| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pectobacterium carotovorum WPP14 | 1.0 | HER17_RS02810 | | peroxide stress protein YaaA | 1.0 | HER17_RS00495 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.87 | 6 |
| Dickeya dadantii 3937 | 0.84 | DDA3937_RS18400 | | peroxide stress protein YaaA | 0.91 | DDA3937_RS00660 | | branched-chain amino acid ABC transporter substrate-binding protein | low | > 74 |
| Dickeya dianthicola ME23 | 0.82 | DZA65_RS19470 | | peroxide stress protein YaaA | 0.88 | DZA65_RS21740 | | branched-chain amino acid ABC transporter substrate-binding protein | low | > 75 |
| Escherichia coli ECOR38 | 0.82 | HEPCGN_09095 | yaaA | peroxide stress protein YaaA | 0.79 | HEPCGN_15560 | livK | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | 0.48 | 28 |
| Enterobacter sp. TBS_079 | 0.82 | MPMX20_00714 | | Peroxide stress resistance protein YaaA | 0.78 | MPMX20_04334 | | Leucine-specific-binding protein | low | > 85 |
| Escherichia coli Nissle 1917 | 0.82 | ECOLIN_RS00035 | | peroxide stress protein YaaA | 0.79 | ECOLIN_RS19775 | | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | low | > 55 |
| Escherichia fergusonii Becca | 0.82 | EFB2_04037 | | Peroxide stress resistance protein YaaA | 0.79 | EFB2_00364 | | Leucine-specific-binding protein | low | > 86 |
| Escherichia coli ECRC102 | 0.82 | NIAGMN_08940 | yaaA | peroxide stress protein YaaA | 0.79 | NIAGMN_14510 | livK | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.82 | OHPLBJKB_03654 | | hypothetical protein | 0.79 | OHPLBJKB_00245 | | Leucine-specific-binding protein | low | > 73 |
| Escherichia coli ECRC101 | 0.82 | MCAODC_01605 | yaaA | peroxide stress protein YaaA | 0.79 | MCAODC_07270 | livK | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | low | > 87 |
| Escherichia coli ECRC98 | 0.82 | JDDGAC_14685 | yaaA | peroxide stress protein YaaA | 0.79 | JDDGAC_20370 | livK | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | low | > 86 |
| Escherichia coli ECRC99 | 0.82 | KEDOAH_17065 | yaaA | peroxide stress protein YaaA | 0.79 | KEDOAH_11400 | livK | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | — | — |
| Dickeya dianthicola 67-19 | 0.82 | HGI48_RS18330 | | peroxide stress protein YaaA | 0.88 | HGI48_RS20730 | | high-affinity branched-chain amino acid ABC transporter substrate-binding protein | low | > 71 |
| Escherichia coli ECRC100 | 0.82 | OKFHMN_11090 | yaaA | peroxide stress protein YaaA | 0.79 | OKFHMN_16740 | livK | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | low | > 80 |
| Escherichia coli BL21 | 0.82 | ECD_00006 | | peroxide resistance protein, lowers intracellular iron | 0.78 | ECD_03307 | | leucine transporter subunit | low | > 61 |
| Enterobacter asburiae PDN3 | 0.81 | EX28DRAFT_3618 | | Uncharacterized protein conserved in bacteria | 0.79 | EX28DRAFT_4290 | | ABC-type branched-chain amino acid transport systems, periplasmic component | low | > 76 |
| Escherichia coli ECRC62 | 0.81 | BNILDI_08185 | yaaA | peroxide stress protein YaaA | 0.79 | BNILDI_02970 | livK | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | low | > 75 |
| Escherichia coli BW25113 | 0.81 | b0006 | yaaA | hypothetical protein (NCBI) | 0.79 | b3458 | livK | leucine transporter subunit (NCBI) | low | > 76 |
| Escherichia coli ECOR27 | 0.81 | NOLOHH_03420 | yaaA | peroxide stress protein YaaA | 0.79 | NOLOHH_08535 | livK | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | low | > 75 |
| Serratia liquefaciens MT49 | 0.80 | IAI46_03045 | | peroxide stress protein YaaA | 0.87 | IAI46_00960 | | branched-chain amino acid ABC transporter substrate-binding protein | low | > 86 |
