Conservation of cofitness between HER17_RS07710 and HER17_RS09305 in Pectobacterium carotovorum WPP14

56 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS07710 UvrY/SirA/GacA family response regulator transcription factor 1.0 HER17_RS09305 glutathione transferase GstA 0.69 14
Dickeya dianthicola ME23 0.92 DZA65_RS14290 UvrY/SirA/GacA family response regulator transcription factor 0.63 DZA65_RS13070 glutathione transferase GstA low > 75
Dickeya dianthicola 67-19 0.91 HGI48_RS13800 UvrY/SirA/GacA family response regulator transcription factor 0.63 HGI48_RS12615 glutathione transferase GstA 0.75 31
Dickeya dadantii 3937 0.91 DDA3937_RS13705 UvrY/SirA/GacA family response regulator transcription factor 0.62 DDA3937_RS12560 glutathione transferase GstA low > 74
Serratia liquefaciens MT49 0.88 IAI46_09205 UvrY/SirA/GacA family response regulator transcription factor 0.58 IAI46_11385 glutathione transferase GstA low > 86
Rahnella sp. WP5 0.87 EX31_RS24145 UvrY/SirA/GacA family response regulator transcription factor 0.55 EX31_RS13740 glutathione transferase GstA low > 89
Pantoea sp. MT58 0.86 IAI47_12470 UvrY/SirA/GacA family response regulator transcription factor 0.55 IAI47_10505 glutathione transferase GstA low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.84 GFF1699 BarA-associated response regulator UvrY (= GacA = SirA) 0.50 GFF3639 Glutathione S-transferase (EC 2.5.1.18) low > 78
Escherichia coli BW25113 0.84 b1914 uvrY response regulator (NCBI) 0.49 b1635 gst glutathionine S-transferase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.84 OHPLBJKB_01815 Response regulator UvrY 0.49 OHPLBJKB_02090 Glutathione S-transferase GstA low > 73
Escherichia coli Nissle 1917 0.84 ECOLIN_RS10900 UvrY/SirA/GacA family response regulator transcription factor 0.50 ECOLIN_RS09125 glutathione transferase GstA — —
Escherichia fergusonii Becca 0.84 EFB2_02032 Response regulator UvrY 0.50 EFB2_02357 Glutathione S-transferase GstA low > 86
Escherichia coli ECRC102 0.84 NIAGMN_02230 uvrC excinuclease ABC subunit UvrC 0.49 NIAGMN_00555 gstA glutathione transferase GstA — —
Escherichia coli ECOR38 0.84 HEPCGN_04175 uvrC excinuclease ABC subunit UvrC 0.50 HEPCGN_05895 gstA glutathione transferase GstA low > 87
Escherichia coli ECOR27 0.84 NOLOHH_16440 uvrY UvrY/SirA/GacA family response regulator transcription factor 0.50 NOLOHH_18030 gstA glutathione transferase GstA — —
Escherichia coli ECRC101 0.84 MCAODC_19570 uvrC excinuclease ABC subunit UvrC 0.49 MCAODC_17900 gstA glutathione transferase GstA low > 87
Escherichia coli ECRC100 0.84 OKFHMN_25820 uvrC excinuclease ABC subunit UvrC 0.49 OKFHMN_27510 gstA glutathione transferase GstA — —
Escherichia coli ECRC98 0.84 JDDGAC_00410 uvrC excinuclease ABC subunit UvrC 0.49 JDDGAC_02100 gstA glutathione transferase GstA low > 86
Escherichia coli ECRC99 0.84 KEDOAH_02270 uvrC excinuclease ABC subunit UvrC 0.49 KEDOAH_00595 gstA glutathione transferase GstA — —
Escherichia coli ECRC62 0.84 BNILDI_15230 uvrY UvrY/SirA/GacA family response regulator transcription factor 0.49 BNILDI_16820 gstA glutathione transferase GstA low > 75
Enterobacter asburiae PDN3 0.83 EX28DRAFT_0633 two component transcriptional regulator, LuxR family 0.50 EX28DRAFT_1631 Glutathione S-transferase 0.65 33
Enterobacter sp. TBS_079 0.83 MPMX20_02839 Response regulator UvrY 0.46 MPMX20_02003 Glutathione S-transferase GstA low > 85
Erwinia tracheiphila SCR3 0.83 LU632_RS10190 uvrY UvrY/SirA/GacA family response regulator transcription factor 0.53 LU632_RS11280 gstA glutathione transferase GstA — —
Klebsiella michiganensis M5al 0.82 BWI76_RS18335 DNA-binding response regulator 0.50 BWI76_RS16395 glutathione S-transferase low > 92
Pseudomonas fluorescens SBW25-INTG 0.55 PFLU_RS10765 UvrY/SirA/GacA family response regulator transcription factor 0.38 PFLU_RS23645 glutathione transferase GstA low > 109
Pseudomonas simiae WCS417 0.55 PS417_10720 chemotaxis protein CheY 0.37 PS417_22030 glutathione S-transferase low > 88
Pseudomonas fluorescens SBW25 0.55 PFLU_RS10765 UvrY/SirA/GacA family response regulator transcription factor 0.38 PFLU_RS23645 glutathione transferase GstA low > 109
Pseudomonas sp. S08-1 0.53 OH686_00335 BarA-associated response regulator UvrY ( GacA SirA) 0.28 OH686_16945 Glutathione S-transferase low > 80
