Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Pectobacterium carotovorum WPP14 | 1.0 | HER17_RS19675 | | TRAP transporter substrate-binding protein | 1.0 | HER17_RS14705 | | glucokinase | 0.54 | 16 |
Rahnella sp. WP5 | 0.80 | EX31_RS08010 | | TRAP transporter substrate-binding protein | 0.77 | EX31_RS20035 | | glucokinase | low | > 89 |
Enterobacter sp. TBS_079 | 0.75 | MPMX20_04349 | | Solute-binding protein | 0.75 | MPMX20_03281 | | Glucokinase | 0.17 | 39 |
Pantoea sp. MT58 | 0.66 | IAI47_03230 | | TRAP transporter substrate-binding protein | 0.74 | IAI47_05555 | | glucokinase | low | > 76 |
Acidovorax sp. GW101-3H11 | 0.53 | Ac3H11_3957 | | TRAP-type C4-dicarboxylate transport system, periplasmic component | 0.31 | Ac3H11_2067 | | Glucokinase (EC 2.7.1.2) | low | > 79 |
Pseudomonas putida KT2440 | 0.50 | PP_1169 | | D-glucuronate / D-galacturonate TRAP transporter, solute receptor component (from data) | 0.33 | PP_1011 | | glucokinase | low | > 96 |
Pseudomonas stutzeri RCH2 | 0.50 | Psest_0363 | | tripartite ATP-independent periplasmic transporter solute receptor, DctP family | 0.29 | Psest_1893 | | glucokinase, proteobacterial type | low | > 67 |
Pseudomonas simiae WCS417 | 0.49 | PS417_17370 | | C4-dicarboxylate ABC transporter | 0.30 | PS417_22685 | | Glucokinase (EC 2.7.1.2) (from data) | low | > 88 |
Pseudomonas fluorescens FW300-N2E2 | 0.49 | Pf6N2E2_487 | | TRAP-type C4-dicarboxylate transport system, periplasmic component | 0.28 | Pf6N2E2_2897 | | Glucokinase (EC 2.7.1.2) | low | > 103 |
Pseudomonas fluorescens SBW25-INTG | 0.49 | PFLU_RS19295 | | TRAP transporter substrate-binding protein | 0.31 | PFLU_RS24325 | | glucokinase | low | > 109 |
Pseudomonas fluorescens SBW25 | 0.49 | PFLU_RS19295 | | TRAP transporter substrate-binding protein | 0.31 | PFLU_RS24325 | | glucokinase | low | > 109 |
Pseudomonas sp. RS175 | 0.48 | PFR28_02438 | | Solute-binding protein | 0.27 | PFR28_00562 | | Glucokinase | low | > 88 |
Pseudomonas syringae pv. syringae B728a | 0.47 | Psyr_0900 | | TRAP dicarboxylate transporter- DctP subunit | 0.30 | Psyr_1110 | | glucokinase | low | > 86 |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.47 | Psyr_0900 | | TRAP dicarboxylate transporter- DctP subunit | 0.30 | Psyr_1110 | | glucokinase | low | > 86 |
Pseudomonas fluorescens FW300-N2C3 | 0.47 | AO356_23055 | | C4-dicarboxylate ABC transporter | 0.27 | AO356_05215 | | glucokinase | low | > 104 |
Azospirillum brasilense Sp245 | 0.36 | AZOBR_RS30130 | | C4-dicarboxylate ABC transporter | 0.38 | AZOBR_RS05405 | | glucokinase | low | > 97 |
Bosea sp. OAE506 | 0.35 | ABIE41_RS07830 | | TRAP transporter substrate-binding protein | 0.21 | ABIE41_RS11090 | | glucokinase | low | > 77 |
Agrobacterium fabrum C58 | 0.35 | Atu3137 | | C4-dicarboxylate-binding protein | 0.32 | Atu0184 | | glucokinase | low | > 89 |
Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.35 | GFF797 | | TRAP-type C4-dicarboxylate transport system, periplasmic component | 0.31 | GFF1626 | | Glucokinase (EC 2.7.1.2) | low | > 90 |
Sinorhizobium meliloti 1021 | 0.34 | SM_b21353 | | periplasmic C4-dicarboxylate transport protein | 0.31 | SMc02835 | | glucokinase | low | > 103 |
Azospirillum sp. SherDot2 | 0.33 | MPMX19_05801 | | Solute-binding protein | 0.40 | MPMX19_02240 | | Glucokinase | low | > 112 |
Caulobacter crescentus NA1000 | 0.30 | CCNA_01513 | | C4-dicarboxylate-binding protein | 0.32 | CCNA_02133 | | glucokinase | low | > 66 |
Caulobacter crescentus NA1000 Δfur | 0.30 | CCNA_01513 | | C4-dicarboxylate-binding protein | 0.32 | CCNA_02133 | | glucokinase | low | > 67 |
Alteromonas macleodii MIT1002 | 0.30 | MIT1002_02426 | | Extracytoplasmic solute receptor protein YiaO | 0.37 | MIT1002_02404 | | Glucokinase | low | > 70 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.30 | OHPLBJKB_03838 | | Solute-binding protein | 0.78 | OHPLBJKB_01333 | | Glucokinase | 0.38 | 71 |