| Klebsiella michiganensis M5al | 0.80 | BWI76_RS04260 | | peroxide stress protein YaaA | 0.77 | BWI76_RS26350 | | branched chain amino acid ABC transporter substrate-binding protein | low | > 92 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.79 | GFF1081 | | UPF0246 protein YaaA | 0.77 | GFF545 | | High-affinity leucine-specific transport system, periplasmic binding protein LivK (TC 3.A.1.4.1) | low | > 78 |
| Pantoea sp. MT58 | 0.79 | IAI47_16200 | | peroxide stress protein YaaA | 0.78 | IAI47_01565 | | branched-chain amino acid ABC transporter substrate-binding protein | low | > 76 |
| Erwinia tracheiphila SCR3 | 0.77 | LU632_RS02625 | yaaA | peroxide stress protein YaaA | 0.82 | LU632_RS19255 | | branched-chain amino acid ABC transporter substrate-binding protein | low | > 74 |
| Rahnella sp. WP5 | 0.76 | EX31_RS03930 | | peroxide stress protein YaaA | 0.88 | EX31_RS14805 | | branched-chain amino acid ABC transporter substrate-binding protein | low | > 89 |
| Marinobacter adhaerens HP15 | 0.69 | HP15_1223 | | protein YaaA | 0.58 | HP15_3055 | | high-affinity leucine-specific leucine-specific-binding periplasmic protein of high-affinity branched-chain amino acid ABC transporter transport system periplasmic binding protein | low | > 73 |
| Pseudomonas putida KT2440 | 0.67 | PP_1289 | | conserved protein of unknown function, DUF328 family | 0.59 | PP_1141 | | branched-chain amino acids ABC transporter - periplasmic leucine binding subunit | low | > 96 |
| Pseudomonas sp. RS175 | 0.67 | PFR28_03554 | | Peroxide stress resistance protein YaaA | 0.59 | PFR28_00540 | | Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein | low | > 88 |
| Pseudomonas fluorescens FW300-N2C3 | 0.67 | AO356_17320 | | hypothetical protein | 0.61 | AO356_05320 | | leucine ABC transporter substrate-binding protein | low | > 104 |
| Pseudomonas fluorescens FW300-N2E3 | 0.67 | AO353_04675 | | hypothetical protein | 0.61 | AO353_17125 | | leucine ABC transporter substrate-binding protein | low | > 101 |
| Pseudomonas fluorescens GW456-L13 | 0.66 | PfGW456L13_1686 | | UPF0246 protein YaaA | 0.60 | PfGW456L13_4606 | | High-affinity leucine-specific transport system, periplasmic binding protein LivK (TC 3.A.1.4.1) | low | > 87 |
| Pseudomonas fluorescens FW300-N1B4 | 0.66 | Pf1N1B4_981 | | UPF0246 protein YaaA | 0.60 | Pf1N1B4_3218 | | High-affinity leucine-specific transport system, periplasmic binding protein LivK (TC 3.A.1.4.1) | low | > 87 |
| Pseudomonas fluorescens FW300-N2E2 | 0.66 | Pf6N2E2_5389 | | UPF0246 protein YaaA | 0.60 | Pf6N2E2_2921 | | ABC transporter for L-leucine/L-phenylalanine/D-alanine, substrate-binding component LivK (from data) | low | > 103 |
| Pseudomonas syringae pv. syringae B728a | 0.65 | Psyr_1064 | | Protein of unknown function DUF328 | 0.62 | Psyr_3845 | | L-leucine-binding protein / L-valine-binding protein / L-isoleucine-binding protein | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.65 | Psyr_1064 | | Protein of unknown function DUF328 | 0.62 | Psyr_3845 | | L-leucine-binding protein / L-valine-binding protein / L-isoleucine-binding protein | low | > 86 |
| Pseudomonas simiae WCS417 | 0.65 | PS417_04850 | | hypothetical protein | 0.59 | PS417_06615 | | ABC transporter for branched-chain amino acids, substrate-binding component (from data) | low | > 88 |
| Pseudomonas stutzeri RCH2 | 0.64 | Psest_3173 | | Uncharacterized protein conserved in bacteria | 0.61 | Psest_1312 | | ABC-type branched-chain amino acid transport systems, periplasmic component | low | > 67 |
| Pseudomonas sp. S08-1 | 0.64 | OH686_07085 | | UPF0246 protein YaaA | 0.60 | OH686_04605 | | Branched-chain amino acid ABC transporter, substrate-binding protein LivJ | low | > 80 |
