Conservation of cofitness between HER17_RS01965 and HER17_RS20040 in Pectobacterium carotovorum WPP14

60 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS01965 peptidylprolyl isomerase 1.0 HER17_RS20040 3-deoxy-manno-octulosonate-8-phosphatase KdsC 0.79 16
Dickeya dianthicola ME23 0.72 DZA65_RS20605 peptidylprolyl isomerase 0.85 DZA65_RS01530 3-deoxy-manno-octulosonate-8-phosphatase KdsC low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.71 GFF3723 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) 0.77 GFF2942 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45) low > 78
Dickeya dianthicola 67-19 0.71 HGI48_RS19515 peptidylprolyl isomerase 0.85 HGI48_RS01465 3-deoxy-manno-octulosonate-8-phosphatase KdsC 0.48 38
Dickeya dadantii 3937 0.71 DDA3937_RS19395 peptidylprolyl isomerase 0.85 DDA3937_RS01550 3-deoxy-manno-octulosonate-8-phosphatase KdsC low > 74
Escherichia coli BW25113 0.71 b3349 slyD FKBP-type peptidyl prolyl cis-trans isomerase (rotamase) (NCBI) 0.78 b3198 kdsC 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (NCBI) low > 76
Escherichia coli ECRC99 0.71 KEDOAH_10855 slyD peptidylprolyl isomerase 0.78 KEDOAH_10190 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC
Escherichia coli ECRC102 0.71 NIAGMN_15055 slyD peptidylprolyl isomerase 0.78 NIAGMN_15720 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC
Pantoea sp. MT58 0.71 IAI47_02040 peptidylprolyl isomerase 0.80 IAI47_17165 3-deoxy-manno-octulosonate-8-phosphatase KdsC low > 76
Escherichia coli ECRC62 0.71 BNILDI_02435 slyD peptidylprolyl isomerase 0.78 BNILDI_01775 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC low > 75
Escherichia coli ECRC98 0.71 JDDGAC_20915 slyD peptidylprolyl isomerase 0.78 JDDGAC_21585 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.71 OHPLBJKB_00354 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD 0.78 OHPLBJKB_00502 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC low > 73
Escherichia coli ECRC100 0.71 OKFHMN_17285 slyD peptidylprolyl isomerase 0.78 OKFHMN_17960 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC low > 80
Escherichia coli ECRC101 0.71 MCAODC_07815 slyD peptidylprolyl isomerase 0.78 MCAODC_08480 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC low > 87
Escherichia coli BL21 0.71 ECD_03200 FKBP-type peptidyl prolyl cis-trans isomerase (rotamase) 0.78 ECD_03063 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase low > 61
Escherichia fergusonii Becca 0.71 EFB2_00474 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD 0.78 EFB2_00625 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC low > 86
Escherichia coli Nissle 1917 0.71 ECOLIN_RS19180 peptidylprolyl isomerase 0.78 ECOLIN_RS18405 3-deoxy-manno-octulosonate-8-phosphatase KdsC low > 55
Escherichia coli ECOR38 0.71 HEPCGN_16115 slyD peptidylprolyl isomerase 0.78 HEPCGN_16835 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC low > 87
Escherichia coli ECOR27 0.71 NOLOHH_09085 slyD peptidylprolyl isomerase 0.78 NOLOHH_09760 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC low > 75
Enterobacter asburiae PDN3 0.70 EX28DRAFT_4181 FKBP-type peptidyl-prolyl cis-trans isomerases 2 0.77 EX28DRAFT_3252 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family low > 76
Enterobacter sp. TBS_079 0.70 MPMX20_04242 hypothetical protein 0.77 MPMX20_04104 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC 0.43 9
Klebsiella michiganensis M5al 0.68 BWI76_RS25920 peptidylprolyl isomerase 0.79 BWI76_RS25245 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase low > 92
Erwinia tracheiphila SCR3 0.65 LU632_RS22725 slyD peptidylprolyl isomerase 0.79 LU632_RS21260 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC low > 74
Alteromonas macleodii MIT1002 0.36 MIT1002_02725 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD 0.45 MIT1002_00831 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC
Shewanella amazonensis SB2B 0.36 Sama_0904 peptidyl-prolyl cis-trans isomerase SlyD (RefSeq) 0.54 Sama_3084 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (RefSeq)
Kangiella aquimarina DSM 16071 0.36 B158DRAFT_0074 FKBP-type peptidyl-prolyl cis-trans isomerases 2 0.53 B158DRAFT_2084 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family
Shewanella loihica PV-4 0.35 Shew_1078 peptidylprolyl isomerase, FKBP-type (RefSeq) 0.58 Shew_3307 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (RefSeq)
Acinetobacter radioresistens SK82 0.34 MPMX26_01005 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD 0.35 MPMX26_01968 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC
Dyella japonica UNC79MFTsu3.2 0.34 ABZR86_RS00495 peptidylprolyl isomerase 0.41 ABZR86_RS19835 HAD family hydrolase
Pseudomonas stutzeri RCH2 0.34 Psest_3212 FKBP-type peptidyl-prolyl cis-trans isomerases 2 0.41 Psest_3309 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family
