| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pectobacterium carotovorum WPP14 | 1.0 | HER17_RS11620 | | NUDIX hydrolase | 1.0 | HER17_RS00515 | | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | 0.79 | 8 |
| Escherichia coli BL21 | 0.78 | ECD_01132 | | bifunctional thiamine pyrimidine pyrophosphate hydrolase and thiamine pyrophosphate hydrolase | 0.91 | ECD_03303 | | branched-chain amino acid ABC transporter ATPase | — | — |
| Escherichia coli ECRC98 | 0.78 | JDDGAC_06615 | nudJ | phosphatase NudJ | 0.91 | JDDGAC_20390 | livF | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | low | > 86 |
| Escherichia coli ECRC101 | 0.78 | MCAODC_22335 | nudJ | phosphatase NudJ | 0.91 | MCAODC_07290 | livF | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | low | > 87 |
| Escherichia coli ECRC62 | 0.78 | BNILDI_19060 | nudJ | phosphatase NudJ | 0.91 | BNILDI_02950 | livF | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | low | > 75 |
| Escherichia coli ECRC99 | 0.78 | KEDOAH_24835 | nudJ | phosphatase NudJ | 0.91 | KEDOAH_11380 | livF | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | — | — |
| Escherichia fergusonii Becca | 0.78 | EFB2_02841 | | Phosphatase NudJ | 0.91 | EFB2_00368 | | High-affinity branched-chain amino acid transport ATP-binding protein LivF | low | > 86 |
| Escherichia coli ECRC102 | 0.78 | NIAGMN_24895 | nudJ | phosphatase NudJ | 0.91 | NIAGMN_14530 | livF | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.78 | OHPLBJKB_02534 | | Phosphatase NudJ | 0.90 | OHPLBJKB_00249 | | High-affinity branched-chain amino acid transport ATP-binding protein LivF | low | > 73 |
| Escherichia coli BW25113 | 0.78 | b1134 | ymfB | bifunctional thiamin pyrimidine pyrophosphate hydrolase/ thiamin pyrophosphate hydrolase (NCBI) | 0.91 | b3454 | livF | ATP-binding component of leucine transport (VIMSS) | low | > 76 |
| Escherichia coli ECOR38 | 0.78 | HEPCGN_24225 | nudJ | phosphatase NudJ | 0.90 | HEPCGN_15580 | livF | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | low | > 87 |
| Escherichia coli ECOR27 | 0.78 | NOLOHH_20895 | nudJ | phosphatase NudJ | 0.91 | NOLOHH_08555 | livF | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | low | > 75 |
| Escherichia coli Nissle 1917 | 0.78 | ECOLIN_RS06630 | | phosphatase NudJ | 0.91 | ECOLIN_RS19755 | | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | — | — |
| Escherichia coli ECRC100 | 0.78 | OKFHMN_00750 | nudJ | phosphatase NudJ | 0.91 | OKFHMN_16760 | livF | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | low | > 80 |
| Dickeya dadantii 3937 | 0.77 | DDA3937_RS11480 | | NUDIX hydrolase | 0.94 | DDA3937_RS00680 | | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | low | > 74 |
| Serratia liquefaciens MT49 | 0.77 | IAI46_10445 | | NUDIX hydrolase | 0.84 | IAI46_00980 | | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | low | > 86 |
| Dickeya dianthicola 67-19 | 0.76 | HGI48_RS11525 | | NUDIX hydrolase | 0.94 | HGI48_RS20710 | | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | low | > 71 |
| Klebsiella michiganensis M5al | 0.75 | BWI76_RS11320 | | NUDIX hydrolase | 0.91 | BWI76_RS26330 | | ABC transporter ATP-binding protein | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.75 | GFF3419 | | Nudix-like NDP and NTP phosphohydrolase YmfB | 0.90 | GFF552 | | Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1) | low | > 78 |
