Conservation of cofitness between HER17_RS10965 and HER17_RS11210 in Pectobacterium carotovorum WPP14

54 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS10965 acyl-CoA thioester hydrolase YciA 1.0 HER17_RS11210 SpoVR family protein 0.73 3
Dickeya dianthicola ME23 0.89 DZA65_RS10910 acyl-CoA thioester hydrolase YciA 0.91 DZA65_RS11545 SpoVR family protein low > 75
Dickeya dadantii 3937 0.89 DDA3937_RS10430 acyl-CoA thioester hydrolase YciA 0.91 DDA3937_RS11175 SpoVR family protein low > 74
Dickeya dianthicola 67-19 0.88 HGI48_RS10435 acyl-CoA thioester hydrolase YciA 0.91 HGI48_RS11200 SpoVR family protein low > 71
Rahnella sp. WP5 0.85 EX31_RS10010 acyl-CoA thioester hydrolase YciA 0.87 EX31_RS10500 SpoVR family protein low > 89
Serratia liquefaciens MT49 0.84 IAI46_14085 acyl-CoA thioester hydrolase YciA 0.89 IAI46_14470 SpoVR family protein low > 86
Enterobacter asburiae PDN3 0.80 EX28DRAFT_0923 Acyl-CoA hydrolase 0.86 EX28DRAFT_0765 Uncharacterized conserved protein low > 76
Pantoea sp. MT58 0.80 IAI47_09135 acyl-CoA thioester hydrolase YciA 0.86 IAI47_08885 SpoVR family protein low > 76
Enterobacter sp. TBS_079 0.80 MPMX20_02575 putative acyl-CoA thioester hydrolase 0.86 MPMX20_02700 hypothetical protein low > 85
Klebsiella michiganensis M5al 0.79 BWI76_RS11790 acyl-CoA thioesterase 0.86 BWI76_RS17740 SpoVR family protein low > 92
Escherichia coli BW25113 0.79 b1253 yciA predicted hydrolase (NCBI) 0.86 b1188 ycgB ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) low > 76
Escherichia coli ECOR27 0.79 NOLOHH_20370 yciA acyl-CoA thioester hydrolase YciA 0.86 NOLOHH_20730 ycgB SpoVR family protein low > 75
Escherichia fergusonii Becca 0.79 EFB2_02672 putative acyl-CoA thioester hydrolase 0.86 EFB2_02744 hypothetical protein low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.79 OHPLBJKB_02430 putative acyl-CoA thioester hydrolase 0.86 OHPLBJKB_02501 hypothetical protein low > 73
Escherichia coli Nissle 1917 0.79 ECOLIN_RS07565 acyl-CoA thioester hydrolase YciA 0.86 ECOLIN_RS07180 SpoVR family protein low > 55
Escherichia coli ECRC62 0.79 BNILDI_18515 yciA acyl-CoA thioester hydrolase YciA 0.86 BNILDI_18895 ycgB SpoVR family protein low > 75
Escherichia coli BL21 0.79 ECD_01227 acyl-CoA esterase 0.86 ECD_01163 SpoVR family stationary phase protein low > 61
Escherichia coli ECOR38 0.79 HEPCGN_25145 yciA acyl-CoA thioester hydrolase YciA 0.86 HEPCGN_24745 ycgB SpoVR family protein low > 87
Escherichia coli ECRC101 0.79 MCAODC_21580 yciA acyl-CoA thioester hydrolase YciA 0.86 MCAODC_21885 ycgB SpoVR family protein low > 87
Escherichia coli ECRC100 0.79 OKFHMN_28680 yciA acyl-CoA thioester hydrolase YciA 0.86 OKFHMN_28285 ycgB SpoVR family protein low > 80
Escherichia coli ECRC102 0.79 NIAGMN_27555 yciA acyl-CoA thioester hydrolase YciA 0.86 NIAGMN_27935 ycgB SpoVR family protein — —
Escherichia coli ECRC99 0.79 KEDOAH_25675 yciA acyl-CoA thioester hydrolase YciA 0.86 KEDOAH_25300 ycgB SpoVR family protein — —
Escherichia coli ECRC98 0.79 JDDGAC_05895 yciA acyl-CoA thioester hydrolase YciA 0.86 JDDGAC_06225 ycgB SpoVR family protein low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.77 GFF2735 Acyl-CoA thioesterase YciA, involved in membrane biogenesis 0.87 GFF2805 FIG004684: SpoVR-like protein low > 78
Vibrio cholerae E7946 ATCC 55056 0.61 CSW01_08560 acyl-CoA thioester hydrolase YciA 0.77 CSW01_09390 SpoVR family protein low > 62
Azospirillum brasilense Sp245 0.47 AZOBR_RS22235 acyl-CoA thioester hydrolase 0.51 AZOBR_RS12645 SpoVR family protein low > 97
Azospirillum sp. SherDot2 0.45 MPMX19_00971 putative acyl-CoA thioester hydrolase 0.49 MPMX19_02155 hypothetical protein low > 112
Pseudomonas syringae pv. syringae B728a ΔmexB 0.44 Psyr_5043 Thioesterase superfamily 0.69 Psyr_4633 SpoVR low > 86
