Conservation of cofitness between HER17_RS04160 and HER17_RS05755 in Pectobacterium carotovorum WPP14

43 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS04160 coniferyl aldehyde dehydrogenase 1.0 HER17_RS05755 uracil-DNA glycosylase 0.56 16
Dickeya dadantii 3937 0.72 DDA3937_RS14550 coniferyl aldehyde dehydrogenase 0.87 DDA3937_RS15790 uracil-DNA glycosylase low > 74
Dickeya dianthicola ME23 0.71 DZA65_RS15435 coniferyl aldehyde dehydrogenase 0.87 DZA65_RS16955 uracil-DNA glycosylase 0.41 6
Dickeya dianthicola 67-19 0.69 HGI48_RS14500 coniferyl aldehyde dehydrogenase 0.87 HGI48_RS15875 uracil-DNA glycosylase low > 71
Pseudomonas sp. RS175 0.54 PFR28_01983 Coniferyl aldehyde dehydrogenase 0.59 PFR28_00677 Uracil-DNA glycosylase low > 88
Sphingomonas koreensis DSMZ 15582 0.44 Ga0059261_1486 NAD-dependent aldehyde dehydrogenases 0.53 Ga0059261_2524 Uracil-DNA glycosylase (EC 3.2.2.-) low > 68
Ralstonia sp. UNC404CL21Col 0.43 ABZR87_RS04755 coniferyl aldehyde dehydrogenase 0.43 ABZR87_RS02170 uracil-DNA glycosylase — —
Acidovorax sp. GW101-3H11 0.42 Ac3H11_1472 Aldehyde dehydrogenase (EC 1.2.1.3); Probable coniferyl aldehyde dehydrogenase (EC 1.2.1.68) 0.37 Ac3H11_773 Uracil-DNA glycosylase, family 1 low > 79
Variovorax sp. SCN45 0.40 GFF5850 Aldehyde dehydrogenase (EC 1.2.1.3); Probable coniferyl aldehyde dehydrogenase (EC 1.2.1.68) 0.36 GFF5889 Uracil-DNA glycosylase, family 1 (EC 3.2.2.27) low > 127
Pseudomonas simiae WCS417 0.40 PS417_26845 coniferyl aldehyde dehydrogenase 0.57 PS417_07035 uracil-DNA glycosylase low > 88
Shewanella loihica PV-4 0.40 Shew_3103 aldehyde dehydrogenase (RefSeq) 0.61 Shew_3073 uracil-DNA glycosylase (RefSeq) low > 60
Shewanella amazonensis SB2B 0.40 Sama_2855 coniferyl aldehyde dehydrogenase (RefSeq) 0.61 Sama_1229 putative uracil-DNA glycosylase (RefSeq) low > 62
Shewanella oneidensis MR-1 0.39 SO3683 coniferyl aldehyde dehydrogenase (NCBI ptt file) 0.62 SO3654 ung uracil-DNA glycosylase (NCBI ptt file) low > 76
Pseudomonas fluorescens SBW25 0.39 PFLU_RS28490 coniferyl aldehyde dehydrogenase 0.57 PFLU_RS07110 uracil-DNA glycosylase low > 109
Pseudomonas fluorescens SBW25-INTG 0.39 PFLU_RS28490 coniferyl aldehyde dehydrogenase 0.57 PFLU_RS07110 uracil-DNA glycosylase low > 109
Pseudomonas stutzeri RCH2 0.39 Psest_0247 NAD-dependent aldehyde dehydrogenases 0.59 Psest_3107 uracil-DNA glycosylase low > 67
Pseudomonas fluorescens FW300-N2E3 0.39 AO353_08290 coniferyl aldehyde dehydrogenase 0.59 AO353_17560 uracil-DNA glycosylase low > 101
Pseudomonas sp. S08-1 0.39 OH686_14170 Aldehyde dehydrogenase / Probable coniferyl aldehyde dehydrogenase 0.58 OH686_05820 uracil-DNA glycosylase low > 80
Pseudomonas syringae pv. syringae B728a ΔmexB 0.39 Psyr_2579 Aldehyde dehydrogenase 0.57 Psyr_3970 Uracil-DNA glycosylase low > 86
Pseudomonas syringae pv. syringae B728a 0.39 Psyr_2579 Aldehyde dehydrogenase 0.57 Psyr_3970 Uracil-DNA glycosylase low > 86
Pseudomonas fluorescens GW456-L13 0.39 PfGW456L13_985 Aldehyde dehydrogenase (EC 1.2.1.3); Probable coniferyl aldehyde dehydrogenase (EC 1.2.1.68) 0.58 PfGW456L13_4530 Uracil-DNA glycosylase, family 1 low > 87
Cupriavidus basilensis FW507-4G11 0.39 RR42_RS01275 aldehyde dehydrogenase 0.46 RR42_RS18320 uracil-DNA glycosylase — —
