Conservation of cofitness between HER17_RS01910 and HER17_RS20625 in Pectobacterium carotovorum WPP14

54 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS01910 aspartate aminotransferase family protein 1.0 HER17_RS20625 acetylglutamate kinase 0.96 3
Dickeya dadantii 3937 0.86 DDA3937_RS19450 aspartate aminotransferase family protein 0.92 DDA3937_RS20345 acetylglutamate kinase 0.87 5
Dickeya dianthicola ME23 0.86 DZA65_RS20655 aspartate aminotransferase family protein 0.91 DZA65_RS00940 acetylglutamate kinase 0.92 3
Dickeya dianthicola 67-19 0.86 HGI48_RS19570 aspartate aminotransferase family protein 0.91 HGI48_RS00880 acetylglutamate kinase low > 71
Serratia liquefaciens MT49 0.82 IAI46_23590 aspartate aminotransferase family protein 0.85 IAI46_24510 acetylglutamate kinase 0.69 54
Klebsiella michiganensis M5al 0.80 BWI76_RS26000 aspartate aminotransferase family protein 0.83 BWI76_RS00850 acetylglutamate kinase 0.71 19
Rahnella sp. WP5 0.79 EX31_RS04630 aspartate aminotransferase family protein 0.85 EX31_RS14185 acetylglutamate kinase 0.87 36
Pantoea sp. MT58 0.79 IAI47_01955 aspartate aminotransferase family protein 0.83 IAI47_00910 acetylglutamate kinase 0.81 6
Escherichia coli BL21 0.79 ECD_03210 bifunctional acetylornithine aminotransferase and succinyldiaminopimelate aminotransferase 0.81 ECD_03844 acetylglutamate kinase 0.63 2
Escherichia coli ECOR27 0.79 NOLOHH_09030 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.82 NOLOHH_05725 acetylglutamate kinase low > 75
Escherichia coli BW25113 0.79 b3359 argD bifunctional acetylornithine aminotransferase/ succinyldiaminopimelate aminotransferase (NCBI) 0.82 b3959 argB acetylglutamate kinase (RefSeq) 0.49 8
Enterobacter sp. TBS_079 0.79 MPMX20_04262 Acetylornithine/succinyldiaminopimelate aminotransferase 0.82 MPMX20_04521 Acetylglutamate kinase 0.62 8
Escherichia fergusonii Becca 0.79 EFB2_00463 Acetylornithine/succinyldiaminopimelate aminotransferase 0.81 EFB2_04655 Acetylglutamate kinase low > 86
Escherichia coli ECRC62 0.78 BNILDI_02490 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.82 BNILDI_05800 acetylglutamate kinase low > 75
Escherichia coli Nissle 1917 0.78 ECOLIN_RS19240 bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.81 ECOLIN_RS22850 acetylglutamate kinase low > 55
Escherichia coli ECOR38 0.78 HEPCGN_16055 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.81 HEPCGN_12225 acetylglutamate kinase 0.70 28
Escherichia coli ECRC98 0.78 JDDGAC_20860 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.81 JDDGAC_17205 acetylglutamate kinase low > 86
Escherichia coli ECRC100 0.78 OKFHMN_17230 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.81 OKFHMN_13580 acetylglutamate kinase 0.86 36
Escherichia coli ECRC102 0.78 NIAGMN_15000 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.81 NIAGMN_11330 acetylglutamate kinase
Escherichia coli ECRC99 0.78 KEDOAH_10910 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.82 KEDOAH_14580 acetylglutamate kinase
Escherichia coli ECRC101 0.78 MCAODC_07760 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.81 MCAODC_04080 acetylglutamate kinase low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.78 GFF3710 Acetylornithine aminotransferase (EC 2.6.1.11) / N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) 0.80 GFF2345 Acetylglutamate kinase (EC 2.7.2.8) low > 78
Escherichia coli HS(pFamp)R (ATCC 700891) 0.78 OHPLBJKB_00343 Acetylornithine/succinyldiaminopimelate aminotransferase 0.82 OHPLBJKB_04091 Acetylglutamate kinase low > 73
Enterobacter asburiae PDN3 0.78 EX28DRAFT_4170 transaminase, acetylornithine/succinylornithine family/succinylornithine transaminase family 0.82 EX28DRAFT_4421 N-acetylglutamate kinase (EC 2.7.2.8) low > 76
Erwinia tracheiphila SCR3 0.77 LU632_RS22810 aspartate aminotransferase family protein 0.83 LU632_RS19610 argB acetylglutamate kinase 0.87 15
Pseudomonas fluorescens FW300-N2E2 0.67 Pf6N2E2_5665 Succinylornithine transaminase (EC 2.6.1.81) 0.23 Pf6N2E2_4373 Acetylglutamate kinase (EC 2.7.2.8)
Pseudomonas fluorescens FW300-N2C3 0.67 AO356_18725 acetylornithine aminotransferase 0.23 AO356_12525 acetylglutamate kinase low > 104
