Conservation of cofitness between Psest_0306 and Psest_0954 in Pseudomonas stutzeri RCH2

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_0306 adenosylmethionine-8-amino-7-oxononanoate transaminase 1.0 Psest_0954 Fe-S oxidoreductase 0.56 14
Pseudomonas fluorescens FW300-N2E3 0.84 AO353_08045 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.85 AO353_05705 oxidoreductase low > 101
Pseudomonas fluorescens GW456-L13 0.84 PfGW456L13_1044 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.85 PfGW456L13_5115 Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE low > 87
Pseudomonas fluorescens FW300-N2C3 0.83 AO356_13570 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.85 AO356_07555 oxidoreductase low > 104
Pseudomonas sp. RS175 0.83 PFR28_04208 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.85 PFR28_00062 Lactate utilization protein A low > 88
Pseudomonas fluorescens FW300-N2E2 0.83 Pf6N2E2_4631 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.85 Pf6N2E2_3381 Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE low > 103
Pseudomonas fluorescens FW300-N1B4 0.83 Pf1N1B4_2377 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.85 Pf1N1B4_1187 Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE low > 87
Marinobacter adhaerens HP15 0.68 HP15_2925 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.74 HP15_4088 L-lactate dehydrogenase, LutA subunit (from data) low > 73
Paraburkholderia graminis OAS925 0.49 ABIE53_000580 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.35 ABIE53_002787 L-lactate dehydrogenase complex protein LldE low > 113
Burkholderia phytofirmans PsJN 0.49 BPHYT_RS02165 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.34 BPHYT_RS12810 Fe-S oxidoreductase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.49 H281DRAFT_02094 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.34 H281DRAFT_00472 L-lactate dehydrogenase complex protein LldE low > 103
Dechlorosoma suillum PS 0.49 Dsui_2880 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.34 Dsui_1582 Fe-S oxidoreductase low > 51
Paraburkholderia sabiae LMG 24235 0.47 QEN71_RS01100 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.56 QEN71_RS10140 (Fe-S)-binding protein — —
Ralstonia sp. UNC404CL21Col 0.47 ABZR87_RS12335 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.34 ABZR87_RS13410 (Fe-S)-binding protein low > 80
Ralstonia solanacearum PSI07 0.47 RPSI07_RS16705 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.34 RPSI07_RS15875 (Fe-S)-binding protein low > 81
Ralstonia solanacearum IBSBF1503 0.46 RALBFv3_RS00815 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.34 RALBFv3_RS01610 (Fe-S)-binding protein low > 76
Ralstonia solanacearum UW163 0.46 UW163_RS14150 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.34 UW163_RS14920 (Fe-S)-binding protein — —
Ralstonia solanacearum GMI1000 0.46 RS_RS07430 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.33 RS_RS08110 (Fe-S)-binding protein low > 80
Desulfovibrio vulgaris Miyazaki F 0.45 DvMF_1002 adenosylmethionine-8-amino-7-oxononanoate aminotransferase (RefSeq) 0.49 DvMF_0397 protein of unknown function DUF224 cysteine-rich region domain protein (RefSeq) low > 51
Cupriavidus basilensis FW507-4G11 0.42 RR42_RS00925 adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA 0.57 RR42_RS21295 L-lactate dehydrogenase, LutA subunit (from data) low > 128
Pedobacter sp. GW460-11-11-14-LB5 0.39 CA265_RS07530 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.31 CA265_RS07800 Fe-S oxidoreductase low > 88
Pontibacter actiniarum KMM 6156, DSM 19842 0.35 CA264_02410 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.31 CA264_09225 Fe-S oxidoreductase low > 74
Magnetospirillum magneticum AMB-1 0.33 AMB_RS13895 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.48 AMB_RS20885 (Fe-S)-binding protein — —
Azospirillum brasilense Sp245 0.32 AZOBR_RS31120 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.51 AZOBR_RS25115 Fe-S oxidoreductase low > 97
