Conservation of cofitness between HER17_RS02775 and HER17_RS01720 in Pectobacterium carotovorum WPP14

57 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS02775 protein CreA 1.0 HER17_RS01720 ribosome-associated heat shock protein Hsp15 0.61 13
Klebsiella michiganensis M5al 0.82 BWI76_RS04210 hypothetical protein 0.74 BWI76_RS26145 heat-shock protein Hsp15 low > 92
Rahnella sp. WP5 0.80 EX31_RS03960 protein CreA 0.76 EX31_RS04770 ribosome-associated heat shock protein Hsp15 low > 89
Dickeya dadantii 3937 0.79 DDA3937_RS18430 protein CreA 0.79 DDA3937_RS19600 ribosome-associated heat shock protein Hsp15 low > 74
Serratia liquefaciens MT49 0.78 IAI46_03010 protein CreA 0.81 IAI46_23760 ribosome-associated heat shock protein Hsp15 low > 86
Dickeya dianthicola 67-19 0.78 HGI48_RS18360 protein CreA 0.77 HGI48_RS19730 ribosome-associated heat shock protein Hsp15 low > 71
Pantoea sp. MT58 0.78 IAI47_16235 protein CreA 0.76 IAI47_01840 ribosome-associated heat shock protein Hsp15 low > 76
Dickeya dianthicola ME23 0.78 DZA65_RS19500 protein CreA 0.77 DZA65_RS20815 ribosome-associated heat shock protein Hsp15 low > 75
Enterobacter sp. TBS_079 0.77 MPMX20_00704 hypothetical protein 0.76 MPMX20_04288 Heat shock protein 15 low > 85
Enterobacter asburiae PDN3 0.77 EX28DRAFT_3607 Uncharacterized protein conserved in bacteria 0.75 EX28DRAFT_4142 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.76 GFF1065 Conserved uncharacterized protein CreA 0.77 GFF619 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) low > 78
Escherichia coli HS(pFamp)R (ATCC 700891) 0.75 OHPLBJKB_03664 hypothetical protein 0.74 OHPLBJKB_00303 Heat shock protein 15 low > 73
Escherichia coli ECRC100 0.75 OKFHMN_11145 creA protein CreA 0.74 OKFHMN_17060 hslR ribosome-associated heat shock protein Hsp15 low > 80
Escherichia coli Nissle 1917 0.75 ECOLIN_RS25235 protein CreA 0.74 ECOLIN_RS19415 ribosome-associated heat shock protein Hsp15 low > 55
Escherichia coli ECOR38 0.75 HEPCGN_09150 creA protein CreA 0.74 HEPCGN_15880 hslR ribosome-associated heat shock protein Hsp15 low > 87
Escherichia coli ECRC98 0.75 JDDGAC_14740 creA protein CreA 0.74 JDDGAC_20690 hslR ribosome-associated heat shock protein Hsp15 low > 86
Escherichia coli ECRC62 0.75 BNILDI_08125 creA protein CreA 0.74 BNILDI_02670 hslR ribosome-associated heat shock protein Hsp15 low > 75
Escherichia coli ECRC102 0.75 NIAGMN_08995 creA protein CreA 0.74 NIAGMN_14830 hslR ribosome-associated heat shock protein Hsp15 — —
Escherichia coli ECRC99 0.75 KEDOAH_17010 creA protein CreA 0.74 KEDOAH_11080 hslR ribosome-associated heat shock protein Hsp15 — —
Escherichia coli ECOR27 0.75 NOLOHH_03475 creA protein CreA 0.74 NOLOHH_08850 hslR ribosome-associated heat shock protein Hsp15 low > 75
Escherichia coli BL21 0.75 ECD_04273 putative periplasmic protein 0.73 ECD_03252 ribosome-associated heat shock protein Hsp15 low > 61
Escherichia fergusonii Becca 0.75 EFB2_04047 hypothetical protein 0.74 EFB2_00428 Heat shock protein 15 low > 86
Escherichia coli ECRC101 0.75 MCAODC_01660 creA protein CreA 0.74 MCAODC_07590 hslR ribosome-associated heat shock protein Hsp15 low > 87
Escherichia coli BW25113 0.75 b4397 creA hypothetical protein (NCBI) 0.74 b3400 hslR ribosome-associated heat shock protein Hsp15 (NCBI) low > 76
Pseudomonas stutzeri RCH2 0.63 Psest_3383 Uncharacterized protein conserved in bacteria 0.47 Psest_3991 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) low > 67
Pseudomonas sp. S08-1 0.62 OH686_16310 Conserved uncharacterized protein CreA 0.47 OH686_11070 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit low > 80
Pseudomonas fluorescens FW300-N2C3 0.62 AO356_15820 hypothetical protein 0.46 AO356_10150 RNA-binding protein low > 104
Pseudomonas syringae pv. syringae B728a 0.61 Psyr_0705 CreA 0.44 Psyr_0170 heat shock protein Hsp15 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.61 Psyr_0705 CreA 0.44 Psyr_0170 heat shock protein Hsp15 low > 86
