Conservation of cofitness between HER17_RS01965 and HER17_RS21450 in Pectobacterium carotovorum WPP14

61 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS01965 peptidylprolyl isomerase 1.0 HER17_RS21450 oxygen-independent coproporphyrinogen III oxidase 0.79 15
Dickeya dianthicola ME23 0.72 DZA65_RS20605 peptidylprolyl isomerase 0.84 DZA65_RS22220 oxygen-independent coproporphyrinogen III oxidase low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.71 GFF3723 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) 0.82 GFF2219 Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22) low > 78
Dickeya dianthicola 67-19 0.71 HGI48_RS19515 peptidylprolyl isomerase 0.84 HGI48_RS21245 oxygen-independent coproporphyrinogen III oxidase low > 71
Dickeya dadantii 3937 0.71 DDA3937_RS19395 peptidylprolyl isomerase 0.84 DDA3937_RS00120 oxygen-independent coproporphyrinogen III oxidase 0.52 55
Escherichia coli ECOR38 0.71 HEPCGN_16115 slyD peptidylprolyl isomerase 0.83 HEPCGN_12755 hemN oxygen-independent coproporphyrinogen III oxidase low > 87
Escherichia coli ECRC102 0.71 NIAGMN_15055 slyD peptidylprolyl isomerase 0.83 NIAGMN_11875 hemN oxygen-independent coproporphyrinogen III oxidase
Escherichia coli BL21 0.71 ECD_03200 FKBP-type peptidyl prolyl cis-trans isomerase (rotamase) 0.83 ECD_03752 coproporphyrinogen III oxidase, SAM and NAD(P)H dependent, oxygen-independent low > 61
Escherichia fergusonii Becca 0.71 EFB2_00474 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD 0.83 EFB2_04750 Oxygen-independent coproporphyrinogen III oxidase low > 86
Pantoea sp. MT58 0.71 IAI47_02040 peptidylprolyl isomerase 0.76 IAI47_00445 oxygen-independent coproporphyrinogen III oxidase 0.57 7
Escherichia coli ECOR27 0.71 NOLOHH_09085 slyD peptidylprolyl isomerase 0.83 NOLOHH_06250 hemN oxygen-independent coproporphyrinogen III oxidase low > 75
Escherichia coli ECRC98 0.71 JDDGAC_20915 slyD peptidylprolyl isomerase 0.83 JDDGAC_17745 hemN oxygen-independent coproporphyrinogen III oxidase low > 86
Escherichia coli BW25113 0.71 b3349 slyD FKBP-type peptidyl prolyl cis-trans isomerase (rotamase) (NCBI) 0.83 b3867 hemN O2-independent coproporphyrinogen III oxidase (VIMSS) low > 76
Escherichia coli Nissle 1917 0.71 ECOLIN_RS19180 peptidylprolyl isomerase 0.83 ECOLIN_RS22285 oxygen-independent coproporphyrinogen III oxidase low > 55
Escherichia coli ECRC101 0.71 MCAODC_07815 slyD peptidylprolyl isomerase 0.83 MCAODC_04620 hemN oxygen-independent coproporphyrinogen III oxidase low > 87
Escherichia coli ECRC100 0.71 OKFHMN_17285 slyD peptidylprolyl isomerase 0.83 OKFHMN_14120 hemN oxygen-independent coproporphyrinogen III oxidase low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.71 OHPLBJKB_00354 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD 0.83 OHPLBJKB_04186 Oxygen-independent coproporphyrinogen III oxidase low > 73
Escherichia coli ECRC62 0.71 BNILDI_02435 slyD peptidylprolyl isomerase 0.83 BNILDI_05280 hemN oxygen-independent coproporphyrinogen III oxidase low > 75
Escherichia coli ECRC99 0.71 KEDOAH_10855 slyD peptidylprolyl isomerase 0.83 KEDOAH_14030 hemN oxygen-independent coproporphyrinogen III oxidase
Enterobacter asburiae PDN3 0.70 EX28DRAFT_4181 FKBP-type peptidyl-prolyl cis-trans isomerases 2 0.83 EX28DRAFT_4348 oxygen-independent coproporphyrinogen III oxidase low > 76
