Conservation of cofitness between HER17_RS20780 and HER17_RS16415 in Pectobacterium carotovorum WPP14

53 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS20780 lipopolysaccharide heptosyltransferase RfaC 1.0 HER17_RS16415 transcriptional regulator GcvA 0.85 19
Dickeya dianthicola ME23 0.78 DZA65_RS00815 lipopolysaccharide heptosyltransferase RfaC 0.94 DZA65_RS05390 transcriptional regulator GcvA — —
Dickeya dadantii 3937 0.77 DDA3937_RS20450 lipopolysaccharide heptosyltransferase RfaC 0.95 DDA3937_RS05050 transcriptional regulator GcvA — —
Dickeya dianthicola 67-19 0.77 HGI48_RS00760 lipopolysaccharide heptosyltransferase RfaC 0.94 HGI48_RS05050 transcriptional regulator GcvA — —
Rahnella sp. WP5 0.77 EX31_RS14405 lipopolysaccharide heptosyltransferase RfaC 0.88 EX31_RS13110 transcriptional regulator GcvA low > 89
Serratia liquefaciens MT49 0.77 IAI46_24745 lipopolysaccharide heptosyltransferase RfaC 0.90 IAI46_20340 transcriptional regulator GcvA — —
Pantoea sp. MT58 0.73 IAI47_00680 lipopolysaccharide heptosyltransferase RfaC 0.90 IAI47_04025 transcriptional regulator GcvA — —
Escherichia coli ECOR27 0.73 NOLOHH_07570 rfaC lipopolysaccharide heptosyltransferase RfaC 0.91 NOLOHH_12000 gcvA glycine cleavage system transcriptional regulator GcvA — —
Escherichia coli BW25113 0.72 b3621 rfaC ADP-heptose:LPS heptosyl transferase I (NCBI) 0.91 b2808 gcvA DNA-binding transcriptional dual regulator (NCBI) low > 76
Escherichia coli ECRC101 0.72 MCAODC_06200 rfaC lipopolysaccharide heptosyltransferase RfaC 0.91 MCAODC_10645 gcvA glycine cleavage system transcriptional regulator GcvA — —
Escherichia coli ECRC99 0.72 KEDOAH_12460 rfaC lipopolysaccharide heptosyltransferase RfaC 0.91 KEDOAH_08010 gcvA glycine cleavage system transcriptional regulator GcvA — —
Escherichia coli ECRC98 0.72 JDDGAC_19315 rfaC lipopolysaccharide heptosyltransferase RfaC 0.91 JDDGAC_23785 gcvA glycine cleavage system transcriptional regulator GcvA — —
Escherichia coli ECRC100 0.72 OKFHMN_15690 rfaC lipopolysaccharide heptosyltransferase RfaC 0.91 OKFHMN_20120 gcvA glycine cleavage system transcriptional regulator GcvA — —
Escherichia coli ECRC102 0.72 NIAGMN_13450 rfaC lipopolysaccharide heptosyltransferase RfaC 0.91 NIAGMN_17890 gcvA glycine cleavage system transcriptional regulator GcvA — —
Enterobacter sp. TBS_079 0.72 MPMX20_00112 Lipopolysaccharide heptosyltransferase 1 0.90 MPMX20_03671 Glycine cleavage system transcriptional activator — —
Escherichia fergusonii Becca 0.72 EFB2_00190 Lipopolysaccharide heptosyltransferase 1 0.91 EFB2_01109 Glycine cleavage system transcriptional activator — —
Escherichia coli Nissle 1917 0.72 ECOLIN_RS20655 lipopolysaccharide heptosyltransferase RfaC 0.91 ECOLIN_RS15650 glycine cleavage system transcriptional regulator GcvA low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.71 OHPLBJKB_00079 Lipopolysaccharide heptosyltransferase 1 0.91 OHPLBJKB_00923 Glycine cleavage system transcriptional activator — —
Escherichia coli BL21 0.71 ECD_03478 ADP-heptose:LPS heptosyl transferase I 0.91 ECD_02659 glycine cleavage system transcriptional activator; autorepressor — —
Escherichia coli ECOR38 0.71 HEPCGN_14535 rfaC lipopolysaccharide heptosyltransferase RfaC 0.91 HEPCGN_19375 gcvA glycine cleavage system transcriptional regulator GcvA — —
Enterobacter asburiae PDN3 0.71 EX28DRAFT_3873 lipopolysaccharide heptosyltransferase I 0.90 EX28DRAFT_2883 Transcriptional regulator — —
Escherichia coli ECRC62 0.71 BNILDI_03940 rfaC lipopolysaccharide heptosyltransferase RfaC 0.91 BNILDI_10505 gcvA glycine cleavage system transcriptional regulator GcvA — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.70 GFF390 Lipopolysaccharide heptosyltransferase I (EC 2.4.1.-) 0.91 GFF4865 Glycine cleavage system transcriptional activator GcvA low > 78
Erwinia tracheiphila SCR3 0.70 LU632_RS21925 rfaC lipopolysaccharide heptosyltransferase RfaC 0.91 LU632_RS06255 transcriptional regulator GcvA — —
Klebsiella michiganensis M5al 0.68 BWI76_RS27270 ADP-heptose--LPS heptosyl transferase I 0.90 BWI76_RS22955 transcriptional regulator GcvA — —
Pseudomonas fluorescens FW300-N1B4 0.51 Pf1N1B4_1472 Lipopolysaccharide heptosyltransferase I (EC 2.4.1.-) 0.29 Pf1N1B4_72 Transcriptional regulator, LysR family low > 87
