Conservation of cofitness between HER17_RS15875 and HER17_RS14940 in Pectobacterium carotovorum WPP14

56 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS15875 cytochrome o ubiquinol oxidase subunit II 1.0 HER17_RS14940 succinate dehydrogenase flavoprotein subunit 0.73 17
Dickeya dadantii 3937 0.82 DDA3937_RS05615 cytochrome o ubiquinol oxidase subunit II 0.93 DDA3937_RS06450 succinate dehydrogenase flavoprotein subunit low > 74
Dickeya dianthicola 67-19 0.82 HGI48_RS05660 cytochrome o ubiquinol oxidase subunit II 0.93 HGI48_RS06490 succinate dehydrogenase flavoprotein subunit low > 71
Dickeya dianthicola ME23 0.81 DZA65_RS05985 cytochrome o ubiquinol oxidase subunit II 0.93 DZA65_RS06835 succinate dehydrogenase flavoprotein subunit low > 75
Escherichia coli ECOR27 0.68 NOLOHH_01295 cyoA cytochrome o ubiquinol oxidase subunit II 0.90 NOLOHH_23325 sdhA succinate dehydrogenase flavoprotein subunit 0.91 1
Escherichia coli HS(pFamp)R (ATCC 700891) 0.68 OHPLBJKB_03241 Cytochrome bo(3) ubiquinol oxidase subunit 2 0.90 OHPLBJKB_02993 Succinate dehydrogenase flavoprotein subunit low > 73
Escherichia coli ECRC62 0.68 BNILDI_22710 cyoA cytochrome o ubiquinol oxidase subunit II 0.90 BNILDI_21320 sdhA succinate dehydrogenase flavoprotein subunit 0.67 28
Escherichia coli BL21 0.68 ECD_00383 cytochrome o ubiquinol oxidase subunit II 0.90 ECD_00683 succinate dehydrogenase, flavoprotein subunit low > 61
Escherichia coli ECOR38 0.68 HEPCGN_06975 cyoA cytochrome o ubiquinol oxidase subunit II 0.90 HEPCGN_01295 sdhA succinate dehydrogenase flavoprotein subunit low > 87
Escherichia coli Nissle 1917 0.68 ECOLIN_RS02595 cytochrome o ubiquinol oxidase subunit II 0.90 ECOLIN_RS03855 succinate dehydrogenase flavoprotein subunit low > 55
Escherichia coli BW25113 0.68 b0432 cyoA cytochrome o ubiquinol oxidase subunit II (NCBI) 0.90 b0723 sdhA succinate dehydrogenase flavoprotein subunit (NCBI) 0.55 26
Escherichia fergusonii Becca 0.67 EFB2_03625 Cytochrome bo(3) ubiquinol oxidase subunit 2 0.90 EFB2_03382 Succinate dehydrogenase flavoprotein subunit low > 86
Escherichia coli ECRC102 0.67 NIAGMN_06415 cyoA cytochrome o ubiquinol oxidase subunit II 0.90 NIAGMN_04990 sdhA succinate dehydrogenase flavoprotein subunit — —
Escherichia coli ECRC101 0.67 MCAODC_27585 cyoA cytochrome o ubiquinol oxidase subunit II 0.90 MCAODC_26160 sdhA succinate dehydrogenase flavoprotein subunit 0.77 7
Enterobacter sp. TBS_079 0.67 MPMX20_01023 Cytochrome bo(3) ubiquinol oxidase subunit 2 0.90 MPMX20_01352 Succinate dehydrogenase flavoprotein subunit 0.64 7
Klebsiella michiganensis M5al 0.67 BWI76_RS06495 cytochrome ubiquinol oxidase subunit II 0.90 BWI76_RS08405 succinate dehydrogenase flavoprotein subunit 0.25 82
Escherichia coli ECRC99 0.67 KEDOAH_19605 cyoA cytochrome o ubiquinol oxidase subunit II 0.90 KEDOAH_21025 sdhA succinate dehydrogenase flavoprotein subunit — —
Escherichia coli ECRC98 0.67 JDDGAC_12015 cyoA cytochrome o ubiquinol oxidase subunit II 0.90 JDDGAC_10595 sdhA succinate dehydrogenase flavoprotein subunit low > 86