| Pseudomonas fluorescens SBW25 | 0.63 | PFLU_RS04920 | | peroxide stress protein YaaA | 0.59 | PFLU_RS06645 | | branched-chain amino acid ABC transporter substrate-binding protein | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.63 | PFLU_RS04920 | | peroxide stress protein YaaA | 0.59 | PFLU_RS06645 | | branched-chain amino acid ABC transporter substrate-binding protein | low | > 109 |
| Ralstonia sp. UNC404CL21Col | 0.61 | ABZR87_RS14635 | | peroxide stress protein YaaA | 0.23 | ABZR87_RS00315 | | branched-chain amino acid ABC transporter substrate-binding protein | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.59 | RPSI07_RS14595 | | peroxide stress protein YaaA | 0.24 | RPSI07_RS12690 | | branched-chain amino acid ABC transporter substrate-binding protein | low | > 81 |
| Ralstonia solanacearum IBSBF1503 | 0.59 | RALBFv3_RS02720 | | peroxide stress protein YaaA | 0.24 | RALBFv3_RS04695 | | branched-chain amino acid ABC transporter substrate-binding protein | low | > 76 |
| Ralstonia solanacearum UW163 | 0.59 | UW163_RS11005 | | peroxide stress protein YaaA | 0.24 | UW163_RS08975 | | branched-chain amino acid ABC transporter substrate-binding protein | — | — |
| Ralstonia solanacearum GMI1000 | 0.59 | RS_RS10095 | | peroxide stress protein YaaA | 0.24 | RS_RS12255 | | branched-chain amino acid ABC transporter substrate-binding protein | low | > 80 |
| Paraburkholderia graminis OAS925 | 0.58 | ABIE53_001622 | | cytoplasmic iron level regulating protein YaaA (DUF328/UPF0246 family) | 0.25 | ABIE53_000461 | | branched-chain amino acid transport system substrate-binding protein | low | > 113 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.57 | H281DRAFT_04599 | | hypothetical protein | 0.25 | H281DRAFT_02161 | | amino acid/amide ABC transporter substrate-binding protein, HAAT family | low | > 103 |
| Burkholderia phytofirmans PsJN | 0.56 | BPHYT_RS06780 | | hypothetical protein | 0.24 | BPHYT_RS01885 | | branched-chain amino acid ABC transporter substrate-binding protein | low | > 109 |
| Paraburkholderia sabiae LMG 24235 | 0.56 | QEN71_RS24000 | | peroxide stress protein YaaA | 0.25 | QEN71_RS00600 | | branched-chain amino acid ABC transporter substrate-binding protein | low | > 153 |
| Cupriavidus basilensis FW507-4G11 | 0.56 | RR42_RS05780 | | hypothetical protein | 0.51 | RR42_RS14425 | | leucine ABC transporter substrate-binding protein | low | > 128 |
| Acidovorax sp. GW101-3H11 | 0.53 | Ac3H11_1593 | | UPF0246 protein YaaA | 0.20 | Ac3H11_4169 | | Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1) | low | > 79 |
| Variovorax sp. SCN45 | 0.48 | GFF6020 | | UPF0246 protein YaaA | 0.27 | GFF237 | | ABC-type branched-chain amino acid transport systems, periplasmic component | low | > 127 |
| Variovorax sp. OAS795 | 0.47 | ABID97_RS07905 | | peroxide stress protein YaaA | 0.30 | ABID97_RS27585 | | branched-chain amino acid ABC transporter substrate-binding protein | low | > 91 |
| Castellaniella sp019104865 MT123 | 0.47 | ABCV34_RS01170 | | peroxide stress protein YaaA | 0.47 | ABCV34_RS03585 | | branched-chain amino acid ABC transporter substrate-binding protein | low | > 48 |
| Dinoroseobacter shibae DFL-12 | 0.43 | Dshi_3333 | | protein of unknown function DUF328 (RefSeq) | 0.12 | Dshi_1522 | | Extracellular ligand-binding receptor (RefSeq) | low | > 64 |
| Phaeobacter inhibens DSM 17395 | 0.43 | PGA1_c31890 | | Uncharacterized protein conserved in bacteria | 0.10 | PGA1_c15890 | | extracellular ligand-binding receptor | low | > 62 |
Not shown: 19 genomes with orthologs for HER17_RS02810 only; 14 genomes with orthologs for HER17_RS00495 only