Conservation of cofitness between HER17_RS15875 and HER17_RS15895 in Pectobacterium carotovorum WPP14

55 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS15875 cytochrome o ubiquinol oxidase subunit II 1.0 HER17_RS15895 heme o synthase 0.85 1
Dickeya dadantii 3937 0.82 DDA3937_RS05615 cytochrome o ubiquinol oxidase subunit II 0.94 DDA3937_RS05595 protoheme IX farnesyltransferase low > 74
Dickeya dianthicola 67-19 0.82 HGI48_RS05660 cytochrome o ubiquinol oxidase subunit II 0.93 HGI48_RS05640 protoheme IX farnesyltransferase 0.51 50
Dickeya dianthicola ME23 0.81 DZA65_RS05985 cytochrome o ubiquinol oxidase subunit II 0.93 DZA65_RS05965 protoheme IX farnesyltransferase 0.47 8
Escherichia coli HS(pFamp)R (ATCC 700891) 0.68 OHPLBJKB_03241 Cytochrome bo(3) ubiquinol oxidase subunit 2 0.85 OHPLBJKB_03245 Protoheme IX farnesyltransferase 0.83 6
Escherichia coli ECRC62 0.68 BNILDI_22710 cyoA cytochrome o ubiquinol oxidase subunit II 0.85 BNILDI_22730 cyoE heme o synthase low > 75
Escherichia coli ECOR27 0.68 NOLOHH_01295 cyoA cytochrome o ubiquinol oxidase subunit II 0.85 NOLOHH_01315 cyoE heme o synthase 0.68 31
Escherichia coli BL21 0.68 ECD_00383 cytochrome o ubiquinol oxidase subunit II 0.85 ECD_00379 protoheme IX farnesyltransferase 0.88 3
Escherichia coli ECOR38 0.68 HEPCGN_06975 cyoA cytochrome o ubiquinol oxidase subunit II 0.85 HEPCGN_06995 cyoE heme o synthase 0.72 15
Escherichia coli BW25113 0.68 b0432 cyoA cytochrome o ubiquinol oxidase subunit II (NCBI) 0.85 b0428 cyoE protoheme IX farnesyltransferase (NCBI) 0.95 1
Escherichia coli Nissle 1917 0.68 ECOLIN_RS02595 cytochrome o ubiquinol oxidase subunit II 0.85 ECOLIN_RS02575 heme o synthase 0.81 11
Escherichia fergusonii Becca 0.67 EFB2_03625 Cytochrome bo(3) ubiquinol oxidase subunit 2 0.85 EFB2_03629 Protoheme IX farnesyltransferase low > 86
Escherichia coli ECRC101 0.67 MCAODC_27585 cyoA cytochrome o ubiquinol oxidase subunit II 0.85 MCAODC_27605 cyoE heme o synthase 0.71 12
Enterobacter sp. TBS_079 0.67 MPMX20_01023 Cytochrome bo(3) ubiquinol oxidase subunit 2 0.85 MPMX20_01019 Protoheme IX farnesyltransferase 0.84 2
Escherichia coli ECRC102 0.67 NIAGMN_06415 cyoA cytochrome o ubiquinol oxidase subunit II 0.85 NIAGMN_06435 cyoE heme o synthase — —
Klebsiella michiganensis M5al 0.67 BWI76_RS06495 cytochrome ubiquinol oxidase subunit II 0.84 BWI76_RS06475 protoheme IX farnesyltransferase 0.64 3
Escherichia coli ECRC100 0.67 OKFHMN_08360 cyoA cytochrome o ubiquinol oxidase subunit II 0.85 OKFHMN_08380 cyoE heme o synthase low > 80
Escherichia coli ECRC99 0.67 KEDOAH_19605 cyoA cytochrome o ubiquinol oxidase subunit II 0.85 KEDOAH_19585 cyoE heme o synthase — —
Escherichia coli ECRC98 0.67 JDDGAC_12015 cyoA cytochrome o ubiquinol oxidase subunit II 0.85 JDDGAC_12035 cyoE heme o synthase low > 86
Enterobacter asburiae PDN3 0.66 EX28DRAFT_2539 cytochrome o ubiquinol oxidase subunit II 0.85 EX28DRAFT_2543 protoheme IX farnesyltransferase 0.90 1
Serratia liquefaciens MT49 0.66 IAI46_04985 cytochrome o ubiquinol oxidase subunit II 0.87 IAI46_04965 protoheme IX farnesyltransferase 0.75 6
Pantoea sp. MT58 0.66 IAI47_14680 cytochrome o ubiquinol oxidase subunit II 0.88 IAI47_14700 protoheme IX farnesyltransferase 0.91 2
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.66 GFF4346 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) 0.84 GFF4342 Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB 0.80 2
Erwinia tracheiphila SCR3 0.65 LU632_RS18375 cyoA cytochrome o ubiquinol oxidase subunit II 0.86 LU632_RS18395 cyoE heme o synthase — —
Rahnella sp. WP5 0.65 EX31_RS22220 cytochrome o ubiquinol oxidase subunit II 0.83 EX31_RS22200 protoheme IX farnesyltransferase 0.97 1
Pseudomonas syringae pv. syringae B728a ΔmexB 0.56 Psyr_1141 cytochrome bo3 quinol oxidase subunit 2 0.70 Psyr_1145 Protoheme IX farnesyltransferase — —
Pseudomonas syringae pv. syringae B728a 0.56 Psyr_1141 cytochrome bo3 quinol oxidase subunit 2 0.70 Psyr_1145 Protoheme IX farnesyltransferase — —
Pseudomonas putida KT2440 0.56 PP_0812 cytochrome bo terminal oxidase subunit II 0.68 PP_0816 protoheme IX farnesyltransferase — —
