Conservation of cofitness between HER17_RS19675 and HER17_RS14705 in Pectobacterium carotovorum WPP14

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS19675 TRAP transporter substrate-binding protein 1.0 HER17_RS14705 glucokinase 0.54 16
Rahnella sp. WP5 0.80 EX31_RS08010 TRAP transporter substrate-binding protein 0.77 EX31_RS20035 glucokinase low > 89
Enterobacter sp. TBS_079 0.75 MPMX20_04349 Solute-binding protein 0.75 MPMX20_03281 Glucokinase 0.17 39
Pantoea sp. MT58 0.66 IAI47_03230 TRAP transporter substrate-binding protein 0.74 IAI47_05555 glucokinase low > 76
Acidovorax sp. GW101-3H11 0.53 Ac3H11_3957 TRAP-type C4-dicarboxylate transport system, periplasmic component 0.31 Ac3H11_2067 Glucokinase (EC 2.7.1.2) low > 79
Pseudomonas putida KT2440 0.50 PP_1169 D-glucuronate / D-galacturonate TRAP transporter, solute receptor component (from data) 0.33 PP_1011 glucokinase low > 96
Pseudomonas stutzeri RCH2 0.50 Psest_0363 tripartite ATP-independent periplasmic transporter solute receptor, DctP family 0.29 Psest_1893 glucokinase, proteobacterial type low > 67
Pseudomonas simiae WCS417 0.49 PS417_17370 C4-dicarboxylate ABC transporter 0.30 PS417_22685 Glucokinase (EC 2.7.1.2) (from data) low > 88
Pseudomonas fluorescens FW300-N2E2 0.49 Pf6N2E2_487 TRAP-type C4-dicarboxylate transport system, periplasmic component 0.28 Pf6N2E2_2897 Glucokinase (EC 2.7.1.2) low > 103
Pseudomonas fluorescens SBW25-INTG 0.49 PFLU_RS19295 TRAP transporter substrate-binding protein 0.31 PFLU_RS24325 glucokinase low > 109
Pseudomonas fluorescens SBW25 0.49 PFLU_RS19295 TRAP transporter substrate-binding protein 0.31 PFLU_RS24325 glucokinase low > 109
Pseudomonas sp. RS175 0.48 PFR28_02438 Solute-binding protein 0.27 PFR28_00562 Glucokinase low > 88
Pseudomonas syringae pv. syringae B728a 0.47 Psyr_0900 TRAP dicarboxylate transporter- DctP subunit 0.30 Psyr_1110 glucokinase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.47 Psyr_0900 TRAP dicarboxylate transporter- DctP subunit 0.30 Psyr_1110 glucokinase low > 86
Pseudomonas fluorescens FW300-N2C3 0.47 AO356_23055 C4-dicarboxylate ABC transporter 0.27 AO356_05215 glucokinase low > 104
Azospirillum brasilense Sp245 0.36 AZOBR_RS30130 C4-dicarboxylate ABC transporter 0.38 AZOBR_RS05405 glucokinase low > 97
Bosea sp. OAE506 0.35 ABIE41_RS07830 TRAP transporter substrate-binding protein 0.21 ABIE41_RS11090 glucokinase low > 77
Agrobacterium fabrum C58 0.35 Atu3137 C4-dicarboxylate-binding protein 0.32 Atu0184 glucokinase low > 89
Hydrogenophaga sp. GW460-11-11-14-LB1 0.35 GFF797 TRAP-type C4-dicarboxylate transport system, periplasmic component 0.31 GFF1626 Glucokinase (EC 2.7.1.2) low > 90
Sinorhizobium meliloti 1021 0.34 SM_b21353 periplasmic C4-dicarboxylate transport protein 0.31 SMc02835 glucokinase low > 103
Azospirillum sp. SherDot2 0.33 MPMX19_05801 Solute-binding protein 0.40 MPMX19_02240 Glucokinase low > 112
Caulobacter crescentus NA1000 0.30 CCNA_01513 C4-dicarboxylate-binding protein 0.32 CCNA_02133 glucokinase low > 66
Caulobacter crescentus NA1000 Δfur 0.30 CCNA_01513 C4-dicarboxylate-binding protein 0.32 CCNA_02133 glucokinase low > 67
Alteromonas macleodii MIT1002 0.30 MIT1002_02426 Extracytoplasmic solute receptor protein YiaO 0.37 MIT1002_02404 Glucokinase low > 70
Escherichia coli HS(pFamp)R (ATCC 700891) 0.30 OHPLBJKB_03838 Solute-binding protein 0.78 OHPLBJKB_01333 Glucokinase 0.38 71
