Conservation of cofitness between HEPCGN_20590 and HEPCGN_05610 in Escherichia coli ECOR38

53 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECOR38 1.0 HEPCGN_20590 yfhL 4Fe-4S dicluster ferredoxin YfhL 1.0 HEPCGN_05610 ydiK AI-2E family transporter YdiK 0.54 16
Escherichia coli ECRC101 1.00 MCAODC_11975 yfhL 4Fe-4S dicluster ferredoxin YfhL 0.99 MCAODC_18185 ydiK AI-2E family transporter YdiK low > 87
Escherichia coli ECRC98 1.00 JDDGAC_25110 yfhL 4Fe-4S dicluster ferredoxin YfhL 0.99 JDDGAC_01800 ydiK AI-2E family transporter YdiK low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01145 Ferredoxin YfhL 1.00 OHPLBJKB_02036 Putative transport protein YdiK low > 73
Escherichia coli ECRC100 1.00 OKFHMN_21445 yfhL 4Fe-4S dicluster ferredoxin YfhL 0.99 OKFHMN_27225 ydiK AI-2E family transporter YdiK low > 80
Escherichia coli ECRC99 1.00 KEDOAH_06775 yfhL 4Fe-4S dicluster ferredoxin YfhL 0.99 KEDOAH_00885 ydiK AI-2E family transporter YdiK — —
Escherichia coli ECRC102 1.00 NIAGMN_19215 yfhL 4Fe-4S dicluster ferredoxin YfhL 0.99 NIAGMN_00840 ydiK AI-2E family transporter YdiK — —
Escherichia coli ECRC62 0.99 BNILDI_11920 yfhL 4Fe-4S dicluster ferredoxin YfhL 1.00 BNILDI_16535 ydiK AI-2E family transporter YdiK low > 75
Escherichia coli BL21 0.99 ECD_02456 putative 4Fe-4S cluster-containing protein 1.00 ECD_01657 UPF0118 family inner membrane protein low > 61
Escherichia coli BW25113 0.99 b2562 yfhL predicted 4Fe-4S cluster-containing protein (NCBI) 1.00 b1688 ydiK predicted inner membrane protein (NCBI) low > 76
Escherichia coli Nissle 1917 0.99 ECOLIN_RS14495 4Fe-4S dicluster ferredoxin YfhL 1.00 ECOLIN_RS09435 AI-2E family transporter YdiK — —
Escherichia coli ECOR27 0.99 NOLOHH_13120 yfhL 4Fe-4S dicluster ferredoxin YfhL 1.00 NOLOHH_17745 ydiK AI-2E family transporter YdiK low > 75
Escherichia fergusonii Becca 0.99 EFB2_01334 Ferredoxin YfhL 1.00 EFB2_02304 Putative transport protein YdiK low > 86
Enterobacter asburiae PDN3 0.95 EX28DRAFT_0084 4Fe-4S dicluster domain 0.79 EX28DRAFT_1697 Predicted permease low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.95 GFF2470 4Fe-4S ferredoxin, iron-sulfur binding 0.88 GFF3553 Putative membrane protein low > 78
Enterobacter sp. TBS_079 0.93 MPMX20_03433 Ferredoxin YfhL 0.81 MPMX20_01925 Putative transport protein YdiK low > 85
Klebsiella michiganensis M5al 0.93 BWI76_RS21295 ferredoxin 0.79 BWI76_RS17055 hypothetical protein — —
Serratia liquefaciens MT49 0.84 IAI46_19525 YfhL family 4Fe-4S dicluster ferredoxin 0.65 IAI46_11125 AI-2E family transporter YdiK low > 86
Pectobacterium carotovorum WPP14 0.83 HER17_RS05840 YfhL family 4Fe-4S dicluster ferredoxin 0.64 HER17_RS08900 AI-2E family transporter YdiK low > 75
Dickeya dianthicola 67-19 0.81 HGI48_RS15795 YfhL family 4Fe-4S dicluster ferredoxin 0.63 HGI48_RS12865 AI-2E family transporter YdiK low > 71
Dickeya dadantii 3937 0.81 DDA3937_RS15710 YfhL family 4Fe-4S dicluster ferredoxin 0.63 DDA3937_RS12800 AI-2E family transporter YdiK low > 74
Dickeya dianthicola ME23 0.80 DZA65_RS16875 YfhL family 4Fe-4S dicluster ferredoxin 0.63 DZA65_RS13330 AI-2E family transporter YdiK low > 75
Rahnella sp. WP5 0.80 EX31_RS21860 YfhL family 4Fe-4S dicluster ferredoxin 0.66 EX31_RS13930 AI-2E family transporter YdiK low > 89
Erwinia tracheiphila SCR3 0.78 LU632_RS15360 YfhL family 4Fe-4S dicluster ferredoxin 0.68 LU632_RS11035 ydiK AI-2E family transporter YdiK — —
Pantoea sp. MT58 0.76 IAI47_04905 YfhL family 4Fe-4S dicluster ferredoxin 0.67 IAI47_10895 AI-2E family transporter YdiK low > 76
Vibrio cholerae E7946 ATCC 55056 0.71 CSW01_03745 ferredoxin 0.16 CSW01_03285 AI-2E family transporter low > 62
Cupriavidus basilensis FW507-4G11 0.61 RR42_RS02000 ferredoxin 0.24 RR42_RS03900 membrane protein — —