Escherichia coli ECRC100 0.67 OKFHMN_08360 cyoA cytochrome o ubiquinol oxidase subunit II 0.90 OKFHMN_06940 sdhA succinate dehydrogenase flavoprotein subunit low > 80
Enterobacter asburiae PDN3 0.66 EX28DRAFT_2539 cytochrome o ubiquinol oxidase subunit II 0.90 EX28DRAFT_2268 succinate dehydrogenase subunit A (EC 1.3.5.1) 0.82 5
Serratia liquefaciens MT49 0.66 IAI46_04985 cytochrome o ubiquinol oxidase subunit II 0.92 IAI46_06265 succinate dehydrogenase flavoprotein subunit 0.54 40
Pantoea sp. MT58 0.66 IAI47_14680 cytochrome o ubiquinol oxidase subunit II 0.88 IAI47_13755 succinate dehydrogenase flavoprotein subunit 0.78 5
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.66 GFF4346 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) 0.90 GFF4637 Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) 0.39 30
Erwinia tracheiphila SCR3 0.65 LU632_RS18375 cyoA cytochrome o ubiquinol oxidase subunit II 0.88 LU632_RS16105 sdhA succinate dehydrogenase flavoprotein subunit — —
Rahnella sp. WP5 0.65 EX31_RS22220 cytochrome o ubiquinol oxidase subunit II 0.90 EX31_RS23430 succinate dehydrogenase flavoprotein subunit 0.68 48
Pseudomonas syringae pv. syringae B728a ΔmexB 0.56 Psyr_1141 cytochrome bo3 quinol oxidase subunit 2 0.69 Psyr_2007 succinate dehydrogenase subunit A — —
Pseudomonas syringae pv. syringae B728a 0.56 Psyr_1141 cytochrome bo3 quinol oxidase subunit 2 0.69 Psyr_2007 succinate dehydrogenase subunit A — —
Pseudomonas putida KT2440 0.56 PP_0812 cytochrome bo terminal oxidase subunit II 0.66 PP_4191 succinate dehydrogenase flavoprotein subunit — —
Ralstonia solanacearum IBSBF1503 0.54 RALBFv3_RS06660 ubiquinol oxidase subunit II 0.55 RALBFv3_RS02640 succinate dehydrogenase flavoprotein subunit — —
Ralstonia solanacearum UW163 0.54 UW163_RS06965 ubiquinol oxidase subunit II 0.55 UW163_RS11085 succinate dehydrogenase flavoprotein subunit — —
Ralstonia solanacearum PSI07 0.54 RPSI07_RS10565 ubiquinol oxidase subunit II 0.56 RPSI07_RS14675 succinate dehydrogenase flavoprotein subunit — —
Ralstonia sp. UNC404CL21Col 0.54 ABZR87_RS02335 ubiquinol oxidase subunit II 0.56 ABZR87_RS14560 succinate dehydrogenase flavoprotein subunit — —
Pseudomonas fluorescens GW456-L13 0.53 PfGW456L13_4936 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) 0.66 PfGW456L13_4271 Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) — —
Pseudomonas simiae WCS417 0.53 PS417_23390 ubiquinol oxidase subunit II 0.67 PS417_08885 succinate dehydrogenase — —
Pseudomonas fluorescens SBW25-INTG 0.53 PFLU_RS25220 ubiquinol oxidase subunit II 0.66 PFLU_RS08945 succinate dehydrogenase flavoprotein subunit — —
Pseudomonas fluorescens SBW25 0.53 PFLU_RS25220 ubiquinol oxidase subunit II 0.66 PFLU_RS08945 succinate dehydrogenase flavoprotein subunit — —
Burkholderia phytofirmans PsJN 0.53 BPHYT_RS24915 ubiquinol oxidase subunit II 0.56 BPHYT_RS33935 succinate dehydrogenase flavoprotein subunit — —
Pseudomonas fluorescens FW300-N2C3 0.53 AO356_16960 ubiquinol oxidase subunit II 0.67 AO356_19685 succinate dehydrogenase — —
