Conservation of cofitness between HGI48_RS16990 and HGI48_RS18055 in Dickeya dianthicola 67-19

54 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dickeya dianthicola 67-19 1.0 HGI48_RS16990 sulfate adenylyltransferase subunit CysN 1.0 HGI48_RS18055 2-isopropylmalate synthase 0.71 18
Dickeya dianthicola ME23 1.00 DZA65_RS18065 sulfate adenylyltransferase subunit CysN 1.00 DZA65_RS19200 2-isopropylmalate synthase 0.69 31
Dickeya dadantii 3937 0.96 DDA3937_RS16920 sulfate adenylyltransferase subunit CysN 0.99 DDA3937_RS18115 2-isopropylmalate synthase low > 74
Pectobacterium carotovorum WPP14 0.89 HER17_RS04290 sulfate adenylyltransferase subunit CysN 0.91 HER17_RS03085 2-isopropylmalate synthase 0.90 23
Rahnella sp. WP5 0.85 EX31_RS07875 sulfate adenylyltransferase subunit CysN 0.81 EX31_RS03680 2-isopropylmalate synthase 0.94 12
Serratia liquefaciens MT49 0.83 IAI46_03720 sulfate adenylyltransferase subunit CysN 0.84 IAI46_03355 2-isopropylmalate synthase low > 86
Escherichia coli BL21 0.81 ECD_02601 sulfate adenylyltransferase, subunit 1 0.86 ECD_00076 2-isopropylmalate synthase 0.72 26
Escherichia fergusonii Becca 0.81 EFB2_01159 Sulfate adenylyltransferase subunit 1 0.86 EFB2_03971 2-isopropylmalate synthase low > 86
Escherichia coli Nissle 1917 0.81 ECOLIN_RS15380 sulfate adenylyltransferase subunit CysN 0.86 ECOLIN_RS00400 2-isopropylmalate synthase low > 55
Escherichia coli BW25113 0.81 b2751 cysN sulfate adenylyltransferase subunit 1 (NCBI) 0.86 b0074 leuA 2-isopropylmalate synthase (NCBI) 0.89 11
Enterobacter sp. TBS_079 0.81 MPMX20_03637 Sulfate adenylyltransferase subunit 1 0.85 MPMX20_00769 2-isopropylmalate synthase 0.53 13
Escherichia coli ECOR38 0.81 HEPCGN_19625 cysN sulfate adenylyltransferase subunit CysN 0.86 HEPCGN_08695 2-isopropylmalate synthase 0.97 5
Escherichia coli ECRC101 0.81 MCAODC_10970 cysN sulfate adenylyltransferase subunit CysN 0.86 MCAODC_01230 2-isopropylmalate synthase 0.95 16
Escherichia coli ECRC98 0.81 JDDGAC_24110 cysN sulfate adenylyltransferase subunit CysN 0.86 JDDGAC_14310 2-isopropylmalate synthase low > 86
Escherichia coli ECRC99 0.81 KEDOAH_07695 cysN sulfate adenylyltransferase subunit CysN 0.86 KEDOAH_17440 2-isopropylmalate synthase — —
Escherichia coli ECRC100 0.81 OKFHMN_20445 cysN sulfate adenylyltransferase subunit CysN 0.86 OKFHMN_10715 2-isopropylmalate synthase 0.98 14
Escherichia coli ECRC102 0.81 NIAGMN_18215 cysN sulfate adenylyltransferase subunit CysN 0.86 NIAGMN_08565 2-isopropylmalate synthase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.81 OHPLBJKB_00982 Sulfate adenylyltransferase subunit 1 0.86 OHPLBJKB_03583 2-isopropylmalate synthase low > 73
Pantoea sp. MT58 0.81 IAI47_04185 sulfate adenylyltransferase subunit CysN 0.81 IAI47_16000 2-isopropylmalate synthase 0.81 10
Escherichia coli ECRC62 0.81 BNILDI_10810 cysN sulfate adenylyltransferase subunit CysN 0.86 BNILDI_08550 2-isopropylmalate synthase 0.99 1
Escherichia coli ECOR27 0.81 NOLOHH_12260 cysN sulfate adenylyltransferase subunit CysN 0.86 NOLOHH_03060 2-isopropylmalate synthase 0.92 6
Erwinia tracheiphila SCR3 0.81 LU632_RS06430 cysN sulfate adenylyltransferase subunit CysN 0.83 LU632_RS02880 leuA 2-isopropylmalate synthase low > 74
Enterobacter asburiae PDN3 0.80 EX28DRAFT_2847 sulfate adenylyltransferase, large subunit 0.85 EX28DRAFT_3670 2-isopropylmalate synthase (EC 2.3.3.13) 0.71 45
Klebsiella michiganensis M5al 0.80 BWI76_RS22695 sulfate adenylyltransferase 0.86 BWI76_RS04680 2-isopropylmalate synthase 0.61 20
Vibrio cholerae E7946 ATCC 55056 0.65 CSW01_12955 sulfate adenylyltransferase 0.70 CSW01_12595 2-isopropylmalate synthase low > 62
Shewanella sp. ANA-3 0.60 Shewana3_0864 cysN sulfate adenylyltransferase subunit 1 (RefSeq) 0.66 Shewana3_3761 2-isopropylmalate synthase (RefSeq) 0.90 32
Shewanella amazonensis SB2B 0.60 Sama_2890 Sulfate adenylyltransferase (RefSeq) 0.68 Sama_0335 2-isopropylmalate synthase (RefSeq) 0.92 40
Shewanella oneidensis MR-1 0.59 SO3726 cysN sulfate adenylyltransferase, subunit 1 (NCBI ptt file) 0.66 SO4236 leuA 2-isopropylmalate synthase (NCBI ptt file) 0.97 11