| Erwinia tracheiphila SCR3 | 0.71 | LU632_RS14570 | | NUDIX hydrolase | 0.90 | LU632_RS19235 | livF | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | low | > 74 |
| Enterobacter sp. TBS_079 | 0.71 | MPMX20_01818 | | Phosphatase NudJ | 0.91 | MPMX20_04330 | | High-affinity branched-chain amino acid transport ATP-binding protein LivF | low | > 85 |
| Rahnella sp. WP5 | 0.71 | EX31_RS24580 | | NUDIX hydrolase | 0.90 | EX31_RS14785 | | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | low | > 89 |
| Enterobacter asburiae PDN3 | 0.71 | EX28DRAFT_1796 | | ADP-ribose pyrophosphatase | 0.90 | EX28DRAFT_4286 | | ABC-type branched-chain amino acid transport systems, ATPase component | low | > 76 |
| Pantoea sp. MT58 | 0.65 | IAI47_11910 | | NUDIX hydrolase | 0.89 | IAI47_01585 | | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | low | > 76 |
| Shewanella loihica PV-4 | 0.41 | Shew_1561 | | NUDIX hydrolase (RefSeq) | 0.42 | Shew_2606 | | ABC transporter-related protein (RefSeq) | low | > 60 |
| Dechlorosoma suillum PS | 0.33 | Dsui_3338 | | Zn-finger containing NTP pyrophosphohydrolase | 0.50 | Dsui_2057 | | ABC-type branched-chain amino acid transport systems, ATPase component | low | > 51 |
| Marinobacter adhaerens HP15 | 0.32 | HP15_2085 | | MutT/nudix family protein | 0.68 | HP15_3059 | | high-affinity branched-chain amino acid ABC transporter, ATP-binding protein | low | > 73 |
| Pseudomonas sp. S08-1 | 0.32 | OH686_00215 | | Nudix-like NDP and NTP phosphohydrolase NudJ | 0.67 | OH686_04625 | | Branched-chain amino acid ABC transporter, ATP-binding protein LivF | low | > 80 |
| Ralstonia sp. UNC404CL21Col | 0.30 | ABZR87_RS01335 | | NUDIX hydrolase | 0.47 | ABZR87_RS00295 | | ABC transporter ATP-binding protein | low | > 80 |
| Pseudomonas fluorescens GW456-L13 | 0.29 | PfGW456L13_2640 | | Nudix-like NDP and NTP phosphohydrolase YmfB | 0.66 | PfGW456L13_4611 | | Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1) | low | > 87 |
| Pseudomonas sp. RS175 | 0.29 | PFR28_02618 | | Phosphatase NudJ | 0.66 | PFR28_00536 | | High-affinity branched-chain amino acid transport ATP-binding protein LivF | low | > 88 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.29 | H281DRAFT_04652 | | ADP-ribose pyrophosphatase YjhB, NUDIX family | 0.47 | H281DRAFT_04059 | | amino acid/amide ABC transporter ATP-binding protein 2, HAAT family | low | > 103 |
| Ralstonia solanacearum IBSBF1503 | 0.29 | RALBFv3_RS05740 | | NUDIX hydrolase | 0.48 | RALBFv3_RS23185 | | ABC transporter ATP-binding protein | low | > 76 |
| Pseudomonas fluorescens FW300-N2E2 | 0.29 | Pf6N2E2_287 | | Nudix-like NDP and NTP phosphohydrolase YmfB | 0.66 | Pf6N2E2_2926 | | ABC transporter for L-leucine/L-isoleucine/L-phenylalanine/D-alanine, ATPase component 2 LivF (from data) | low | > 103 |
| Ralstonia solanacearum UW163 | 0.29 | UW163_RS07885 | | NUDIX hydrolase | 0.48 | UW163_RS16435 | | ABC transporter ATP-binding protein | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.28 | PFLU_RS18575 | | NUDIX hydrolase | 0.67 | PFLU_RS06625 | | ABC transporter ATP-binding protein | low | > 109 |
| Pseudomonas fluorescens FW300-N1B4 | 0.28 | Pf1N1B4_4049 | | Nudix-like NDP and NTP phosphohydrolase YmfB | 0.66 | Pf1N1B4_3214 | | Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1) | low | > 87 |
| Pseudomonas fluorescens SBW25 | 0.28 | PFLU_RS18575 | | NUDIX hydrolase | 0.67 | PFLU_RS06625 | | ABC transporter ATP-binding protein | low | > 109 |
