Conservation of cofitness between HSERO_RS04345 and HSERO_RS01550 in Herbaspirillum seropedicae SmR1

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS04345 membrane protein 1.0 HSERO_RS01550 hypothetical protein 0.26 17
Paraburkholderia sabiae LMG 24235 0.64 QEN71_RS15210 NAD(P)/FAD-dependent oxidoreductase 0.52 QEN71_RS21200 DUF1993 domain-containing protein low > 153
Cupriavidus basilensis FW507-4G11 0.63 RR42_RS14990 membrane protein 0.52 RR42_RS11405 hypothetical protein low > 128
Paraburkholderia graminis OAS925 0.62 ABIE53_004862 putative Rossmann fold flavoprotein 0.53 ABIE53_005398 hypothetical protein low > 113
Burkholderia phytofirmans PsJN 0.61 BPHYT_RS33560 membrane protein 0.53 BPHYT_RS23690 hypothetical protein low > 109
Ralstonia solanacearum GMI1000 0.61 RS_RS11135 NAD(P)/FAD-dependent oxidoreductase 0.40 RS_RS24560 DUF1993 domain-containing protein low > 80
Ralstonia solanacearum IBSBF1503 0.61 RALBFv3_RS03690 NAD(P)/FAD-dependent oxidoreductase 0.37 RALBFv3_RS16470 DUF1993 domain-containing protein low > 76
Paraburkholderia bryophila 376MFSha3.1 0.61 H281DRAFT_06012 hypothetical protein 0.54 H281DRAFT_03469 hypothetical protein low > 103
Ralstonia sp. UNC404CL21Col 0.60 ABZR87_RS15620 NAD(P)/FAD-dependent oxidoreductase 0.42 ABZR87_RS09850 DUF1993 family protein low > 80
Hydrogenophaga sp. GW460-11-11-14-LB1 0.59 GFF3659 NAD(FAD)-utilizing dehydrogenases 0.46 GFF3731 FIG00956224: hypothetical protein — —
Castellaniella sp019104865 MT123 0.58 ABCV34_RS08895 NAD(P)/FAD-dependent oxidoreductase 0.48 ABCV34_RS11815 DUF1993 domain-containing protein low > 48
Acidovorax sp. GW101-3H11 0.57 Ac3H11_3253 NAD(FAD)-utilizing dehydrogenases 0.40 Ac3H11_4931 hypothetical protein low > 79
Variovorax sp. SCN45 0.57 GFF4713 Uncharacterized protein YhiN 0.53 GFF506 hypothetical protein low > 127
Variovorax sp. OAS795 0.55 ABID97_RS20650 NAD(P)/FAD-dependent oxidoreductase 0.54 ABID97_RS17665 DUF1993 domain-containing protein low > 91
Rhodanobacter sp. FW510-T8 0.52 OKGIIK_03505 yhiN NAD(P)/FAD-dependent oxidoreductase 0.43 OKGIIK_12845 DUF1993 domain-containing protein low > 52
Rhizobium sp. OAE497 0.51 ABIE40_RS03215 NAD(P)/FAD-dependent oxidoreductase 0.43 ABIE40_RS18870 DUF1993 domain-containing protein low > 107
Caulobacter crescentus NA1000 0.50 CCNA_01545 NAD(FAD)-utilizing dehydrogenase 0.43 CCNA_03769 hypothetical protein low > 66
Rhodanobacter denitrificans MT42 0.50 LRK55_RS14395 NAD(P)/FAD-dependent oxidoreductase 0.42 LRK55_RS10735 DUF1993 domain-containing protein low > 63
Caulobacter crescentus NA1000 Δfur 0.50 CCNA_01545 NAD(FAD)-utilizing dehydrogenase 0.43 CCNA_03769 hypothetical protein low > 67
Rhodanobacter denitrificans FW104-10B01 0.50 LRK54_RS14680 NAD(P)/FAD-dependent oxidoreductase 0.42 LRK54_RS11030 DUF1993 domain-containing protein low > 59
Lysobacter sp. OAE881 0.49 ABIE51_RS09810 NAD(P)/FAD-dependent oxidoreductase 0.43 ABIE51_RS11255 DUF1993 domain-containing protein low > 62
Shewanella sp. ANA-3 0.48 Shewana3_0055 hypothetical protein (RefSeq) 0.28 Shewana3_0239 hypothetical protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.48 SO0054 conserved hypothetical protein TIGR00275 (NCBI ptt file) 0.28 SO4492 conserved hypothetical protein (NCBI ptt file) low > 76
Dyella japonica UNC79MFTsu3.2 0.48 ABZR86_RS00415 NAD(P)/FAD-dependent oxidoreductase 0.43 ABZR86_RS16855 DUF1993 family protein low > 74
Rahnella sp. WP5 0.48 EX31_RS05140 NAD(P)/FAD-dependent oxidoreductase 0.49 EX31_RS21075 DUF1993 domain-containing protein low > 89
Pseudomonas sp. RS175 0.47 PFR28_04173 hypothetical protein 0.45 PFR28_01213 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N1B4 0.47 Pf1N1B4_2411 FIG00953568: hypothetical protein 0.45 Pf1N1B4_3933 FIG00956224: hypothetical protein — —
Pseudomonas simiae WCS417 0.47 PS417_26375 membrane protein 0.45 PS417_10430 hypothetical protein — —
Pseudomonas fluorescens SBW25-INTG 0.46 PFLU_RS28025 NAD(P)/FAD-dependent oxidoreductase 0.45 PFLU_RS10505 DUF1993 domain-containing protein low > 109
Brevundimonas sp. GW460-12-10-14-LB2 0.46 A4249_RS12180 NAD(P)/FAD-dependent oxidoreductase 0.39 A4249_RS13985 DUF1993 domain-containing protein low > 48
Pseudomonas fluorescens SBW25 0.46 PFLU_RS28025 NAD(P)/FAD-dependent oxidoreductase 0.45 PFLU_RS10505 DUF1993 domain-containing protein low > 109
Pseudomonas fluorescens FW300-N2E2 0.46 Pf6N2E2_4672 FIG00953568: hypothetical protein 0.45 Pf6N2E2_2231 FIG00956224: hypothetical protein low > 103
Pseudomonas fluorescens FW300-N2E3 0.46 AO353_07855 hypothetical protein 0.45 AO353_20100 hypothetical protein low > 101
Pseudomonas fluorescens FW300-N2C3 0.46 AO356_13765 hypothetical protein 0.45 AO356_01820 hypothetical protein low > 104
Pseudomonas fluorescens GW456-L13 0.45 PfGW456L13_1077 FIG00953568: hypothetical protein 0.43 PfGW456L13_2540 FIG00956224: hypothetical protein low > 87
Pseudomonas syringae pv. syringae B728a 0.45 Psyr_0515 HI0933-like protein 0.44 Psyr_2420 conserved hypothetical protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.45 Psyr_0515 HI0933-like protein 0.44 Psyr_2420 conserved hypothetical protein low > 86
Pseudomonas sp. S08-1 0.45 OH686_10655 Uncharacterized protein YhiN 0.48 OH686_00745 hypothetical protein low > 80
Pseudomonas putida KT2440 0.44 PP_4953 putative oxidoreductase with FAD/NAD(P)-binding domain 0.24 PP_5531 conserved protein of unknown function low > 96

Not shown: 48 genomes with orthologs for HSERO_RS04345 only; 1 genomes with orthologs for HSERO_RS01550 only