Pseudomonas fluorescens FW300-N2E3 0.51 AO353_21830 chemotaxis protein CheY 0.40 AO353_03280 glutathione S-transferase low > 101
Pseudomonas fluorescens FW300-N2E2 0.50 Pf6N2E2_2022 BarA-associated response regulator UvrY (= GacA = SirA) 0.38 Pf6N2E2_1561 Glutathione S-transferase (EC 2.5.1.18) low > 103
Pseudomonas fluorescens FW300-N1B4 0.50 Pf1N1B4_5619 BarA-associated response regulator UvrY (= GacA = SirA) 0.41 Pf1N1B4_561 Glutathione S-transferase (EC 2.5.1.18) low > 87
Acinetobacter radioresistens SK82 0.46 MPMX26_00164 Response regulator GacA 0.37 MPMX26_01106 Glutathione S-transferase GST-6.0 low > 36
Dyella japonica UNC79MFTsu3.2 0.40 ABZR86_RS02715 response regulator 0.49 ABZR86_RS05865 glutathione transferase GstA low > 74
Rhodanobacter denitrificans MT42 0.39 LRK55_RS17740 response regulator 0.47 LRK55_RS00670 glutathione transferase GstA low > 63
Ralstonia solanacearum GMI1000 0.38 RS_RS01435 DNA-binding response regulator 0.45 RS_RS04100 glutathione transferase GstA low > 80
Xanthomonas campestris pv. campestris strain 8004 0.38 Xcc-8004.2612.1 BarA-associated response regulator UvrY (= GacA = SirA) 0.25 Xcc-8004.4103.1 Glutathione S-transferase (EC 2.5.1.18) low > 74
Ralstonia solanacearum UW163 0.38 UW163_RS02980 DNA-binding response regulator 0.45 UW163_RS00260 glutathione transferase GstA — —
Rhodanobacter sp. FW510-T8 0.38 OKGIIK_07415 DNA-binding response regulator 0.46 OKGIIK_05995 gstA glutathione transferase GstA low > 52
Ralstonia solanacearum PSI07 0.38 RPSI07_RS22720 DNA-binding response regulator 0.46 RPSI07_RS19910 glutathione transferase GstA low > 81
Ralstonia solanacearum IBSBF1503 0.38 RALBFv3_RS10600 DNA-binding response regulator 0.45 RALBFv3_RS13310 glutathione transferase GstA low > 76
Ralstonia sp. UNC404CL21Col 0.38 ABZR87_RS06400 response regulator transcription factor 0.38 ABZR87_RS04030 glutathione transferase GstA low > 80
Lysobacter sp. OAE881 0.37 ABIE51_RS11810 response regulator 0.25 ABIE51_RS06035 glutathione S-transferase N-terminal domain-containing protein low > 62
Variovorax sp. SCN45 0.37 GFF2564 Two-component transcriptional response regulator, LuxR family 0.43 GFF3331 Glutathione S-transferase (EC 2.5.1.18) low > 127
Variovorax sp. OAS795 0.37 ABID97_RS07360 response regulator transcription factor 0.43 ABID97_RS02885 glutathione transferase GstA low > 91
Hydrogenophaga sp. GW460-11-11-14-LB1 0.36 GFF2789 DNA-binding response regulator, LuxR family 0.42 GFF2048 Glutathione S-transferase (EC 2.5.1.18) low > 90
Acidovorax sp. GW101-3H11 0.36 Ac3H11_3852 DNA-binding response regulator, LuxR family 0.43 Ac3H11_4971 Glutathione S-transferase (EC 2.5.1.18) — —
Cupriavidus basilensis FW507-4G11 0.36 RR42_RS00785 LuxR family transcriptional regulator 0.36 RR42_RS00340 glutathione S-transferase low > 128
Herbaspirillum seropedicae SmR1 0.36 HSERO_RS13890 LuxR family transcriptional regulator 0.32 HSERO_RS07745 glutathione S-transferase low > 78
Burkholderia phytofirmans PsJN 0.35 BPHYT_RS13150 hisitidine kinase 0.42 BPHYT_RS07725 glutathione S-transferase — —
Rhodanobacter denitrificans FW104-10B01 0.34 LRK54_RS17520 response regulator 0.48 LRK54_RS00895 glutathione transferase GstA low > 59
Paraburkholderia sabiae LMG 24235 0.34 QEN71_RS05525 response regulator transcription factor 0.31 QEN71_RS14980 glutathione binding-like protein low > 153
Magnetospirillum magneticum AMB-1 0.29 AMB_RS06830 DNA-binding response regulator 0.38 AMB_RS21805 glutathione transferase GstA low > 64
Rhodopseudomonas palustris CGA009 0.27 TX73_007655 response regulator transcription factor 0.45 TX73_004230 glutathione transferase GstA low > 86
Azospirillum sp. SherDot2 0.26 MPMX19_03688 Response regulator UvrY 0.39 MPMX19_02098 Glutathione S-transferase GST-6.0 low > 112
Rhizobium sp. OAE497 0.26 ABIE40_RS23610 response regulator transcription factor 0.21 ABIE40_RS04595 glutathione S-transferase N-terminal domain-containing protein low > 107
Azospirillum brasilense Sp245 0.26 AZOBR_RS27860 regulator 0.20 AZOBR_RS03640 glutathione S-transferase low > 97
Sinorhizobium meliloti 1021 0.25 SM_b21520 two-component response regulator protein 0.21 SMc00036 glutathione S-transferase low > 103

Not shown: 24 genomes with orthologs for HER17_RS07710 only; 11 genomes with orthologs for HER17_RS09305 only