Pseudomonas syringae pv. syringae B728a 0.44 Psyr_5043 Thioesterase superfamily 0.69 Psyr_4633 SpoVR low > 86
Pseudomonas sp. RS175 0.44 PFR28_04491 putative acyl-CoA thioester hydrolase 0.69 PFR28_04070 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2C3 0.44 AO356_11055 long-chain acyl-CoA thioester hydrolase 0.69 AO356_14305 ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) 0.35 8
Pseudomonas fluorescens FW300-N2E2 0.44 Pf6N2E2_4077 cytosolic long-chain acyl-CoA thioester hydrolase family protein 0.67 Pf6N2E2_4799 ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) low > 103
Pseudomonas fluorescens SBW25 0.43 PFLU_RS29780 acyl-CoA thioesterase 0.68 PFLU_RS27495 SpoVR family protein low > 109
Pseudomonas simiae WCS417 0.43 PS417_28095 long-chain acyl-CoA thioester hydrolase 0.68 PS417_25840 SpoVR family protein — —
Pseudomonas fluorescens SBW25-INTG 0.43 PFLU_RS29780 acyl-CoA thioesterase 0.68 PFLU_RS27495 SpoVR family protein low > 109
Pseudomonas putida KT2440 0.43 PP_5331 Long-chain acyl-CoA thioester hydrolase 0.67 PP_0395 putative type IV piliation protein low > 96
Pseudomonas fluorescens GW456-L13 0.43 PfGW456L13_751 cytosolic long-chain acyl-CoA thioester hydrolase family protein 0.68 PfGW456L13_1194 FIG004684: SpoVR-like protein low > 87
Pseudomonas fluorescens FW300-N2E3 0.43 AO353_09915 long-chain acyl-CoA thioester hydrolase 0.67 AO353_07345 ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) low > 101
Pseudomonas fluorescens FW300-N1B4 0.43 Pf1N1B4_2032 cytosolic long-chain acyl-CoA thioester hydrolase family protein 0.67 Pf1N1B4_2521 FIG004684: SpoVR-like protein — —
Marinobacter adhaerens HP15 0.43 HP15_3390 thioesterase superfamily protein 0.69 HP15_2935 SpoVR family protein low > 73
Magnetospirillum magneticum AMB-1 0.43 AMB_RS16945 acyl-CoA thioesterase 0.50 AMB_RS10895 SpoVR family protein low > 64
Pseudomonas sp. S08-1 0.43 OH686_13400 cytosolic long-chain acyl-CoA thioester hydrolase family protein 0.69 OH686_15010 SpoVR-like protein low > 80
Pseudomonas stutzeri RCH2 0.43 Psest_0218 Acyl-CoA hydrolase 0.69 Psest_3674 Uncharacterized conserved protein low > 67
Acidovorax sp. GW101-3H11 0.43 Ac3H11_1945 Acyl-CoA hydrolase (EC 3.1.2.20) 0.63 Ac3H11_1147 FIG004684: SpoVR-like protein low > 79
Sinorhizobium meliloti 1021 0.42 SMc04228 hypothetical protein 0.51 SMc01265 SpoVR family protein low > 103
Cupriavidus basilensis FW507-4G11 0.42 RR42_RS02530 acyl-CoA hydrolase 0.65 RR42_RS36475 SpoVR family protein 0.27 63
Variovorax sp. SCN45 0.42 GFF4599 Acyl-CoA hydrolase (EC 3.1.2.20) 0.66 GFF2935 FIG004684: SpoVR-like protein low > 127
Castellaniella sp019104865 MT123 0.41 ABCV34_RS09595 acyl-CoA thioesterase 0.14 ABCV34_RS05550 SpoVR family protein low > 48
Paraburkholderia graminis OAS925 0.41 ABIE53_000793 acyl-CoA thioesterase YciA 0.66 ABIE53_002316 stage V sporulation protein R 0.26 50
Paraburkholderia bryophila 376MFSha3.1 0.41 H281DRAFT_04633 (3S)-malyl-CoA thioesterase 0.66 H281DRAFT_05234 Stage V sporulation protein SpoVR/YcgB, involved in spore cortex formation low > 103
Ralstonia sp. UNC404CL21Col 0.41 ABZR87_RS07500 acyl-CoA thioesterase 0.64 ABZR87_RS14210 SpoVR family protein low > 80
Rhizobium sp. OAE497 0.40 ABIE40_RS10785 acyl-CoA thioesterase 0.47 ABIE40_RS12540 SpoVR family protein low > 107
Paraburkholderia sabiae LMG 24235 0.40 QEN71_RS02095 acyl-CoA thioesterase 0.66 QEN71_RS07385 SpoVR family protein low > 153
Burkholderia phytofirmans PsJN 0.39 BPHYT_RS03270 acyl-CoA hydrolase 0.66 BPHYT_RS11180 SpoVR family protein low > 109
Herbaspirillum seropedicae SmR1 0.38 HSERO_RS19275 acyl-CoA hydrolase 0.68 HSERO_RS21700 SpoVR family protein low > 78

Not shown: 16 genomes with orthologs for HER17_RS10965 only; 8 genomes with orthologs for HER17_RS11210 only