Escherichia coli ECRC62 | 0.29 | BNILDI_07130 | | Bacterial extracellular solute-binding protein, family 7 | 0.78 | BNILDI_12860 | glk | glucokinase | low | > 75 |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.29 | GFF3130 | | TRAP-type C4-dicarboxylate transport system, periplasmic component | 0.77 | GFF1972 | | Glucokinase (EC 2.7.1.2) | low | > 78 |
Klebsiella michiganensis M5al | 0.29 | BWI76_RS24125 | | hypothetical protein | 0.75 | BWI76_RS20510 | | glucokinase | low | > 92 |
Ralstonia sp. UNC404CL21Col | 0.28 | ABZR87_RS21090 | | TRAP transporter substrate-binding protein | 0.34 | ABZR87_RS22905 | | glucokinase | low | > 80 |
Escherichia coli Nissle 1917 | 0.28 | ECOLIN_RS17380 | | TRAP transporter substrate-binding protein | 0.78 | ECOLIN_RS13735 | | glucokinase | low | > 55 |
Lysobacter sp. OAE881 | 0.28 | ABIE51_RS02850 | | TRAP transporter substrate-binding protein | 0.30 | ABIE51_RS08865 | | glucokinase | low | > 62 |
Xanthomonas campestris pv. campestris strain 8004 | 0.27 | Xcc-8004.201.1 | | TRAP-type C4-dicarboxylate transport system, periplasmic component | 0.29 | Xcc-8004.2449.1 | | Glucokinase (EC 2.7.1.2) | low | > 74 |
Serratia liquefaciens MT49 | 0.27 | IAI46_00375 | | TRAP transporter substrate-binding protein | 0.77 | IAI46_18215 | | glucokinase | low | > 86 |
Escherichia coli ECOR27 | 0.26 | NOLOHH_11100 | | Bacterial extracellular solute-binding protein, family 7 | 0.78 | NOLOHH_14010 | glk | glucokinase | low | > 75 |
Escherichia coli ECOR38 | 0.26 | HEPCGN_18535 | | Bacterial extracellular solute-binding protein, family 7 | 0.78 | HEPCGN_21530 | glk | glucokinase | low | > 87 |
Escherichia fergusonii Becca | 0.24 | EFB2_00227 | | 2,3-diketo-L-gulonate-binding periplasmic protein YiaO | 0.78 | EFB2_01486 | | Glucokinase | low | > 86 |
Escherichia coli BL21 | 0.24 | ECD_03431 | | 2,3-diketo-L-gulonate-binding periplasmic protein | 0.78 | ECD_02298 | | glucokinase | low | > 61 |
Escherichia coli BW25113 | 0.24 | b3579 | yiaO | predicted transporter (NCBI) | 0.78 | b2388 | glk | glucokinase (NCBI) | low | > 76 |
Herbaspirillum seropedicae SmR1 | 0.21 | HSERO_RS04240 | | C4-dicarboxylate ABC transporter | 0.35 | HSERO_RS17870 | | glucokinase | low | > 78 |
Magnetospirillum magneticum AMB-1 | 0.20 | AMB_RS04560 | | C4-dicarboxylate ABC transporter | 0.37 | AMB_RS10655 | | glucokinase | low | > 64 |
Rhodospirillum rubrum S1H | 0.20 | Rru_A3678 | | TRAP dicarboxylate transporter- DctP subunit (NCBI) | 0.31 | Rru_A2486 | | Glucokinase (NCBI) | low | > 58 |
Dinoroseobacter shibae DFL-12 | 0.19 | Dshi_3326 | | TRAP dicarboxylate transporter, DctP subunit (RefSeq) | 0.20 | Dshi_1655 | | glucokinase (EC 2.7.1.2) (from data) | low | > 64 |
Cupriavidus basilensis FW507-4G11 | 0.18 | RR42_RS10600 | | C4-dicarboxylate ABC transporter substrate-binding protein | 0.37 | RR42_RS37395 | | glucokinase | low | > 128 |
Desulfovibrio vulgaris Miyazaki F | 0.17 | DvMF_1932 | | TRAP dicarboxylate transporter, DctP subunit (RefSeq) | 0.13 | DvMF_0900 | | Glucokinase (RefSeq) | low | > 51 |
Rhizobium sp. OAE497 | 0.17 | ABIE40_RS25820 | | sialic acid TRAP transporter substrate-binding protein SiaP | 0.28 | ABIE40_RS00595 | | glucokinase | low | > 107 |
Desulfovibrio vulgaris Hildenborough JW710 | 0.17 | DVU0011 | | TRAP dicarboxylate family transporter (TIGR) | 0.11 | DVU1035 | glk | glucokinase, putative (TIGR) | low | > 55 |
Phaeobacter inhibens DSM 17395 | 0.15 | PGA1_c20680 | | TRAP transporter for fumarate, succinate, L-malate, and 2-oxogulatarate, substrate-binding component (from data) | 0.11 | PGA1_c05420 | | glucokinase (EC 2.7.1.2) (from data) | low | > 62 |
Pseudomonas sp. S08-1 | 0.11 | OH686_16140 | | TRAP-type transporter, substrate-binding protein | 0.29 | OH686_02485 | | glucokinase | low | > 80 |
Not shown: 12 genomes with orthologs for HER17_RS19675 only; 24 genomes with orthologs for HER17_RS14705 only