Conservation of cofitness between HER17_RS02310 and HER17_RS14605 in Pectobacterium carotovorum WPP14

55 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS02310 methionine synthase 1.0 HER17_RS14605 protein-tyrosine-phosphatase 0.65 5
Dickeya dianthicola ME23 0.88 DZA65_RS20250 methionine synthase 0.76 DZA65_RS07090 protein-tyrosine-phosphatase low > 75
Rahnella sp. WP5 0.88 EX31_RS11760 methionine synthase 0.61 EX31_RS02930 protein-tyrosine-phosphatase low > 89
Dickeya dadantii 3937 0.88 DDA3937_RS19040 methionine synthase 0.77 DDA3937_RS06715 protein-tyrosine-phosphatase low > 74
Serratia liquefaciens MT49 0.88 IAI46_23155 methionine synthase 0.74 IAI46_08015 protein tyrosine phosphatase low > 86
Klebsiella michiganensis M5al 0.88 BWI76_RS01685 methionine synthase 0.62 BWI76_RS19085 protein-tyrosine-phosphatase low > 92
Enterobacter asburiae PDN3 0.87 EX28DRAFT_4326 methionine synthase (B12-dependent) (EC 2.1.1.13) 0.68 EX28DRAFT_0494 Protein-tyrosine-phosphatase low > 76
Dickeya dianthicola 67-19 0.87 HGI48_RS19130 methionine synthase 0.76 HGI48_RS06735 protein-tyrosine-phosphatase low > 71
Enterobacter sp. TBS_079 0.87 MPMX20_00235 Methionine synthase 0.67 MPMX20_03043 Low molecular weight protein-tyrosine-phosphatase Wzb low > 85
Escherichia coli BL21 0.87 ECD_03891 homocysteine-N5-methyltetrahydrofolate transmethylase, B12-dependent 0.66 ECD_01967 colanic acid production protein-tyrosine-phosphatase; Wzc-P dephosphorylase — —
Escherichia coli ECRC102 0.87 NIAGMN_10990 metH methionine synthase 0.66 NIAGMN_22250 wzb low molecular weight protein-tyrosine-phosphatase Wzb — —
Escherichia coli ECRC101 0.87 MCAODC_03740 metH methionine synthase 0.66 MCAODC_20635 wzb low molecular weight protein-tyrosine-phosphatase Wzb low > 87
Escherichia coli ECRC99 0.87 KEDOAH_14920 metH methionine synthase 0.66 KEDOAH_03845 wzb low molecular weight protein-tyrosine-phosphatase Wzb — —
Escherichia coli ECRC100 0.87 OKFHMN_13240 metH methionine synthase 0.66 OKFHMN_24305 wzb low molecular weight protein-tyrosine-phosphatase Wzb low > 80
Escherichia coli BW25113 0.87 b4019 metH B12-dependent methionine synthase (NCBI) 0.66 b2061 wzb protein-tyrosine phosphatase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.87 OHPLBJKB_04030 Methionine synthase 0.60 OHPLBJKB_01650 putative low molecular weight protein-tyrosine-phosphatase AmsI — —
Escherichia coli ECRC98 0.87 JDDGAC_16865 metH methionine synthase 0.66 JDDGAC_28415 wzb low molecular weight protein-tyrosine-phosphatase Wzb low > 86
Escherichia coli ECOR38 0.87 HEPCGN_11885 metH methionine synthase 0.66 HEPCGN_03005 wzb low molecular weight protein-tyrosine-phosphatase Wzb low > 87
Escherichia coli ECRC62 0.87 BNILDI_06140 metH methionine synthase 0.66 BNILDI_14545 wzb low molecular weight protein-tyrosine-phosphatase Wzb low > 75
Escherichia coli ECOR27 0.87 NOLOHH_05380 metH methionine synthase 0.66 NOLOHH_15635 wzb low molecular weight protein-tyrosine-phosphatase Wzb low > 75
Escherichia coli Nissle 1917 0.87 ECOLIN_RS23160 methionine synthase 0.66 ECOLIN_RS12135 low molecular weight protein-tyrosine-phosphatase Wzb — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.86 GFF1358 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) 0.67 GFF3867 Low molecular weight protein-tyrosine-phosphatase Wzb (EC 3.1.3.48) low > 78
Escherichia fergusonii Becca 0.86 EFB2_04592 Methionine synthase 0.66 EFB2_01793 Low molecular weight protein-tyrosine-phosphatase Wzb low > 86
Pantoea sp. MT58 0.86 IAI47_17990 methionine synthase 0.68 IAI47_06935 protein tyrosine phosphatase — —
Vibrio cholerae E7946 ATCC 55056 0.76 CSW01_02060 methionine synthase 0.24 CSW01_05295 low molecular weight phosphotyrosine protein phosphatase low > 62
Shewanella amazonensis SB2B 0.66 Sama_0758 metH B12-dependent methionine synthase (RefSeq) 0.24 Sama_1994 protein tyrosine phosphatase (RefSeq) low > 62
Pseudomonas sp. S08-1 0.66 OH686_03335 methionine synthase 0.23 OH686_22075 Low molecular weight protein tyrosine phosphatase low > 80
Shewanella sp. ANA-3 0.66 Shewana3_3282 metH B12-dependent methionine synthase (RefSeq) 0.24 Shewana3_2399 protein tyrosine phosphatase (RefSeq) low > 73
Pseudomonas simiae WCS417 0.66 PS417_12310 methionine synthase 0.23 PS417_16320 protein tyrosine phosphatase low > 88