Pseudomonas fluorescens FW300-N1B4 0.66 Pf1N1B4_3440 Succinylornithine transaminase (EC 2.6.1.81) (from data) 0.23 Pf1N1B4_2121 Acetylglutamate kinase (EC 2.7.2.8)
Pseudomonas fluorescens FW300-N2E3 0.65 AO353_03025 acetylornithine aminotransferase 0.23 AO353_09240 acetylglutamate kinase low > 101
Shewanella loihica PV-4 0.65 Shew_0578 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein (RefSeq) 0.44 Shew_0203 acetylglutamate kinase (RefSeq) 0.73 18
Shewanella oneidensis MR-1 0.65 SO0617 argD acetylornithine aminotransferase (NCBI ptt file) 0.43 SO0276 argB acetylglutamate kinase (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.65 Sama_3011 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein (RefSeq) 0.40 Sama_0257 acetylglutamate kinase (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.65 MIT1002_00437 Succinylornithine transaminase/acetylornithine aminotransferase 0.35 MIT1002_00470 Acetylglutamate kinase 0.97 30
Shewanella sp. ANA-3 0.65 Shewana3_0610 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein (RefSeq) 0.42 Shewana3_3904 acetylglutamate kinase (RefSeq) low > 73
Vibrio cholerae E7946 ATCC 55056 0.64 CSW01_13250 aspartate aminotransferase family protein 0.58 CSW01_13375 acetylglutamate kinase low > 62
Acinetobacter radioresistens SK82 0.60 MPMX26_02251 Succinylornithine transaminase 0.22 MPMX26_02413 Acetylglutamate kinase low > 36
Agrobacterium fabrum C58 0.42 Atu0428 acetylornithine aminotransferase 0.21 Atu0380 acetylglutamate kinase
Rhizobium sp. OAE497 0.42 ABIE40_RS02320 aspartate aminotransferase family protein 0.21 ABIE40_RS01970 acetylglutamate kinase 0.93 23
Caulobacter crescentus NA1000 0.41 CCNA_00620 acetylornithine aminotransferase/succinyldiaminopimelate aminotransferase 0.21 CCNA_00285 acetylglutamate kinase
Caulobacter crescentus NA1000 Δfur 0.41 CCNA_00620 acetylornithine aminotransferase/succinyldiaminopimelate aminotransferase 0.21 CCNA_00285 acetylglutamate kinase
Methanococcus maripaludis JJ 0.41 MMJJ_RS08660 acetylornithine transaminase 0.20 MMJJ_RS05120 acetylglutamate kinase
Methanococcus maripaludis S2 0.41 MMP_RS05690 acetylornithine transaminase 0.19 MMP_RS00365 acetylglutamate kinase
Sinorhizobium meliloti 1021 0.39 SMc02138 acetylornithine transaminase 0.21 SMc01726 acetylglutamate kinase 0.93 3
Phaeobacter inhibens DSM 17395 0.39 PGA1_c24230 acetylornithine aminotransferase ArgD 0.27 PGA1_c02050 acetylglutamate kinase ArgB 0.96 1
Brevundimonas sp. GW460-12-10-14-LB2 0.38 A4249_RS11925 aspartate aminotransferase family protein 0.21 A4249_RS12965 acetylglutamate kinase
Synechococcus elongatus PCC 7942 0.35 Synpcc7942_0943 argD acetylornithine aminotransferase 0.23 Synpcc7942_1496 argB acetylglutamate kinase
Cupriavidus basilensis FW507-4G11 0.33 RR42_RS16955 acetylornithine aminotransferase 0.23 RR42_RS01125 acetylglutamate kinase
Parabacteroides merdae CL09T00C40 0.29 HMPREF1078_RS12615 ornithine--oxo-acid transaminase 0.16 HMPREF1078_RS15335 acetylglutamate kinase low > 61
Bacteroides stercoris CC31F 0.28 HMPREF1181_RS03445 aspartate aminotransferase family protein 0.17 HMPREF1181_RS02540 acetylglutamate kinase 0.97 11
Bacteroides thetaiotaomicron VPI-5482 0.28 BT3758 N-succinylornithine aminotransferase (EC 2.6.1.81) (from data) 0.17 BT3395 N-succinylglutamate kinase (EC 2.7.2.-) (from data) 0.90 5
Phocaeicola dorei CL03T12C01 0.27 ABI39_RS02965 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme 0.18 ABI39_RS04685 acetylglutamate kinase low > 72
Bacteroides ovatus ATCC 8483 0.27 BACOVA_03588 aminotransferase, class III 0.17 BACOVA_01910 acetylglutamate kinase 0.98 2
Phocaeicola vulgatus CL09T03C04 0.27 HMPREF1058_RS15260 ornithine--oxo-acid transaminase 0.18 HMPREF1058_RS12115 acetylglutamate kinase low > 67
Mucilaginibacter yixingensis YX-36 DSM 26809 0.26 ABZR88_RS15500 aspartate aminotransferase family protein 0.20 ABZR88_RS09860 acetylglutamate kinase
Pontibacter actiniarum KMM 6156, DSM 19842 0.25 CA264_15645 ornithine--oxo-acid transaminase 0.15 CA264_06235 acetylglutamate kinase low > 74

Not shown: 46 genomes with orthologs for HER17_RS01910 only; 2 genomes with orthologs for HER17_RS20625 only