Ralstonia solanacearum UW163 0.54 UW163_RS06965 ubiquinol oxidase subunit II 0.26 UW163_RS02590 protoheme IX farnesyltransferase — —
Ralstonia solanacearum IBSBF1503 0.54 RALBFv3_RS06660 ubiquinol oxidase subunit II 0.26 RALBFv3_RS10990 protoheme IX farnesyltransferase — —
Ralstonia solanacearum PSI07 0.54 RPSI07_RS10565 ubiquinol oxidase subunit II 0.26 RPSI07_RS22315 protoheme IX farnesyltransferase — —
Ralstonia sp. UNC404CL21Col 0.54 ABZR87_RS02335 ubiquinol oxidase subunit II 0.26 ABZR87_RS06845 heme o synthase low > 80
Pseudomonas fluorescens GW456-L13 0.53 PfGW456L13_4936 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) 0.70 PfGW456L13_4932 Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB 0.97 1
Pseudomonas fluorescens SBW25-INTG 0.53 PFLU_RS25220 ubiquinol oxidase subunit II 0.70 PFLU_RS25200 protoheme IX farnesyltransferase 0.94 2
Pseudomonas fluorescens SBW25 0.53 PFLU_RS25220 ubiquinol oxidase subunit II 0.70 PFLU_RS25200 protoheme IX farnesyltransferase 0.97 1
Burkholderia phytofirmans PsJN 0.53 BPHYT_RS24915 ubiquinol oxidase subunit II 0.27 BPHYT_RS02690 protoheme IX farnesyltransferase low > 109
Pseudomonas simiae WCS417 0.53 PS417_23390 ubiquinol oxidase subunit II 0.70 PS417_23370 protoheme IX farnesyltransferase 0.90 2
Pseudomonas fluorescens FW300-N2C3 0.53 AO356_16960 ubiquinol oxidase subunit II 0.68 AO356_16980 protoheme IX farnesyltransferase 0.87 2
Pseudomonas sp. RS175 0.53 PFR28_00242 Cytochrome bo(3) ubiquinol oxidase subunit 2 0.68 PFR28_00246 Protoheme IX farnesyltransferase 0.40 5
Pseudomonas fluorescens FW300-N2E2 0.53 Pf6N2E2_5317 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) 0.68 Pf6N2E2_5321 Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB 0.90 4
Pseudomonas fluorescens FW300-N2E3 0.53 AO353_15450 ubiquinol oxidase subunit II 0.70 AO353_15470 protoheme IX farnesyltransferase 0.90 2
Paraburkholderia sabiae LMG 24235 0.52 QEN71_RS15340 ubiquinol oxidase subunit II 0.27 QEN71_RS01545 heme o synthase low > 153
Pseudomonas fluorescens FW300-N1B4 0.52 Pf1N1B4_973 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) 0.69 Pf1N1B4_969 Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB 0.96 4
Alteromonas macleodii MIT1002 0.52 MIT1002_03929 Ubiquinol oxidase subunit 2 precursor 0.59 MIT1002_03925 Protoheme IX farnesyltransferase low > 70
Shewanella loihica PV-4 0.51 Shew_0366 ubiquinol oxidase, subunit II (RefSeq) 0.57 Shew_0370 protoheme IX farnesyltransferase (RefSeq) low > 60
Ralstonia solanacearum GMI1000 0.51 RS_RS14610 ubiquinol oxidase subunit II 0.26 RS_RS01830 protoheme IX farnesyltransferase 0.50 11
Paraburkholderia graminis OAS925 0.49 ABIE53_005340 cytochrome o ubiquinol oxidase subunit 2 0.27 ABIE53_000683 protoheme IX farnesyltransferase low > 113
Shewanella sp. ANA-3 0.49 Shewana3_4031 ubiquinol oxidase, subunit II (RefSeq) 0.62 Shewana3_4035 protoheme IX farnesyltransferase (RefSeq) 0.63 7
Paraburkholderia bryophila 376MFSha3.1 0.49 H281DRAFT_03426 cytochrome bo3 quinol oxidase subunit 2 (EC 1.10.3.-) 0.27 H281DRAFT_01985 protoheme IX farnesyltransferase low > 103
Cupriavidus basilensis FW507-4G11 0.48 RR42_RS32600 cytochrome O ubiquinol oxidase subunit II 0.26 RR42_RS01920 protoheme IX farnesyltransferase 0.60 2
Sinorhizobium meliloti 1021 0.46 SM_b21487 cytochrome o ubiquinol oxidase subunit II 0.19 SMc00450 protoheme IX farnesyltransferase low > 103
Dyella japonica UNC79MFTsu3.2 0.45 ABZR86_RS07625 ubiquinol oxidase subunit II 0.26 ABZR86_RS12895 heme o synthase 0.58 18
Variovorax sp. SCN45 0.45 GFF5678 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) 0.27 GFF2307 Heme O synthase, protoheme IX farnesyltransferase, COX10-CtaB 0.86 61
Acinetobacter radioresistens SK82 0.42 MPMX26_01162 Cytochrome bo(3) ubiquinol oxidase subunit 2 0.48 MPMX26_01158 Protoheme IX farnesyltransferase 0.94 2
Acidovorax sp. GW101-3H11 0.42 Ac3H11_3141 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) 0.27 Ac3H11_3883 Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB — —
Herbaspirillum seropedicae SmR1 0.40 HSERO_RS12320 cytochrome O ubiquinol oxidase 0.26 HSERO_RS20745 protoheme IX farnesyltransferase — —

Not shown: 2 genomes with orthologs for HER17_RS15875 only; 20 genomes with orthologs for HER17_RS15895 only