Enterobacter sp. TBS_079 0.70 MPMX20_04242 hypothetical protein 0.84 MPMX20_04598 Oxygen-independent coproporphyrinogen III oxidase low > 85
Klebsiella michiganensis M5al 0.68 BWI76_RS25920 peptidylprolyl isomerase 0.82 BWI76_RS00380 oxygen-independent coproporphyrinogen III oxidase low > 92
Erwinia tracheiphila SCR3 0.65 LU632_RS22725 slyD peptidylprolyl isomerase 0.71 LU632_RS22115 hemN oxygen-independent coproporphyrinogen III oxidase low > 74
Alteromonas macleodii MIT1002 0.36 MIT1002_02725 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD 0.43 MIT1002_02323 Oxygen-independent coproporphyrinogen-III oxidase low > 70
Shewanella amazonensis SB2B 0.36 Sama_0904 peptidyl-prolyl cis-trans isomerase SlyD (RefSeq) 0.63 Sama_0086 coproporphyrinogen III oxidase (RefSeq) low > 62
Kangiella aquimarina DSM 16071 0.36 B158DRAFT_0074 FKBP-type peptidyl-prolyl cis-trans isomerases 2 0.50 B158DRAFT_1981 coproporphyrinogen III oxidase, anaerobic (EC 1.3.99.22) low > 40
Shewanella loihica PV-4 0.35 Shew_1078 peptidylprolyl isomerase, FKBP-type (RefSeq) 0.63 Shew_3720 coproporphyrinogen III oxidase (RefSeq) low > 60
Dyella japonica UNC79MFTsu3.2 0.34 ABZR86_RS00495 peptidylprolyl isomerase 0.43 ABZR86_RS04455 oxygen-independent coproporphyrinogen III oxidase low > 74
Pseudomonas stutzeri RCH2 0.34 Psest_3212 FKBP-type peptidyl-prolyl cis-trans isomerases 2 0.47 Psest_2234 oxygen-independent coproporphyrinogen III oxidase low > 67
Pseudomonas syringae pv. syringae B728a ΔmexB 0.34 Psyr_1009 Peptidylprolyl isomerase, FKBP-type 0.47 Psyr_3423 coproporphyrinogen III oxidase, anaerobic
Pseudomonas syringae pv. syringae B728a 0.34 Psyr_1009 Peptidylprolyl isomerase, FKBP-type 0.47 Psyr_3423 coproporphyrinogen III oxidase, anaerobic low > 86
Pseudomonas sp. RS175 0.33 PFR28_00197 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD 0.47 PFR28_01080 Oxygen-independent coproporphyrinogen III oxidase low > 88
Pseudomonas fluorescens FW300-N2E2 0.33 Pf6N2E2_5262 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) 0.47 Pf6N2E2_1410 Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22) low > 103
Pseudomonas fluorescens SBW25-INTG 0.33 PFLU_RS03790 peptidylprolyl isomerase 0.47 PFLU_RS22385 oxygen-independent coproporphyrinogen III oxidase low > 109
Pseudomonas fluorescens FW300-N2C3 0.33 AO356_16690 peptidylprolyl isomerase 0.46 AO356_02480 coproporphyrinogen III oxidase low > 104
Pseudomonas putida KT2440 0.33 PP_0776 FKBP-type peptidyl-prolyl cis-trans isomerase 0.47 PP_4264 oxygen-independent coproporphyrinogen III dehydrogenase
Pseudomonas simiae WCS417 0.33 PS417_03740 peptidylprolyl isomerase 0.47 PS417_20775 coproporphyrinogen III oxidase low > 88
Pseudomonas fluorescens SBW25 0.33 PFLU_RS03790 peptidylprolyl isomerase 0.47 PFLU_RS22385 oxygen-independent coproporphyrinogen III oxidase low > 109
Rhodanobacter sp. FW510-T8 0.33 OKGIIK_03570 Peptidyl-prolyl cis-trans isomerase 0.44 OKGIIK_00800 hemN oxygen-independent coproporphyrinogen III oxidase low > 52
Pseudomonas fluorescens GW456-L13 0.32 PfGW456L13_4988 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) 0.47 PfGW456L13_4070 Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22) low > 87
Pseudomonas fluorescens FW300-N2E3 0.32 AO353_05055 peptidylprolyl isomerase 0.47 AO353_00655 coproporphyrinogen III oxidase low > 101
Rhodanobacter denitrificans FW104-10B01 0.32 LRK54_RS14745 peptidylprolyl isomerase 0.44 LRK54_RS05835 oxygen-independent coproporphyrinogen III oxidase low > 59