Pseudomonas fluorescens FW300-N1B4 0.39 Pf1N1B4_2315 Aldehyde dehydrogenase (EC 1.2.1.3); Probable coniferyl aldehyde dehydrogenase (EC 1.2.1.68) 0.59 Pf1N1B4_3309 Uracil-DNA glycosylase, family 1 low > 87
Hydrogenophaga sp. GW460-11-11-14-LB1 0.39 GFF3943 Aldehyde dehydrogenase (EC 1.2.1.3); Probable coniferyl aldehyde dehydrogenase (EC 1.2.1.68) 0.43 GFF3112 Uracil-DNA glycosylase, family 1 — —
Shewanella sp. ANA-3 0.38 Shewana3_3251 aldehyde dehydrogenase (RefSeq) 0.62 Shewana3_3221 uracil-DNA glycosylase (RefSeq) low > 73
Pseudomonas fluorescens FW300-N2E2 0.38 Pf6N2E2_4575 Coniferyl aldehyde dehydrogenase (EC 1.2.1.68) 0.59 Pf6N2E2_2772 Uracil-DNA glycosylase, family 1 low > 103
Pseudomonas fluorescens FW300-N2C3 0.38 AO356_13300 coniferyl aldehyde dehydrogenase 0.59 AO356_04635 uracil-DNA glycosylase low > 104
Marinobacter adhaerens HP15 0.38 HP15_3329 NAD-dependent aldehyde dehydrogenase 0.57 HP15_769 uracil-DNA glycosylase low > 73
Dyella japonica UNC79MFTsu3.2 0.38 ABZR86_RS12980 coniferyl aldehyde dehydrogenase 0.56 ABZR86_RS12580 uracil-DNA glycosylase low > 74
Kangiella aquimarina DSM 16071 0.37 B158DRAFT_0768 NAD-dependent aldehyde dehydrogenases 0.57 B158DRAFT_1441 Uracil-DNA glycosylase (EC 3.2.2.-) low > 40
Acinetobacter radioresistens SK82 0.36 MPMX26_00376 Coniferyl aldehyde dehydrogenase 0.52 MPMX26_01231 Uracil-DNA glycosylase 0.58 36
Rhodanobacter sp. FW510-T8 0.36 OKGIIK_16495 Aldehyde dehydrogenase 0.54 OKGIIK_12930 ung uracil-DNA glycosylase low > 52
Pseudomonas putida KT2440 0.36 PP_5120 coniferyl aldehyde dehydrogenase 0.58 PP_1413 Uracil-DNA glycosylase low > 96
Vibrio cholerae E7946 ATCC 55056 0.35 CSW01_19420 coniferyl aldehyde dehydrogenase 0.78 CSW01_11950 uracil-DNA glycosylase low > 62
Rhodanobacter denitrificans FW104-10B01 0.35 LRK54_RS07140 coniferyl aldehyde dehydrogenase 0.55 LRK54_RS10940 uracil-DNA glycosylase low > 59
Rhodanobacter denitrificans MT42 0.35 LRK55_RS06880 coniferyl aldehyde dehydrogenase 0.55 LRK55_RS10645 uracil-DNA glycosylase low > 63
Variovorax sp. OAS795 0.34 ABID97_RS26110 coniferyl aldehyde dehydrogenase 0.36 ABID97_RS05285 uracil-DNA glycosylase low > 91
Lysobacter sp. OAE881 0.34 ABIE51_RS01765 coniferyl aldehyde dehydrogenase 0.53 ABIE51_RS02100 uracil-DNA glycosylase low > 62
Pedobacter sp. GW460-11-11-14-LB5 0.33 CA265_RS21385 aldehyde dehydrogenase family protein 0.56 CA265_RS10890 uracil-DNA glycosylase low > 88
Echinicola vietnamensis KMM 6221, DSM 17526 0.31 Echvi_1497 NAD-dependent aldehyde dehydrogenases 0.55 Echvi_2393 uracil-DNA glycosylase low > 79
Alteromonas macleodii MIT1002 0.30 MIT1002_00534 Aldehyde dehydrogenase 0.65 MIT1002_03083 Uracil-DNA glycosylase low > 70
Pontibacter actiniarum KMM 6156, DSM 19842 0.29 CA264_09240 aldehyde dehydrogenase 0.52 CA264_04730 uracil-DNA glycosylase low > 74
Bifidobacterium breve UCC2003 0.27 BBR_RS13365 aldehyde dehydrogenase family protein 0.35 BBR_RS17485 uracil-DNA glycosylase low > 34
Mycobacterium tuberculosis H37Rv 0.27 Rv0147 Probable aldehyde dehydrogenase (NAD+) dependent 0.33 Rv2976c Probable uracil-DNA glycosylase Ung (UDG) low > 58

Not shown: 10 genomes with orthologs for HER17_RS04160 only; 37 genomes with orthologs for HER17_RS05755 only