Dechlorosoma suillum PS 0.60 Dsui_1029 hypothetical protein 0.20 Dsui_0423 putative permease — —
Shewanella oneidensis MR-1 0.59 SO1251 ferredoxin, 4Fe-4S (NCBI ptt file) 0.11 SO0472 membrane protein, putative (NCBI ptt file) — —
Acidovorax sp. GW101-3H11 0.59 Ac3H11_4828 Ferredoxin 0.11 Ac3H11_2468 membrane protein, putative low > 79
Ralstonia sp. UNC404CL21Col 0.58 ABZR87_RS06970 YfhL family 4Fe-4S dicluster ferredoxin 0.10 ABZR87_RS08310 AI-2E family transporter low > 80
Shewanella sp. ANA-3 0.58 Shewana3_1067 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein (RefSeq) 0.21 Shewana3_2910 hypothetical protein (RefSeq) — —
Paraburkholderia sabiae LMG 24235 0.58 QEN71_RS01675 YfhL family 4Fe-4S dicluster ferredoxin 0.19 QEN71_RS23970 AI-2E family transporter low > 153
Shewanella loihica PV-4 0.57 Shew_2785 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein (RefSeq) 0.23 Shew_0691 hypothetical protein (RefSeq) low > 60
Pseudomonas syringae pv. syringae B728a 0.57 Psyr_4759 4Fe-4S ferredoxin, iron-sulfur binding protein 0.27 Psyr_2029 Protein of unknown function UPF0118 — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.57 Psyr_4759 4Fe-4S ferredoxin, iron-sulfur binding protein 0.27 Psyr_2029 Protein of unknown function UPF0118 — —
Paraburkholderia graminis OAS925 0.56 ABIE53_000703 ferredoxin 0.22 ABIE53_001629 putative PurR-regulated permease PerM low > 113
Paraburkholderia bryophila 376MFSha3.1 0.56 H281DRAFT_01943 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 0.21 H281DRAFT_04605 Predicted PurR-regulated permease PerM low > 103
Acinetobacter radioresistens SK82 0.56 MPMX26_00739 Ferredoxin 0.18 MPMX26_02768 Putative transport protein YdiK low > 36
Burkholderia phytofirmans PsJN 0.55 BPHYT_RS02825 ferredoxin 0.21 BPHYT_RS06810 membrane protein low > 109
Pseudomonas sp. S08-1 0.54 OH686_14145 Uncharacterized ferredoxin-like protein YfhL 0.21 OH686_01920 Uncharacterized UPF0118 membrane protein low > 80
Pseudomonas sp. RS175 0.54 PFR28_04270 Ferredoxin 0.26 PFR28_03068 Putative transport protein YdiK — —
Pseudomonas fluorescens FW300-N2C3 0.54 AO356_13280 ferredoxin 0.26 AO356_19830 hypothetical protein — —
Pseudomonas fluorescens FW300-N2E2 0.54 Pf6N2E2_4571 4Fe-4S ferredoxin, iron-sulfur binding 0.25 Pf6N2E2_5882 Putative membrane protein — —
Pseudomonas putida KT2440 0.54 PP_5124 putative 4Fe-4S cluster-containing protein 0.25 PP_4162 conserved membrane protein of unknown function — —
Pseudomonas simiae WCS417 0.53 PS417_26865 ferredoxin 0.26 PS417_09040 hypothetical protein — —
Pseudomonas fluorescens GW456-L13 0.53 PfGW456L13_980 4Fe-4S ferredoxin, iron-sulfur binding 0.24 PfGW456L13_2055 Putative membrane protein — —
Pseudomonas fluorescens SBW25-INTG 0.53 PFLU_RS28510 YfhL family 4Fe-4S dicluster ferredoxin 0.27 PFLU_RS09095 AI-2E family transporter — —
Pseudomonas fluorescens FW300-N1B4 0.53 Pf1N1B4_2311 4Fe-4S ferredoxin, iron-sulfur binding 0.24 Pf1N1B4_3528 Putative membrane protein — —
Pseudomonas fluorescens SBW25 0.53 PFLU_RS28510 YfhL family 4Fe-4S dicluster ferredoxin 0.27 PFLU_RS09095 AI-2E family transporter low > 109
Pseudomonas fluorescens FW300-N2E3 0.53 AO353_08310 ferredoxin 0.23 AO353_01690 hypothetical protein — —
Pseudomonas stutzeri RCH2 0.51 Psest_0243 hypothetical protein 0.22 Psest_2464 Predicted permease low > 67
Variovorax sp. SCN45 0.51 GFF2345 Uncharacterized ferredoxin-like protein YfhL 0.11 GFF1804 Uncharacterized UPF0118 membrane protein low > 127
Rhodopseudomonas palustris CGA009 0.47 TX73_003430 YfhL family 4Fe-4S dicluster ferredoxin 0.12 TX73_002840 AI-2E family transporter low > 86

Not shown: 18 genomes with orthologs for HEPCGN_20590 only; 12 genomes with orthologs for HEPCGN_05610 only