Shewanella loihica PV-4 0.56 Shew_1423 sulfate adenylyltransferase, large subunit (RefSeq) 0.66 Shew_3472 2-isopropylmalate synthase (RefSeq) 0.78 31
Alteromonas macleodii MIT1002 0.55 MIT1002_01271 Sulfate adenylyltransferase subunit 1 0.60 MIT1002_00949 2-isopropylmalate synthase — —
Parabacteroides merdae CL09T00C40 0.46 HMPREF1078_RS01710 sulfate adenylyltransferase subunit CysN 0.44 HMPREF1078_RS16665 2-isopropylmalate synthase low > 61
Bacteroides stercoris CC31F 0.46 HMPREF1181_RS04300 sulfate adenylyltransferase subunit CysN 0.43 HMPREF1181_RS14150 2-isopropylmalate synthase low > 56
Bacteroides ovatus ATCC 8483 0.45 BACOVA_01769 putative sulfate adenylyltransferase subunit 1 0.43 BACOVA_04604 2-isopropylmalate synthase low > 94
Phocaeicola vulgatus CL09T03C04 0.45 HMPREF1058_RS02940 sulfate adenylyltransferase subunit CysN 0.45 HMPREF1058_RS14545 2-isopropylmalate synthase low > 67
Bacteroides thetaiotaomicron VPI-5482 0.45 BT0415 sulfate adenylyltransferase subunit 1/adenylylsulfate kinase (NCBI ptt file) 0.43 BT1861 2-isopropylmalate synthase (EC 2.3.3.13) (from data) low > 81
Phocaeicola dorei CL03T12C01 0.44 ABI39_RS02255 sulfate adenylyltransferase subunit CysN 0.44 ABI39_RS10195 2-isopropylmalate synthase low > 72
Dechlorosoma suillum PS 0.44 Dsui_1982 sulfate adenylyltransferase, large subunit 0.45 Dsui_3519 2-isopropylmalate synthase, bacterial type — —
Agrobacterium fabrum C58 0.40 Atu0816 sulfate adenylate transferase, subunit 1 0.10 Atu2264 2-isopropylmalate synthase 0.57 12
Rhizobium sp. OAE497 0.40 ABIE40_RS04465 sulfate adenylyltransferase subunit CysN 0.16 ABIE40_RS06220 citramalate synthase 0.68 101
Paraburkholderia sabiae LMG 24235 0.38 QEN71_RS25235 sulfate adenylyltransferase subunit 1 0.42 QEN71_RS24195 2-isopropylmalate synthase low > 153
Paraburkholderia bryophila 376MFSha3.1 0.38 H281DRAFT_00118 sulfate adenylyltransferase subunit 1 0.43 H281DRAFT_04556 2-isopropylmalate synthase low > 103
Ralstonia solanacearum PSI07 0.38 RPSI07_RS12795 sulfate adenylyltransferase subunit 1 0.41 RPSI07_RS14285 2-isopropylmalate synthase low > 81
Ralstonia solanacearum UW163 0.38 UW163_RS09090 sulfate adenylyltransferase subunit 1 0.41 UW163_RS10700 2-isopropylmalate synthase — —
Ralstonia solanacearum IBSBF1503 0.38 RALBFv3_RS04580 sulfate adenylyltransferase subunit 1 0.41 RALBFv3_RS03025 2-isopropylmalate synthase — —
Cupriavidus basilensis FW507-4G11 0.38 RR42_RS16250 sulfate adenylyltransferase 0.41 RR42_RS05465 2-isopropylmalate synthase 0.37 122
Ralstonia sp. UNC404CL21Col 0.38 ABZR87_RS00190 sulfate adenylyltransferase subunit 1 0.41 ABZR87_RS14930 2-isopropylmalate synthase low > 80
Ralstonia solanacearum GMI1000 0.38 RS_RS12150 sulfate adenylyltransferase subunit 1 0.41 RS_RS10395 2-isopropylmalate synthase low > 80
Burkholderia phytofirmans PsJN 0.38 BPHYT_RS04745 sulfate adenylyltransferase 0.43 BPHYT_RS06570 2-isopropylmalate synthase low > 109
Castellaniella sp019104865 MT123 0.35 ABCV34_RS14120 GTP-binding protein 0.11 ABCV34_RS12420 2-isopropylmalate synthase 0.84 39
Hydrogenophaga sp. GW460-11-11-14-LB1 0.30 GFF4289 Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4) 0.41 GFF4281 2-isopropylmalate synthase (EC 2.3.3.13) low > 90
Variovorax sp. OAS795 0.28 ABID97_RS15360 GTP-binding protein 0.41 ABID97_RS14910 2-isopropylmalate synthase low > 91
Variovorax sp. SCN45 0.28 GFF1202 Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4) 0.41 GFF1165 2-isopropylmalate synthase (EC 2.3.3.13) low > 127
Acidovorax sp. GW101-3H11 0.28 Ac3H11_573 Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4) 0.41 Ac3H11_530 2-isopropylmalate synthase (EC 2.3.3.13) low > 79
Methanococcus maripaludis JJ 0.21 MMJJ_RS07290 translation elongation factor EF-1 subunit alpha 0.30 MMJJ_RS08870 2-isopropylmalate synthase — —
Methanococcus maripaludis S2 0.20 MMP_RS07065 translation elongation factor EF-1 subunit alpha 0.30 MMP_RS05500 2-isopropylmalate synthase — —

Not shown: 7 genomes with orthologs for HGI48_RS16990 only; 35 genomes with orthologs for HGI48_RS18055 only