Conservation of cofitness between HER17_RS06930 and HER17_RS05675 in Pectobacterium carotovorum WPP14

43 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS06930 50S ribosomal protein L3 N(5)-glutamine methyltransferase 1.0 HER17_RS05675 sulfate ABC transporter permease subunit CysT 0.89 13
Dickeya dadantii 3937 0.90 DDA3937_RS14585 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.93 DDA3937_RS15845 sulfate ABC transporter permease subunit CysT low > 74
Dickeya dianthicola 67-19 0.90 HGI48_RS14535 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.92 HGI48_RS15985 sulfate ABC transporter permease subunit CysT low > 71
Dickeya dianthicola ME23 0.90 DZA65_RS15470 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.92 DZA65_RS17070 sulfate ABC transporter permease subunit CysT low > 75
Shewanella oneidensis MR-1 0.60 SO3080 hemK family protein (NCBI ptt file) 0.57 SO4653 cysT-2 sulfate ABC transporter, permease protein (NCBI ptt file) low > 76
Pseudomonas sp. S08-1 0.56 OH686_00665 protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 0.76 OH686_11675 sulfate ABC transporter, permease protein CysT low > 80
Pseudomonas stutzeri RCH2 0.55 Psest_1995 protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 0.66 Psest_4061 sulfate ABC transporter, permease protein CysT low > 67
Pseudomonas fluorescens FW300-N2E2 0.54 Pf6N2E2_5819 Protein-N(5)-glutamine methyltransferase PrmB, methylates LSU ribosomal protein L3p 0.66 Pf6N2E2_4004 Sulfate transport system permease protein CysT low > 103
Pseudomonas fluorescens FW300-N2C3 0.54 AO356_19525 protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 0.75 AO356_10680 sulfate ABC transporter permease low > 104
Pseudomonas sp. RS175 0.54 PFR28_03129 50S ribosomal protein L3 glutamine methyltransferase 0.75 PFR28_04763 Sulfate transport system permease protein CysT low > 88
Pseudomonas fluorescens FW300-N2E3 0.53 AO353_02265 protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 0.74 AO353_11545 sulfate ABC transporter permease low > 101
Pseudomonas fluorescens FW300-N1B4 0.53 Pf1N1B4_3777 Protein-N(5)-glutamine methyltransferase PrmB, methylates LSU ribosomal protein L3p 0.75 Pf1N1B4_1726 Sulfate transport system permease protein CysT low > 87
Pseudomonas fluorescens SBW25-INTG 0.53 PFLU_RS21295 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.74 PFLU_RS00950 sulfate ABC transporter permease subunit CysT low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.53 Psyr_1850 [LSU ribosomal protein L3P]-glutamine N5-methyltransferase 0.78 Psyr_0083 Binding-protein-dependent transport systems inner membrane component low > 86
Pseudomonas fluorescens SBW25 0.53 PFLU_RS21295 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.74 PFLU_RS00950 sulfate ABC transporter permease subunit CysT low > 109
Pseudomonas syringae pv. syringae B728a 0.53 Psyr_1850 [LSU ribosomal protein L3P]-glutamine N5-methyltransferase 0.78 Psyr_0083 Binding-protein-dependent transport systems inner membrane component low > 86
Pseudomonas fluorescens GW456-L13 0.53 PfGW456L13_4168 Protein-N(5)-glutamine methyltransferase PrmB, methylates LSU ribosomal protein L3p 0.71 PfGW456L13_485 Sulfate transport system permease protein CysT low > 87
Pseudomonas simiae WCS417 0.53 PS417_19330 SAM-dependent methyltransferase 0.75 PS417_00935 sulfate ABC transporter permease
Pseudomonas putida KT2440 0.53 PP_1827 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 0.78 PP_5170 sulfate ABC transporter, inner membrane subunit CysT low > 96
Acinetobacter radioresistens SK82 0.46 MPMX26_01339 50S ribosomal protein L3 glutamine methyltransferase 0.61 MPMX26_02168 Sulfate transport system permease protein CysT low > 36
Xanthomonas campestris pv. campestris strain 8004 0.45 Xcc-8004.1953.1 Protein-N(5)-glutamine methyltransferase PrmB, methylates LSU ribosomal protein L3p 0.55 Xcc-8004.4086.1 Sulfate transport system permease protein CysT low > 74