Pseudomonas sp. RS175 0.53 PFR28_00242 Cytochrome bo(3) ubiquinol oxidase subunit 2 0.66 PFR28_03098 Succinate dehydrogenase flavoprotein subunit — —
Pseudomonas fluorescens FW300-N2E2 0.53 Pf6N2E2_5317 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) 0.67 Pf6N2E2_5853 Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) — —
Pseudomonas fluorescens FW300-N2E3 0.53 AO353_15450 ubiquinol oxidase subunit II 0.67 AO353_01845 succinate dehydrogenase — —
Paraburkholderia sabiae LMG 24235 0.52 QEN71_RS15340 ubiquinol oxidase subunit II 0.55 QEN71_RS38670 succinate dehydrogenase flavoprotein subunit — —
Pseudomonas fluorescens FW300-N1B4 0.52 Pf1N1B4_973 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) 0.67 Pf1N1B4_3679 Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) — —
Alteromonas macleodii MIT1002 0.52 MIT1002_03929 Ubiquinol oxidase subunit 2 precursor 0.80 MIT1002_01946 Succinate dehydrogenase flavoprotein subunit — —
Shewanella loihica PV-4 0.51 Shew_0366 ubiquinol oxidase, subunit II (RefSeq) 0.76 Shew_1653 sdhA succinate dehydrogenase flavoprotein subunit (RefSeq) — —
Ralstonia solanacearum GMI1000 0.51 RS_RS14610 ubiquinol oxidase subunit II 0.56 RS_RS10020 succinate dehydrogenase flavoprotein subunit — —
Paraburkholderia graminis OAS925 0.49 ABIE53_005340 cytochrome o ubiquinol oxidase subunit 2 0.55 ABIE53_004880 succinate dehydrogenase / fumarate reductase flavoprotein subunit — —
Shewanella sp. ANA-3 0.49 Shewana3_4031 ubiquinol oxidase, subunit II (RefSeq) 0.77 Shewana3_1708 sdhA succinate dehydrogenase flavoprotein subunit (RefSeq) — —
Cupriavidus basilensis FW507-4G11 0.48 RR42_RS32600 cytochrome O ubiquinol oxidase subunit II 0.56 RR42_RS14445 fumarate reductase — —
Sinorhizobium meliloti 1021 0.46 SM_b21487 cytochrome o ubiquinol oxidase subunit II 0.46 SMc02465 succinate dehydrogenase flavoprotein subunit — —
Dyella japonica UNC79MFTsu3.2 0.45 ABZR86_RS07625 ubiquinol oxidase subunit II 0.50 ABZR86_RS06335 succinate dehydrogenase flavoprotein subunit — —
Caulobacter crescentus NA1000 0.45 CCNA_01851 quinol cytochrome oxidase polypeptide II 0.47 CCNA_03642 succinate dehydrogenase flavoprotein subunit — —
Caulobacter crescentus NA1000 Δfur 0.45 CCNA_01851 quinol cytochrome oxidase polypeptide II 0.47 CCNA_03642 succinate dehydrogenase flavoprotein subunit — —
Variovorax sp. SCN45 0.45 GFF5678 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) 0.56 GFF3897 Succinate dehydrogenase flavoprotein subunit (EC 1.3.5.1) — —
Acinetobacter radioresistens SK82 0.42 MPMX26_01162 Cytochrome bo(3) ubiquinol oxidase subunit 2 0.53 MPMX26_00749 Succinate dehydrogenase flavoprotein subunit — —
Acidovorax sp. GW101-3H11 0.42 Ac3H11_3141 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) 0.56 Ac3H11_3158 Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) — —
Herbaspirillum seropedicae SmR1 0.40 HSERO_RS12320 cytochrome O ubiquinol oxidase 0.56 HSERO_RS14905 succinate dehydrogenase flavoprotein subunit — —

Not shown: 1 genomes with orthologs for HER17_RS15875 only; 30 genomes with orthologs for HER17_RS14940 only