Pseudomonas stutzeri RCH2 0.66 Psest_2102 5-methyltetrahydrofolate--homocysteine methyltransferase 0.49 Psest_1839 Protein-tyrosine-phosphatase — —
Pseudomonas sp. RS175 0.66 PFR28_01369 Methionine synthase 0.23 PFR28_03025 Putative low molecular weight protein-tyrosine-phosphatase low > 88
Shewanella oneidensis MR-1 0.66 SO1030 metH 5-methyltetrahydrofolate--homocysteine methyltransferase (NCBI ptt file) 0.26 SO2208 phosphotyrosine protein phosphatase (NCBI ptt file) low > 76
Pseudomonas fluorescens SBW25 0.66 PFLU_RS13000 methionine synthase 0.48 PFLU_RS17940 low molecular weight phosphotyrosine protein phosphatase low > 109
Pseudomonas fluorescens SBW25-INTG 0.66 PFLU_RS13000 methionine synthase 0.48 PFLU_RS17940 low molecular weight phosphotyrosine protein phosphatase low > 109
Pseudomonas fluorescens FW300-N2C3 0.66 AO356_00545 methionine synthase 0.23 AO356_20090 protein tyrosine phosphatase low > 104
Pseudomonas putida KT2440 0.65 PP_2375 cobalamin-dependent methionine synthase 0.22 PP_1903 putative phosphotyrosine-protein phosphatase low > 96
Pseudomonas fluorescens FW300-N2E2 0.65 Pf6N2E2_2068 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) 0.23 Pf6N2E2_5936 Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48) low > 103
Pseudomonas fluorescens FW300-N2E3 0.65 AO353_21615 methionine synthase 0.24 AO353_01435 protein tyrosine phosphatase low > 101
Pseudomonas syringae pv. syringae B728a 0.65 Psyr_2464 methionine synthase (B12-dependent) 0.44 Psyr_3224 Low molecular weight phosphotyrosine protein phosphatase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.65 Psyr_2464 methionine synthase (B12-dependent) 0.44 Psyr_3224 Low molecular weight phosphotyrosine protein phosphatase low > 86
Shewanella loihica PV-4 0.64 Shew_0710 metH B12-dependent methionine synthase (RefSeq) 0.22 Shew_1588 protein tyrosine phosphatase (RefSeq) low > 60
Kangiella aquimarina DSM 16071 0.64 B158DRAFT_2466 methionine synthase (B12-dependent) (EC 2.1.1.13) 0.21 B158DRAFT_1602 Protein-tyrosine-phosphatase low > 40
Marinobacter adhaerens HP15 0.63 HP15_1792 B12-dependent methionine synthase 0.49 HP15_p187g45 protein-tyrosine phosphatase, low molecular weight low > 73
Acinetobacter radioresistens SK82 0.62 MPMX26_02351 Methionine synthase 0.32 MPMX26_00048 Low molecular weight protein-tyrosine-phosphatase Ptp low > 36
Dechlorosoma suillum PS 0.61 Dsui_0779 5-methyltetrahydrofolate--homocysteine methyltransferase 0.23 Dsui_2435 protein-tyrosine-phosphatase — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.60 ABZR88_RS20930 methionine synthase 0.20 ABZR88_RS20245 low molecular weight protein-tyrosine-phosphatase low > 71
Rhizobium sp. OAE497 0.60 ABIE40_RS12135 methionine synthase 0.27 ABIE40_RS18225 low molecular weight protein-tyrosine-phosphatase low > 107
Agrobacterium fabrum C58 0.60 Atu2155 methionine synthase 0.23 Atu2677 protein tyrosine phosphatase low > 89
Pedobacter sp. GW460-11-11-14-LB5 0.59 CA265_RS23440 methionine synthase 0.23 CA265_RS23830 protein tyrosine phosphatase low > 88
Castellaniella sp019104865 MT123 0.57 ABCV34_RS14560 methionine synthase 0.23 ABCV34_RS05105 low molecular weight protein-tyrosine-phosphatase — —
Parabacteroides merdae CL09T00C40 0.49 HMPREF1078_RS14955 methionine synthase 0.21 HMPREF1078_RS13055 low molecular weight protein-tyrosine-phosphatase low > 61
Synechococcus elongatus PCC 7942 0.22 Synpcc7942_1372 metH methionine synthase (B12-dependent) 0.24 Synpcc7942_0463 protein tyrosine phosphatase — —
Mycobacterium tuberculosis H37Rv 0.22 Rv2124c 5-methyltetrahydrofolate--homocystein methyltransferase MetH (methionine synthase, vitamin-B12 dependent isozyme) (ms) 0.17 Rv2234 Phosphotyrosine protein phosphatase PtpA (protein-tyrosine-phosphatase) (PTPase) (LMW phosphatase) low > 58
Magnetospirillum magneticum AMB-1 0.21 AMB_RS02225 methionine synthase 0.25 AMB_RS04425 low molecular weight phosphotyrosine protein phosphatase — —
Azospirillum sp. SherDot2 0.21 MPMX19_00637 Methionine synthase 0.22 MPMX19_02649 Putative low molecular weight protein-tyrosine-phosphatase — —
Rhodospirillum rubrum S1H 0.21 Rru_A1531 5-methyltetrahydrofolate--homocysteine methyltransferase (NCBI) 0.23 Rru_A3646 Protein tyrosine phosphatase (NCBI) — —

Not shown: 7 genomes with orthologs for HER17_RS02310 only; 26 genomes with orthologs for HER17_RS14605 only