| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pectobacterium carotovorum WPP14 | 1.0 | HER17_RS11620 | | NUDIX hydrolase | 1.0 | HER17_RS00500 | | high-affinity branched-chain amino acid ABC transporter permease LivH | 0.81 | 3 |
| Escherichia coli BL21 | 0.78 | ECD_01132 | | bifunctional thiamine pyrimidine pyrophosphate hydrolase and thiamine pyrophosphate hydrolase | 0.88 | ECD_03306 | | branched-chain amino acid ABC transporter permease | — | — |
| Escherichia coli ECOR27 | 0.78 | NOLOHH_20895 | nudJ | phosphatase NudJ | 0.88 | NOLOHH_08540 | livH | high-affinity branched-chain amino acid ABC transporter permease LivH | low | > 75 |
| Escherichia coli ECRC98 | 0.78 | JDDGAC_06615 | nudJ | phosphatase NudJ | 0.88 | JDDGAC_20375 | livH | high-affinity branched-chain amino acid ABC transporter permease LivH | low | > 86 |
| Escherichia coli ECRC62 | 0.78 | BNILDI_19060 | nudJ | phosphatase NudJ | 0.88 | BNILDI_02965 | livH | high-affinity branched-chain amino acid ABC transporter permease LivH | low | > 75 |
| Escherichia coli ECRC100 | 0.78 | OKFHMN_00750 | nudJ | phosphatase NudJ | 0.88 | OKFHMN_16745 | livH | high-affinity branched-chain amino acid ABC transporter permease LivH | low | > 80 |
| Escherichia coli ECRC102 | 0.78 | NIAGMN_24895 | nudJ | phosphatase NudJ | 0.88 | NIAGMN_14515 | livH | high-affinity branched-chain amino acid ABC transporter permease LivH | — | — |
| Escherichia coli ECRC101 | 0.78 | MCAODC_22335 | nudJ | phosphatase NudJ | 0.88 | MCAODC_07275 | livH | high-affinity branched-chain amino acid ABC transporter permease LivH | low | > 87 |
| Escherichia fergusonii Becca | 0.78 | EFB2_02841 | | Phosphatase NudJ | 0.88 | EFB2_00365 | | High-affinity branched-chain amino acid transport system permease protein LivH | low | > 86 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.78 | OHPLBJKB_02534 | | Phosphatase NudJ | 0.88 | OHPLBJKB_00246 | | High-affinity branched-chain amino acid transport system permease protein LivH | low | > 73 |
| Escherichia coli Nissle 1917 | 0.78 | ECOLIN_RS06630 | | phosphatase NudJ | 0.88 | ECOLIN_RS19770 | | high-affinity branched-chain amino acid ABC transporter permease LivH | — | — |
| Escherichia coli ECOR38 | 0.78 | HEPCGN_24225 | nudJ | phosphatase NudJ | 0.88 | HEPCGN_15565 | livH | high-affinity branched-chain amino acid ABC transporter permease LivH | low | > 87 |
| Escherichia coli ECRC99 | 0.78 | KEDOAH_24835 | nudJ | phosphatase NudJ | 0.88 | KEDOAH_11395 | livH | high-affinity branched-chain amino acid ABC transporter permease LivH | — | — |
| Escherichia coli BW25113 | 0.78 | b1134 | ymfB | bifunctional thiamin pyrimidine pyrophosphate hydrolase/ thiamin pyrophosphate hydrolase (NCBI) | 0.88 | b3457 | livH | leucine/isoleucine/valine transporter subunit (NCBI) | low | > 76 |
| Dickeya dadantii 3937 | 0.77 | DDA3937_RS11480 | | NUDIX hydrolase | 0.97 | DDA3937_RS00665 | | high-affinity branched-chain amino acid ABC transporter permease LivH | low | > 74 |
| Serratia liquefaciens MT49 | 0.77 | IAI46_10445 | | NUDIX hydrolase | 0.95 | IAI46_00965 | | high-affinity branched-chain amino acid ABC transporter permease LivH | low | > 86 |
| Dickeya dianthicola 67-19 | 0.76 | HGI48_RS11525 | | NUDIX hydrolase | 0.97 | HGI48_RS20725 | | high-affinity branched-chain amino acid ABC transporter permease LivH | low | > 71 |
| Dickeya dianthicola ME23 | 0.76 | DZA65_RS11860 | | NUDIX hydrolase | 0.97 | DZA65_RS21735 | | high-affinity branched-chain amino acid ABC transporter permease LivH | low | > 75 |