Escherichia coli ECRC62 0.29 BNILDI_07130 Bacterial extracellular solute-binding protein, family 7 0.78 BNILDI_12860 glk glucokinase low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.29 GFF3130 TRAP-type C4-dicarboxylate transport system, periplasmic component 0.77 GFF1972 Glucokinase (EC 2.7.1.2) low > 78
Klebsiella michiganensis M5al 0.29 BWI76_RS24125 hypothetical protein 0.75 BWI76_RS20510 glucokinase low > 92
Ralstonia sp. UNC404CL21Col 0.28 ABZR87_RS21090 TRAP transporter substrate-binding protein 0.34 ABZR87_RS22905 glucokinase low > 80
Escherichia coli Nissle 1917 0.28 ECOLIN_RS17380 TRAP transporter substrate-binding protein 0.78 ECOLIN_RS13735 glucokinase low > 55
Lysobacter sp. OAE881 0.28 ABIE51_RS02850 TRAP transporter substrate-binding protein 0.30 ABIE51_RS08865 glucokinase low > 62
Xanthomonas campestris pv. campestris strain 8004 0.27 Xcc-8004.201.1 TRAP-type C4-dicarboxylate transport system, periplasmic component 0.29 Xcc-8004.2449.1 Glucokinase (EC 2.7.1.2) low > 74
Serratia liquefaciens MT49 0.27 IAI46_00375 TRAP transporter substrate-binding protein 0.77 IAI46_18215 glucokinase low > 86
Escherichia coli ECOR27 0.26 NOLOHH_11100 Bacterial extracellular solute-binding protein, family 7 0.78 NOLOHH_14010 glk glucokinase low > 75
Escherichia coli ECOR38 0.26 HEPCGN_18535 Bacterial extracellular solute-binding protein, family 7 0.78 HEPCGN_21530 glk glucokinase low > 87
Escherichia fergusonii Becca 0.24 EFB2_00227 2,3-diketo-L-gulonate-binding periplasmic protein YiaO 0.78 EFB2_01486 Glucokinase low > 86
Escherichia coli BL21 0.24 ECD_03431 2,3-diketo-L-gulonate-binding periplasmic protein 0.78 ECD_02298 glucokinase low > 61
Escherichia coli BW25113 0.24 b3579 yiaO predicted transporter (NCBI) 0.78 b2388 glk glucokinase (NCBI) low > 76
Herbaspirillum seropedicae SmR1 0.21 HSERO_RS04240 C4-dicarboxylate ABC transporter 0.35 HSERO_RS17870 glucokinase low > 78
Magnetospirillum magneticum AMB-1 0.20 AMB_RS04560 C4-dicarboxylate ABC transporter 0.37 AMB_RS10655 glucokinase low > 64
Rhodospirillum rubrum S1H 0.20 Rru_A3678 TRAP dicarboxylate transporter- DctP subunit (NCBI) 0.31 Rru_A2486 Glucokinase (NCBI) low > 58
Dinoroseobacter shibae DFL-12 0.19 Dshi_3326 TRAP dicarboxylate transporter, DctP subunit (RefSeq) 0.20 Dshi_1655 glucokinase (EC 2.7.1.2) (from data) low > 64
Cupriavidus basilensis FW507-4G11 0.18 RR42_RS10600 C4-dicarboxylate ABC transporter substrate-binding protein 0.37 RR42_RS37395 glucokinase low > 128
Desulfovibrio vulgaris Miyazaki F 0.17 DvMF_1932 TRAP dicarboxylate transporter, DctP subunit (RefSeq) 0.13 DvMF_0900 Glucokinase (RefSeq) low > 51
Rhizobium sp. OAE497 0.17 ABIE40_RS25820 sialic acid TRAP transporter substrate-binding protein SiaP 0.28 ABIE40_RS00595 glucokinase low > 107
Desulfovibrio vulgaris Hildenborough JW710 0.17 DVU0011 TRAP dicarboxylate family transporter (TIGR) 0.11 DVU1035 glk glucokinase, putative (TIGR) low > 55
Phaeobacter inhibens DSM 17395 0.15 PGA1_c20680 TRAP transporter for fumarate, succinate, L-malate, and 2-oxogulatarate, substrate-binding component (from data) 0.11 PGA1_c05420 glucokinase (EC 2.7.1.2) (from data) low > 62
Pseudomonas sp. S08-1 0.11 OH686_16140 TRAP-type transporter, substrate-binding protein 0.29 OH686_02485 glucokinase low > 80

Not shown: 12 genomes with orthologs for HER17_RS19675 only; 24 genomes with orthologs for HER17_RS14705 only