Phocaeicola vulgatus CL09T03C04 0.32 HMPREF1058_RS17955 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.22 HMPREF1058_RS18100 (Fe-S)-binding protein low > 67
Phocaeicola dorei CL03T12C01 0.32 ABI39_RS14245 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.22 ABI39_RS14425 (Fe-S)-binding protein low > 72
Dickeya dadantii 3937 0.32 DDA3937_RS08505 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.28 DDA3937_RS07205 (Fe-S)-binding protein low > 74
Dickeya dianthicola ME23 0.32 DZA65_RS08960 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.29 DZA65_RS08665 (Fe-S)-binding protein low > 75
Escherichia fergusonii Becca 0.31 EFB2_03331 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.26 EFB2_03734 Lactate utilization protein A low > 86
Escherichia coli Nissle 1917 0.31 ECOLIN_RS04125 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.26 ECOLIN_RS02000 (Fe-S)-binding protein low > 52
Dickeya dianthicola 67-19 0.31 HGI48_RS08670 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.29 HGI48_RS08070 (Fe-S)-binding protein low > 71
Escherichia coli ECOR38 0.31 HEPCGN_01635 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.27 HEPCGN_10705 Cysteine-rich domain-containing protein low > 85
Escherichia coli BW25113 0.31 b0774 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase (NCBI) 0.26 b0306 ykgE predicted oxidoreductase (NCBI) low > 76
Parabacteroides merdae CL09T00C40 0.31 HMPREF1078_RS15295 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.24 HMPREF1078_RS01305 (Fe-S)-binding protein low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.31 OHPLBJKB_02939 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.26 OHPLBJKB_03376 Lactate utilization protein A low > 73
Escherichia coli BL21 0.31 ECD_00741 7,8-diaminopelargonic acid synthase, PLP-dependent 0.26 ECD_00262 cysteine-rich LutA family protein; putative electron transport chain YkgEFG component 0.54 12
Escherichia coli ECOR27 0.31 NOLOHH_22775 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.26 NOLOHH_01920 ykgE Uncharacterized protein YkgE low > 57
Escherichia coli ECRC101 0.31 OKFHMN_06405 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.26 OKFHMN_09105 ykgE Uncharacterized protein YkgE — —
Escherichia coli ECRC101 0.31 MCAODC_25620 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.26 MCAODC_28330 ykgE Uncharacterized protein YkgE — —
Escherichia coli ECRC102 0.31 NIAGMN_04450 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.26 NIAGMN_07170 ykgE Uncharacterized protein YkgE — —
Escherichia coli ECRC99 0.31 KEDOAH_21505 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.26 KEDOAH_18860 ykgE Uncharacterized protein YkgE — —
Escherichia coli ECRC62 0.31 BNILDI_21045 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.26 BNILDI_00045 ykgE Uncharacterized protein YkgE — —
Escherichia coli ECRC98 0.31 JDDGAC_10040 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.26 JDDGAC_12755 ykgE Uncharacterized protein YkgE — —
Shewanella oneidensis MR-1 0.30 SO2741 bioA adenosylmethionine--8-amino-7-oxononanoate aminotransferase (NCBI ptt file) 0.22 SO1520 conserved hypothetical protein (NCBI ptt file) — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.30 Echvi_2790 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.26 Echvi_1569 Fe-S oxidoreductase low > 79
Shewanella sp. ANA-3 0.30 Shewana3_2520 aminotransferase (RefSeq) 0.22 Shewana3_2906 hypothetical protein (RefSeq) — —
Shewanella loihica PV-4 0.28 Shew_1718 adenosylmethionine-8-amino-7-oxononanoate aminotransferase (RefSeq) 0.22 Shew_3004 hypothetical protein (RefSeq) — —
Shewanella amazonensis SB2B 0.28 Sama_1437 adenosylmethionine-8-amino-7-oxononanoate aminotransferase (RefSeq) 0.23 Sama_2441 hypothetical protein (RefSeq) — —

Not shown: 44 genomes with orthologs for Psest_0306 only; 6 genomes with orthologs for Psest_0954 only