Dyella japonica UNC79MFTsu3.2 0.45 ABZR86_RS08050 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.46 ABZR86_RS02885 sulfate ABC transporter permease subunit CysT low > 74
Castellaniella sp019104865 MT123 0.45 ABCV34_RS05175 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.59 ABCV34_RS03940 sulfate ABC transporter permease subunit CysT low > 48
Azospirillum brasilense Sp245 0.44 AZOBR_RS10950 SAM-dependent methyltransferase 0.53 AZOBR_RS19270 sulfate transporter low > 97
Rhodanobacter sp. FW510-T8 0.44 OKGIIK_04795 prmB 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.53 OKGIIK_10930 cysT sulfate ABC transporter permease subunit CysT low > 52
Azospirillum sp. SherDot2 0.43 MPMX19_00751 50S ribosomal protein L3 glutamine methyltransferase 0.60 MPMX19_04167 Sulfate transport system permease protein CysT low > 112
Dechlorosoma suillum PS 0.43 Dsui_2712 protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 0.59 Dsui_0260 sulfate ABC transporter, permease protein CysT 0.38 49
Paraburkholderia sabiae LMG 24235 0.43 QEN71_RS06350 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.55 QEN71_RS22585 sulfate ABC transporter permease subunit CysT low > 153
Herbaspirillum seropedicae SmR1 0.43 HSERO_RS10785 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 0.53 HSERO_RS08230 sulfate/thiosulfate transporter subunit low > 78
Paraburkholderia graminis OAS925 0.42 ABIE53_002520 ribosomal protein L3 glutamine methyltransferase 0.55 ABIE53_001991 sulfate transport system permease protein low > 113
Lysobacter sp. OAE881 0.42 ABIE51_RS08215 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.46 ABIE51_RS01850 sulfate ABC transporter permease subunit CysT low > 62
Ralstonia solanacearum IBSBF1503 0.42 RALBFv3_RS00290 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.51 RALBFv3_RS00085 sulfate ABC transporter permease subunit CysT low > 76
Ralstonia solanacearum UW163 0.42 UW163_RS13620 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.51 UW163_RS13415 sulfate ABC transporter permease subunit CysT
Ralstonia solanacearum GMI1000 0.41 RS_RS06960 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.49 RS_RS06745 sulfate ABC transporter permease subunit CysT low > 80
Ralstonia solanacearum PSI07 0.41 RPSI07_RS17185 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.50 RPSI07_RS17400 sulfate ABC transporter permease subunit CysT low > 81
Ralstonia sp. UNC404CL21Col 0.41 ABZR87_RS11740 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.51 ABZR87_RS11540 sulfate ABC transporter permease subunit CysT low > 80
Rhodopseudomonas palustris CGA009 0.40 TX73_005990 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.55 TX73_003870 sulfate ABC transporter permease subunit CysT low > 86
Burkholderia phytofirmans PsJN 0.39 BPHYT_RS12205 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 0.55 BPHYT_RS08795 sulfate/thiosulfate transporter subunit low > 109
Paraburkholderia bryophila 376MFSha3.1 0.39 H281DRAFT_00596 [LSU ribosomal protein L3P]-glutamine N5-methyltransferase 0.55 H281DRAFT_00779 sulfate transport system permease protein low > 103
Cupriavidus basilensis FW507-4G11 0.38 RR42_RS11955 SAM-dependent methyltransferase 0.52 RR42_RS12260 sulfate transporter low > 128
Variovorax sp. SCN45 0.36 GFF258 Ribosomal protein L3 N(5)-glutamine methyltransferase (EC 2.1.1.298) 0.57 GFF1288 Sulfate transport system permease protein CysT low > 127
Variovorax sp. OAS795 0.35 ABID97_RS16650 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.56 ABID97_RS15575 sulfate ABC transporter permease subunit CysT low > 91
Acidovorax sp. GW101-3H11 0.34 Ac3H11_2299 Protein-N(5)-glutamine methyltransferase PrmB, methylates LSU ribosomal protein L3p 0.58 Ac3H11_911 Sulfate transport system permease protein CysT low > 79
Hydrogenophaga sp. GW460-11-11-14-LB1 0.32 GFF4549 Protein-N(5)-glutamine methyltransferase PrmB, methylates LSU ribosomal protein L3p 0.55 GFF5097 Sulfate transport system permease protein CysT low > 90

Not shown: 30 genomes with orthologs for HER17_RS06930 only; 10 genomes with orthologs for HER17_RS05675 only