| Klebsiella michiganensis M5al | 0.75 | BWI76_RS11320 | | NUDIX hydrolase | 0.88 | BWI76_RS26345 | | branched-chain amino acid ABC transporter permease LivH | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.75 | GFF3419 | | Nudix-like NDP and NTP phosphohydrolase YmfB | 0.88 | GFF549 | | High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) | low | > 78 |
| Enterobacter sp. TBS_079 | 0.71 | MPMX20_01818 | | Phosphatase NudJ | 0.88 | MPMX20_04333 | | High-affinity branched-chain amino acid transport system permease protein LivH | low | > 85 |
| Erwinia tracheiphila SCR3 | 0.71 | LU632_RS14570 | | NUDIX hydrolase | 0.89 | LU632_RS19250 | livH | high-affinity branched-chain amino acid ABC transporter permease LivH | low | > 74 |
| Rahnella sp. WP5 | 0.71 | EX31_RS24580 | | NUDIX hydrolase | 0.93 | EX31_RS14800 | | high-affinity branched-chain amino acid ABC transporter permease LivH | low | > 89 |
| Enterobacter asburiae PDN3 | 0.71 | EX28DRAFT_1796 | | ADP-ribose pyrophosphatase | 0.89 | EX28DRAFT_4289 | | Branched-chain amino acid ABC-type transport system, permease components | low | > 76 |
| Pantoea sp. MT58 | 0.65 | IAI47_11910 | | NUDIX hydrolase | 0.90 | IAI47_01570 | | high-affinity branched-chain amino acid ABC transporter permease LivH | low | > 76 |
| Shewanella loihica PV-4 | 0.41 | Shew_1561 | | NUDIX hydrolase (RefSeq) | 0.20 | Shew_2609 | | inner-membrane translocator (RefSeq) | low | > 60 |
| Dechlorosoma suillum PS | 0.33 | Dsui_3338 | | Zn-finger containing NTP pyrophosphohydrolase | 0.40 | Dsui_0629 | | branched-chain amino acid ABC-type transport system, permease component | low | > 51 |
| Marinobacter adhaerens HP15 | 0.32 | HP15_2085 | | MutT/nudix family protein | 0.60 | HP15_3056 | | high-affinity branched-chain amino acid ABC transporter, permease protein | low | > 73 |
| Pseudomonas sp. S08-1 | 0.32 | OH686_00215 | | Nudix-like NDP and NTP phosphohydrolase NudJ | 0.64 | OH686_04610 | | Branched-chain amino acid ABC transporter, permease protein LivH | low | > 80 |
| Ralstonia sp. UNC404CL21Col | 0.30 | ABZR87_RS01335 | | NUDIX hydrolase | 0.34 | ABZR87_RS00310 | | branched-chain amino acid ABC transporter permease | low | > 80 |
| Pseudomonas fluorescens GW456-L13 | 0.29 | PfGW456L13_2640 | | Nudix-like NDP and NTP phosphohydrolase YmfB | 0.63 | PfGW456L13_4608 | | High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) | low | > 87 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.29 | H281DRAFT_04652 | | ADP-ribose pyrophosphatase YjhB, NUDIX family | 0.38 | H281DRAFT_04062 | | amino acid/amide ABC transporter membrane protein 1, HAAT family | low | > 103 |
| Pseudomonas sp. RS175 | 0.29 | PFR28_02618 | | Phosphatase NudJ | 0.64 | PFR28_00539 | | High-affinity branched-chain amino acid transport system permease protein LivH | low | > 88 |
| Ralstonia solanacearum IBSBF1503 | 0.29 | RALBFv3_RS05740 | | NUDIX hydrolase | 0.37 | RALBFv3_RS04690 | | branched-chain amino acid ABC transporter permease | low | > 76 |
| Ralstonia solanacearum UW163 | 0.29 | UW163_RS07885 | | NUDIX hydrolase | 0.37 | UW163_RS08980 | | branched-chain amino acid ABC transporter permease | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.29 | Pf6N2E2_287 | | Nudix-like NDP and NTP phosphohydrolase YmfB | 0.64 | Pf6N2E2_2923 | | ABC transporter for L-leucine/L-phenylalanine/D-alanine, permease component 1 LivH (from data) | low | > 103 |
| Pseudomonas fluorescens SBW25-INTG | 0.28 | PFLU_RS18575 | | NUDIX hydrolase | 0.63 | PFLU_RS06640 | | high-affinity branched-chain amino acid ABC transporter permease LivH | low | > 109 |
| Pseudomonas fluorescens FW300-N1B4 | 0.28 | Pf1N1B4_4049 | | Nudix-like NDP and NTP phosphohydrolase YmfB | 0.63 | Pf1N1B4_3217 | | High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) | low | > 87 |