| Pseudomonas fluorescens FW300-N2E3 | 0.28 | AO353_27700 | | NUDIX hydrolase | 0.66 | AO353_17105 | | ABC transporter ATP-binding protein | low | > 101 |
| Burkholderia phytofirmans PsJN | 0.28 | BPHYT_RS03365 | | NUDIX hydrolase | 0.47 | BPHYT_RS15590 | | amino acid ABC transporter ATPase | low | > 109 |
| Ralstonia solanacearum PSI07 | 0.28 | RPSI07_RS11560 | | NUDIX hydrolase | 0.48 | RPSI07_RS00085 | | ABC transporter ATP-binding protein | low | > 81 |
| Pseudomonas stutzeri RCH2 | 0.28 | Psest_2022 | | ADP-ribose pyrophosphatase | 0.67 | Psest_1308 | | ABC-type branched-chain amino acid transport systems, ATPase component | low | > 67 |
| Ralstonia solanacearum GMI1000 | 0.27 | RS_RS13630 | | NUDIX hydrolase | 0.48 | RS_RS17280 | | ABC transporter ATP-binding protein | low | > 80 |
| Acidovorax sp. GW101-3H11 | 0.27 | Ac3H11_4361 | | NTP pyrophosphohydrolases including oxidative damage repair enzymes | 0.48 | Ac3H11_1692 | | ABC transporter for glutamine/isoleucine/leucine/phenylalanine/proline/serine/tyrosine, ATPase component 2 (from data) | low | > 79 |
| Variovorax sp. SCN45 | 0.27 | GFF4911 | | Nudix-like NDP and NTP phosphohydrolase NudJ | 0.51 | GFF2170 | | Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1) | low | > 127 |
| Pseudomonas fluorescens FW300-N2C3 | 0.27 | AO356_22115 | | NUDIX hydrolase | 0.66 | AO356_05340 | | ABC transporter ATP-binding protein | low | > 104 |
| Paraburkholderia graminis OAS925 | 0.27 | ABIE53_000811 | | 8-oxo-dGTP pyrophosphatase MutT (NUDIX family) | 0.52 | ABIE53_005651 | | branched-chain amino acid transport system ATP-binding protein | low | > 113 |
| Paraburkholderia sabiae LMG 24235 | 0.26 | QEN71_RS26735 | | NUDIX hydrolase | 0.48 | QEN71_RS03120 | | ABC transporter ATP-binding protein | low | > 153 |
| Pseudomonas simiae WCS417 | 0.26 | PS417_16535 | | NUDIX hydrolase | 0.67 | PS417_06595 | | ABC transporter ATP-binding protein | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.26 | GFF2602 | | NTP pyrophosphohydrolases including oxidative damage repair enzymes | 0.48 | GFF781 | | Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1) | low | > 90 |
| Pseudomonas syringae pv. syringae B728a | 0.26 | Psyr_3189 | | NUDIX hydrolase | 0.70 | Psyr_3849 | | L-isoleucine ABC transporter ATP-binding protein / L-leucine ABC transporter ATP-binding protein / L-valine ABC transporter ATP-binding protein | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.26 | Psyr_3189 | | NUDIX hydrolase | 0.70 | Psyr_3849 | | L-isoleucine ABC transporter ATP-binding protein / L-leucine ABC transporter ATP-binding protein / L-valine ABC transporter ATP-binding protein | low | > 86 |
| Variovorax sp. OAS795 | 0.26 | ABID97_RS04420 | | NUDIX hydrolase | 0.55 | ABID97_RS27565 | | ABC transporter ATP-binding protein | low | > 91 |
| Pseudomonas putida KT2440 | 0.25 | PP_4013 | | MutT/nudix family protein | 0.66 | PP_1137 | | high-affinity branched-chain amino acid transporter, ATP binding | low | > 96 |
| Herbaspirillum seropedicae SmR1 | 0.24 | HSERO_RS03475 | | NUDIX hydrolase | 0.70 | HSERO_RS08290 | | leucine/isoleucine/valine transporter ATP-binding subunit | low | > 78 |
| Cupriavidus basilensis FW507-4G11 | 0.23 | RR42_RS17470 | | NUDIX hydrolase | 0.68 | RR42_RS14405 | | leucine/isoleucine/valine transporter ATP-binding subunit | low | > 128 |
Not shown: 12 genomes with orthologs for HER17_RS11620 only; 16 genomes with orthologs for HER17_RS00515 only