Pseudomonas syringae pv. syringae B728a 0.34 Psyr_1009 Peptidylprolyl isomerase, FKBP-type 0.41 Psyr_4143 HAD-superfamily hydrolase, subfamily IIIA:Phosphatase YrbI low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.34 Psyr_1009 Peptidylprolyl isomerase, FKBP-type 0.41 Psyr_4143 HAD-superfamily hydrolase, subfamily IIIA:Phosphatase YrbI
Pseudomonas fluorescens FW300-N2E2 0.33 Pf6N2E2_5262 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) 0.40 Pf6N2E2_3263 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45)
Pseudomonas sp. RS175 0.33 PFR28_00197 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD 0.41 PFR28_00177 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC
Pseudomonas putida KT2440 0.33 PP_0776 FKBP-type peptidyl-prolyl cis-trans isomerase 0.40 PP_0956 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
Pseudomonas fluorescens FW300-N2C3 0.33 AO356_16690 peptidylprolyl isomerase 0.41 AO356_07015 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
Pseudomonas fluorescens SBW25-INTG 0.33 PFLU_RS03790 peptidylprolyl isomerase 0.41 PFLU_RS04420 HAD family hydrolase
Pseudomonas simiae WCS417 0.33 PS417_03740 peptidylprolyl isomerase 0.41 PS417_04365 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase low > 88
Pseudomonas fluorescens SBW25 0.33 PFLU_RS03790 peptidylprolyl isomerase 0.41 PFLU_RS04420 HAD family hydrolase
Rhodanobacter sp. FW510-T8 0.33 OKGIIK_03570 Peptidyl-prolyl cis-trans isomerase 0.35 OKGIIK_02285 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC
Pseudomonas fluorescens GW456-L13 0.32 PfGW456L13_4988 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) 0.41 PfGW456L13_5010 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45)
Pseudomonas fluorescens FW300-N2E3 0.32 AO353_05055 peptidylprolyl isomerase 0.41 AO353_05160 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
Rhodanobacter denitrificans FW104-10B01 0.32 LRK54_RS14745 peptidylprolyl isomerase 0.38 LRK54_RS12895 HAD hydrolase family protein
Rhodanobacter denitrificans MT42 0.32 LRK55_RS14460 peptidylprolyl isomerase 0.38 LRK55_RS12595 HAD hydrolase family protein
Pseudomonas fluorescens FW300-N1B4 0.32 Pf1N1B4_1052 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) 0.41 Pf1N1B4_1076 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45)
Ralstonia solanacearum GMI1000 0.30 RS_RS05725 peptidylprolyl isomerase 0.39 RS_RS02040 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase low > 80
Ralstonia solanacearum PSI07 0.30 RPSI07_RS18450 peptidylprolyl isomerase 0.37 RPSI07_RS22110 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase low > 81
Ralstonia solanacearum UW163 0.29 UW163_RS12380 peptidylprolyl isomerase 0.35 UW163_RS02390 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
Ralstonia solanacearum IBSBF1503 0.29 RALBFv3_RS14910 peptidylprolyl isomerase 0.35 RALBFv3_RS11190 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase low > 76
Lysobacter sp. OAE881 0.29 ABIE51_RS06395 peptidylprolyl isomerase 0.33 ABIE51_RS15935 HAD hydrolase family protein
Dechlorosoma suillum PS 0.28 Dsui_2872 FKBP-type peptidyl-prolyl cis-trans isomerase 0.34 Dsui_1381 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family low > 51
Pseudomonas sp. S08-1 0.28 OH686_06255 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD 0.37 OH686_08520 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
Herbaspirillum seropedicae SmR1 0.24 HSERO_RS16370 peptidyl-prolyl cis-trans isomerase 0.38 HSERO_RS19835 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase low > 78
Hydrogenophaga sp. GW460-11-11-14-LB1 0.24 GFF3652 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) 0.26 GFF2443 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45) low > 90
Parabacteroides merdae CL09T00C40 0.23 HMPREF1078_RS16705 FKBP-type peptidyl-prolyl cis-trans isomerase 0.27 HMPREF1078_RS00030 HAD-IIIA family hydrolase low > 61
Pedobacter sp. GW460-11-11-14-LB5 0.23 CA265_RS12900 peptidylprolyl isomerase 0.27 CA265_RS03520 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase low > 88
Echinicola vietnamensis KMM 6221, DSM 17526 0.22 Echvi_1133 FKBP-type peptidyl-prolyl cis-trans isomerases 2 0.33 Echvi_2130 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family low > 79
Variovorax sp. SCN45 0.22 GFF7163 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) 0.34 GFF3270 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45) low > 127
Variovorax sp. OAS795 0.22 ABID97_RS02385 peptidylprolyl isomerase 0.36 ABID97_RS02625 HAD hydrolase family protein low > 91
Acidovorax sp. GW101-3H11 0.21 Ac3H11_1303 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) 0.32 Ac3H11_4271 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45) low > 79
Pontibacter actiniarum KMM 6156, DSM 19842 0.20 CA264_05445 peptidylprolyl isomerase 0.30 CA264_18675 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase low > 74

Not shown: 2 genomes with orthologs for HER17_RS01965 only; 21 genomes with orthologs for HER17_RS20040 only