Rhodanobacter denitrificans MT42 0.32 LRK55_RS14460 peptidylprolyl isomerase 0.44 LRK55_RS05590 oxygen-independent coproporphyrinogen III oxidase low > 63
Pseudomonas fluorescens FW300-N1B4 0.32 Pf1N1B4_1052 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) 0.48 Pf1N1B4_5783 Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22) 0.22 79
Ralstonia solanacearum GMI1000 0.30 RS_RS05725 peptidylprolyl isomerase 0.45 RS_RS16455 oxygen-independent coproporphyrinogen III oxidase low > 80
Ralstonia solanacearum PSI07 0.30 RPSI07_RS18450 peptidylprolyl isomerase 0.46 RPSI07_RS08635 oxygen-independent coproporphyrinogen III oxidase low > 81
Ralstonia solanacearum UW163 0.29 UW163_RS12380 peptidylprolyl isomerase 0.45 UW163_RS05010 oxygen-independent coproporphyrinogen III oxidase
Ralstonia solanacearum IBSBF1503 0.29 RALBFv3_RS14910 peptidylprolyl isomerase 0.45 RALBFv3_RS08600 oxygen-independent coproporphyrinogen III oxidase low > 76
Lysobacter sp. OAE881 0.29 ABIE51_RS06395 peptidylprolyl isomerase 0.45 ABIE51_RS03875 oxygen-independent coproporphyrinogen III oxidase low > 62
Dechlorosoma suillum PS 0.28 Dsui_2872 FKBP-type peptidyl-prolyl cis-trans isomerase 0.47 Dsui_1647 oxygen-independent coproporphyrinogen III oxidase low > 51
Pseudomonas sp. S08-1 0.28 OH686_06255 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD 0.47 OH686_02235 oxygen-independent coproporphyrinogen III oxidase low > 80
Magnetospirillum magneticum AMB-1 0.27 AMB_RS19590 peptidylprolyl isomerase 0.33 AMB_RS13570 oxygen-independent coproporphyrinogen III oxidase
Mucilaginibacter yixingensis YX-36 DSM 26809 0.25 ABZR88_RS07860 peptidylprolyl isomerase 0.29 ABZR88_RS05615 oxygen-independent coproporphyrinogen III oxidase low > 71
Herbaspirillum seropedicae SmR1 0.24 HSERO_RS16370 peptidyl-prolyl cis-trans isomerase 0.47 HSERO_RS16075 coproporphyrinogen III oxidase low > 78
Hydrogenophaga sp. GW460-11-11-14-LB1 0.24 GFF3652 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) 0.46 GFF4143 Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22) low > 90
Parabacteroides merdae CL09T00C40 0.23 HMPREF1078_RS16705 FKBP-type peptidyl-prolyl cis-trans isomerase 0.31 HMPREF1078_RS13395 oxygen-independent coproporphyrinogen III oxidase low > 61
Pedobacter sp. GW460-11-11-14-LB5 0.23 CA265_RS12900 peptidylprolyl isomerase 0.29 CA265_RS01360 oxygen-independent coproporphyrinogen III oxidase low > 88
Echinicola vietnamensis KMM 6221, DSM 17526 0.22 Echvi_1133 FKBP-type peptidyl-prolyl cis-trans isomerases 2 0.31 Echvi_4019 oxygen-independent coproporphyrinogen III oxidase low > 79
Variovorax sp. SCN45 0.22 GFF7163 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) 0.43 GFF6957 Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22) low > 127
Variovorax sp. OAS795 0.22 ABID97_RS02385 peptidylprolyl isomerase 0.47 ABID97_RS16190 oxygen-independent coproporphyrinogen III oxidase low > 91
Acidovorax sp. GW101-3H11 0.21 Ac3H11_1303 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) 0.46 Ac3H11_976 Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22) low > 79
Pontibacter actiniarum KMM 6156, DSM 19842 0.20 CA264_05445 peptidylprolyl isomerase 0.32 CA264_03125 oxygen-independent coproporphyrinogen III oxidase low > 74

Not shown: 1 genomes with orthologs for HER17_RS01965 only; 26 genomes with orthologs for HER17_RS21450 only