| Pseudomonas fluorescens SBW25 | 0.28 | PFLU_RS18575 | | NUDIX hydrolase | 0.63 | PFLU_RS06640 | | high-affinity branched-chain amino acid ABC transporter permease LivH | 0.39 | 63 |
| Pseudomonas fluorescens FW300-N2E3 | 0.28 | AO353_27700 | | NUDIX hydrolase | 0.62 | AO353_17120 | | branched-chain amino acid transporter permease subunit LivH | low | > 101 |
| Burkholderia phytofirmans PsJN | 0.28 | BPHYT_RS03365 | | NUDIX hydrolase | 0.39 | BPHYT_RS31740 | | ABC transporter permease | low | > 109 |
| Pseudomonas stutzeri RCH2 | 0.28 | Psest_2022 | | ADP-ribose pyrophosphatase | 0.67 | Psest_1311 | | Branched-chain amino acid ABC-type transport system, permease components | 0.17 | 58 |
| Ralstonia solanacearum PSI07 | 0.28 | RPSI07_RS11560 | | NUDIX hydrolase | 0.36 | RPSI07_RS12695 | | branched-chain amino acid ABC transporter permease | low | > 81 |
| Ralstonia solanacearum GMI1000 | 0.27 | RS_RS13630 | | NUDIX hydrolase | 0.37 | RS_RS12250 | | branched-chain amino acid ABC transporter permease | low | > 80 |
| Acidovorax sp. GW101-3H11 | 0.27 | Ac3H11_4361 | | NTP pyrophosphohydrolases including oxidative damage repair enzymes | 0.39 | Ac3H11_1695 | | ABC transporter for glutamine/isoleucine/leucine/phenylalanine/proline/serine/tyrosine, permease component 1 (from data) | low | > 79 |
| Variovorax sp. SCN45 | 0.27 | GFF4911 | | Nudix-like NDP and NTP phosphohydrolase NudJ | 0.40 | GFF6033 | | Branched-chain amino acid ABC transporter, permease protein LivH (TC 3.A.1.4.1) | low | > 127 |
| Pseudomonas fluorescens FW300-N2C3 | 0.27 | AO356_22115 | | NUDIX hydrolase | 0.64 | AO356_05325 | | branched-chain amino acid transporter permease subunit LivH | low | > 104 |
| Paraburkholderia graminis OAS925 | 0.27 | ABIE53_000811 | | 8-oxo-dGTP pyrophosphatase MutT (NUDIX family) | 0.37 | ABIE53_003285 | | branched-chain amino acid transport system permease protein | low | > 113 |
| Paraburkholderia sabiae LMG 24235 | 0.26 | QEN71_RS26735 | | NUDIX hydrolase | 0.39 | QEN71_RS03105 | | branched-chain amino acid ABC transporter permease | low | > 153 |
| Pseudomonas simiae WCS417 | 0.26 | PS417_16535 | | NUDIX hydrolase | 0.63 | PS417_06610 | | branched-chain amino acid transporter permease subunit LivH | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.26 | GFF2602 | | NTP pyrophosphohydrolases including oxidative damage repair enzymes | 0.38 | GFF778 | | High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.26 | Psyr_3189 | | NUDIX hydrolase | 0.61 | Psyr_3846 | | L-valine ABC transporter membrane protein / L-isoleucine ABC transporter membrane protein / L-leucine ABC transporter membrane protein | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.26 | Psyr_3189 | | NUDIX hydrolase | 0.61 | Psyr_3846 | | L-valine ABC transporter membrane protein / L-isoleucine ABC transporter membrane protein / L-leucine ABC transporter membrane protein | low | > 86 |
| Variovorax sp. OAS795 | 0.26 | ABID97_RS04420 | | NUDIX hydrolase | 0.50 | ABID97_RS27580 | | branched-chain amino acid ABC transporter permease LivH | low | > 91 |
| Pseudomonas putida KT2440 | 0.25 | PP_4013 | | MutT/nudix family protein | 0.63 | PP_1140 | | branched chain amino acid transporter - permease subunit | low | > 96 |
| Herbaspirillum seropedicae SmR1 | 0.24 | HSERO_RS03475 | | NUDIX hydrolase | 0.60 | HSERO_RS08275 | | branched-chain amino acid transporter permease subunit LivH | 0.30 | 40 |
| Cupriavidus basilensis FW507-4G11 | 0.23 | RR42_RS17470 | | NUDIX hydrolase | 0.62 | RR42_RS14420 | | branched-chain amino acid transporter permease subunit LivH | low | > 128 |
Not shown: 11 genomes with orthologs for HER17_RS11620 only; 17 genomes with orthologs for HER17_RS00500 only