
Escherichia coli ECRC101 0.19 MCAODC_26625 tatE deaminated glutathione amidase 0.27 MCAODC_22450 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase low > 87
Escherichia coli ECOR27 0.19 NOLOHH_23785 tatE deaminated glutathione amidase 0.27 NOLOHH_20925 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase low > 75
Escherichia coli BL21 0.19 ECD_00595 putative NAD(P)-binding amidase-type enzyme YbeM (C-N hydrolase family) 0.27 ECD_01126 50S ribosomal protein L16 arginine hydroxylase; 2-oxoglutarate oxygenase low > 61
Escherichia coli ECRC99 0.19 KEDOAH_20560 tatE deaminated glutathione amidase 0.27 KEDOAH_24720 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase — —
Escherichia coli ECRC100 0.19 OKFHMN_07410 tatE deaminated glutathione amidase 0.27 OKFHMN_00635 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase low > 80
Escherichia coli ECRC102 0.19 NIAGMN_05465 tatE deaminated glutathione amidase 0.27 NIAGMN_24760 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase — —
Escherichia coli ECRC98 0.19 JDDGAC_11055 tatE deaminated glutathione amidase 0.27 JDDGAC_06730 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase low > 86
Escherichia coli ECOR38 0.19 HEPCGN_00865 tatE deaminated glutathione amidase 0.27 HEPCGN_24085 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.19 OHPLBJKB_03080 Deaminated glutathione amidase 0.27 OHPLBJKB_02540 50S ribosomal protein L16 3-hydroxylase low > 73
Escherichia coli Nissle 1917 0.19 ECOLIN_RS03410 deaminated glutathione amidase 0.27 ECOLIN_RS06500 [50S ribosomal protein L16]-arginine 3-hydroxylase — —
Rahnella sp. WP5 0.19 EX31_RS23065 deaminated glutathione amidase 0.26 EX31_RS23850 cupin domain-containing protein low > 89
Escherichia fergusonii Becca 0.19 EFB2_03466 Deaminated glutathione amidase 0.27 EFB2_02847 50S ribosomal protein L16 3-hydroxylase low > 86
Enterobacter sp. TBS_079 0.18 MPMX20_01285 Deaminated glutathione amidase 0.27 MPMX20_00604 50S ribosomal protein L16 3-hydroxylase low > 85
Pectobacterium carotovorum WPP14 0.18 HER17_RS17575 deaminated glutathione amidase 0.26 HER17_RS19385 cupin domain-containing protein low > 75
Dickeya dadantii 3937 0.18 DDA3937_RS06130 deaminated glutathione amidase 0.27 DDA3937_RS14865 cupin domain-containing protein low > 74
Dickeya dianthicola ME23 0.18 DZA65_RS06520 deaminated glutathione amidase 0.27 DZA65_RS15735 cupin domain-containing protein low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.16 GFF4538 Aliphatic amidase AmiE (EC 3.5.1.4) 0.27 GFF3413 FIG002776: hypothetical protein low > 78
Lysobacter sp. OAE881 0.15 ABIE51_RS09320 carbon-nitrogen hydrolase 0.29 ABIE51_RS09000 cupin domain-containing protein — —
Dyella japonica UNC79MFTsu3.2 0.13 ABZR86_RS02765 carbon-nitrogen hydrolase 0.30 ABZR86_RS05910 cupin domain-containing protein — —
Rhodanobacter denitrificans FW104-10B01 0.13 LRK54_RS00340 carbon-nitrogen hydrolase 0.26 LRK54_RS00940 cupin domain-containing protein — —
Escherichia coli BW25113 0.12 b0219 yafV predicted C-N hydrolase family amidase, NAD(P)-binding (NCBI) 0.27 b1128 ycfD orf, hypothetical protein (VIMSS) low > 76
Rhodanobacter denitrificans MT42 0.12 LRK55_RS00030 carbon-nitrogen hydrolase 0.26 LRK55_RS00715 cupin domain-containing protein — —
Rhodanobacter sp. FW510-T8 0.12 OKGIIK_06395 nit2 amidohydrolase 0.27 OKGIIK_05950 roxA transcription factor low > 52

Not shown: 36 genomes with orthologs for HSERO_RS07150 only; 0 genomes with orthologs for HSERO_RS16375 only