Pseudomonas fluorescens GW456-L13 0.61 PfGW456L13_1473 Conserved uncharacterized protein CreA 0.49 PfGW456L13_423 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) low > 87
Pseudomonas fluorescens FW300-N2E2 0.61 Pf6N2E2_5104 Conserved uncharacterized protein CreA 0.46 Pf6N2E2_3901 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) low > 103
Pseudomonas sp. RS175 0.60 PFR28_03768 hypothetical protein 0.42 PFR28_04872 Heat shock protein 15 low > 88
Pseudomonas fluorescens SBW25 0.60 PFLU_RS25355 CreA family protein 0.47 PFLU_RS01305 RNA-binding protein S4 low > 109
Pseudomonas fluorescens FW300-N1B4 0.60 Pf1N1B4_2801 Conserved uncharacterized protein CreA 0.46 Pf1N1B4_1776 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) — —
Pseudomonas fluorescens SBW25-INTG 0.60 PFLU_RS25355 CreA family protein 0.47 PFLU_RS01305 RNA-binding protein S4 low > 109
Pseudomonas putida KT2440 0.60 PP_0692 conserved protein of unknown function 0.45 PP_0250 heat shock protein Hsp15 involved in ribosome recycling low > 96
Pseudomonas fluorescens FW300-N2E3 0.60 AO353_14120 hypothetical protein 0.47 AO353_11765 RNA-binding protein low > 101
Pseudomonas simiae WCS417 0.59 PS417_23540 CreA 0.47 PS417_01195 RNA-binding protein S4 low > 88
Hydrogenophaga sp. GW460-11-11-14-LB1 0.58 GFF2638 Conserved uncharacterized protein CreA 0.37 GFF5132 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) low > 90
Variovorax sp. SCN45 0.54 GFF802 Conserved uncharacterized protein CreA 0.31 GFF528 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) low > 127
Variovorax sp. OAS795 0.54 ABID97_RS12385 CreA family protein 0.30 ABID97_RS17750 RNA-binding S4 domain-containing protein low > 91
Rhodospirillum rubrum S1H 0.53 Rru_A2083 CreA (NCBI) 0.24 Rru_A0075 RNA-binding S4 (NCBI) low > 58
Acidovorax sp. GW101-3H11 0.52 Ac3H11_4062 Conserved uncharacterized protein CreA 0.37 Ac3H11_56 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) low > 79
Herbaspirillum seropedicae SmR1 0.50 HSERO_RS12925 catabolite repression CreA protein 0.30 HSERO_RS01240 RNA-binding protein S4 low > 78
Paraburkholderia sabiae LMG 24235 0.50 QEN71_RS04425 CreA family protein 0.25 QEN71_RS26515 RNA-binding S4 domain-containing protein low > 153
Ralstonia sp. UNC404CL21Col 0.50 ABZR87_RS12270 CreA family protein 0.30 ABZR87_RS01005 RNA-binding S4 domain-containing protein low > 80
Cupriavidus basilensis FW507-4G11 0.49 RR42_RS28965 hypothetical protein 0.32 RR42_RS05930 RNA-binding protein S4 low > 128
Ralstonia solanacearum GMI1000 0.49 RS_RS07400 hypothetical protein 0.29 RS_RS13230 RNA-binding S4 domain-containing protein low > 80
Paraburkholderia bryophila 376MFSha3.1 0.48 H281DRAFT_04326 CreA protein 0.26 H281DRAFT_04696 heat shock protein Hsp15 low > 103
Burkholderia phytofirmans PsJN 0.48 BPHYT_RS14555 CreA family protein 0.25 BPHYT_RS03580 RNA-binding protein S4 low > 109
Ralstonia solanacearum UW163 0.47 UW163_RS14045 crea protein 0.29 UW163_RS08255 RNA-binding S4 domain-containing protein — —
Ralstonia solanacearum IBSBF1503 0.47 RALBFv3_RS00715 crea protein 0.29 RALBFv3_RS05370 RNA-binding S4 domain-containing protein low > 76
Ralstonia solanacearum PSI07 0.47 RPSI07_RS16785 hypothetical protein 0.29 RPSI07_RS11935 RNA-binding S4 domain-containing protein — —
Shewanella sp. ANA-3 0.28 Shewana3_2415 CreA family protein (RefSeq) 0.56 Shewana3_0149 RNA-binding S4 domain-containing protein (RefSeq) — —
Shewanella amazonensis SB2B 0.28 Sama_2009 creA protein (RefSeq) 0.57 Sama_0167 heat shock protein 15 (RefSeq) low > 62
Rhizobium sp. OAE497 0.27 ABIE40_RS11755 CreA family protein 0.20 ABIE40_RS18660 RNA-binding S4 domain-containing protein low > 107
Agrobacterium fabrum C58 0.27 Atu2076 hypothetical protein 0.17 Atu2752 hypothetical protein low > 89
Vibrio cholerae E7946 ATCC 55056 0.26 CSW01_18165 hypothetical protein 0.60 CSW01_13800 heat-shock protein Hsp15 low > 62

Not shown: 6 genomes with orthologs for HER17_RS02775 only; 25 genomes with orthologs for HER17_RS01720 only