Pseudomonas fluorescens GW456-L13 0.51 PfGW456L13_211 Lipopolysaccharide heptosyltransferase I (EC 2.4.1.-) 0.29 PfGW456L13_4953 Glycine cleavage system transcriptional activator — —
Pseudomonas fluorescens FW300-N2E3 0.51 AO353_12880 ADP-heptose--LPS heptosyltransferase 0.28 AO353_15505 LysR family transcriptional regulator low > 101
Pseudomonas simiae WCS417 0.50 PS417_02235 ADP-heptose--LPS heptosyltransferase 0.29 PS417_14890 LysR family transcriptional regulator — —
Pseudomonas syringae pv. syringae B728a 0.50 Psyr_0521 Glycosyl transferase, family 9 0.29 Psyr_3521 transcriptional regulator, LysR family — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.50 Psyr_0521 Glycosyl transferase, family 9 0.29 Psyr_3521 transcriptional regulator, LysR family — —
Pseudomonas fluorescens SBW25 0.50 PFLU_RS02290 lipopolysaccharide heptosyltransferase I 0.29 PFLU_RS16235 transcriptional regulator GcvA — —
Pseudomonas fluorescens SBW25-INTG 0.50 PFLU_RS02290 lipopolysaccharide heptosyltransferase I 0.29 PFLU_RS16235 transcriptional regulator GcvA — —
Pseudomonas sp. RS175 0.49 PFR28_05064 Lipopolysaccharide heptosyltransferase 1 0.28 PFR28_04727 Glycine cleavage system transcriptional activator — —
Pseudomonas stutzeri RCH2 0.49 Psest_0452 lipopolysaccharide heptosyltransferase I 0.28 Psest_2739 Transcriptional regulator — —
Pseudomonas sp. S08-1 0.48 OH686_09685 lipopolysaccharide heptosyltransferase I 0.29 OH686_20310 Transcriptional regulator, LysR family — —
Pseudomonas putida KT2440 0.48 PP_0342 ADP-heptose:LPS heptosyltransferase I 0.29 PP_4107 Transcriptional regulator, LysR family — —
Pseudomonas fluorescens FW300-N2C3 0.48 AO356_08945 ADP-heptose--LPS heptosyltransferase 0.29 AO356_15125 LysR family transcriptional regulator — —
Pseudomonas fluorescens FW300-N2E2 0.48 Pf6N2E2_3670 Lipopolysaccharide heptosyltransferase I (EC 2.4.1.-) 0.37 Pf6N2E2_1560 Glycine cleavage system transcriptional activator GcvA — —
Rhodopseudomonas palustris CGA009 0.37 TX73_020670 lipopolysaccharide heptosyltransferase I 0.21 TX73_013680 LysR substrate-binding domain-containing protein — —
Castellaniella sp019104865 MT123 0.36 ABCV34_RS13305 lipopolysaccharide heptosyltransferase I 0.26 ABCV34_RS01790 LysR substrate-binding domain-containing protein — —
Dechlorosoma suillum PS 0.32 Dsui_0403 lipopolysaccharide heptosyltransferase I 0.25 Dsui_2033 transcriptional regulator — —
Burkholderia phytofirmans PsJN 0.31 BPHYT_RS04475 glycosyl transferase family 1 0.33 BPHYT_RS11810 LysR family transcriptional regulator — —
Paraburkholderia graminis OAS925 0.30 ABIE53_001190 heptosyltransferase-1 0.38 ABIE53_001336 LysR family glycine cleavage system transcriptional activator — —
Paraburkholderia bryophila 376MFSha3.1 0.30 H281DRAFT_00079 heptosyltransferase-1 0.33 H281DRAFT_02051 LysR family transcriptional regulator, glycine cleavage system transcriptional activator — —
Ralstonia solanacearum PSI07 0.29 RPSI07_RS20560 lipopolysaccharide heptosyltransferase I 0.33 RPSI07_RS11375 transcriptional regulator GcvA — —
Herbaspirillum seropedicae SmR1 0.29 HSERO_RS02360 ADP-heptose--LPS heptosyltransferase 0.30 HSERO_RS16765 LysR family transcriptional regulator — —
Ralstonia solanacearum GMI1000 0.29 RS_RS03480 lipopolysaccharide heptosyltransferase I 0.34 RS_RS13815 transcriptional regulator GcvA — —
Ralstonia solanacearum UW163 0.29 UW163_RS00865 lipopolysaccharide heptosyltransferase I 0.33 UW163_RS22635 transcriptional regulator GcvA — —
Ralstonia sp. UNC404CL21Col 0.29 ABZR87_RS08750 lipopolysaccharide heptosyltransferase I 0.33 ABZR87_RS01495 transcriptional regulator GcvA low > 80
Ralstonia solanacearum IBSBF1503 0.29 RALBFv3_RS12700 lipopolysaccharide heptosyltransferase I 0.33 RALBFv3_RS22095 transcriptional regulator GcvA low > 76
Cupriavidus basilensis FW507-4G11 0.28 RR42_RS15685 ADP-heptose--LPS heptosyltransferase 0.31 RR42_RS26815 LysR family transcriptional regulator — —
Paraburkholderia sabiae LMG 24235 0.28 QEN71_RS25410 lipopolysaccharide heptosyltransferase I 0.32 QEN71_RS01310 transcriptional regulator GcvA — —
Marinobacter adhaerens HP15 0.11 HP15_438 lipopolysaccharide biosynthesis protein 0.27 HP15_1669 transcriptional regulator, LysR family protein — —

Not shown: 2 genomes with orthologs for HER17_RS20780 only; 33 genomes with orthologs for HER17_RS16415 only