| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Marinobacter adhaerens HP15 | 1.0 | HP15_3056 | | high-affinity branched-chain amino acid ABC transporter, permease protein | 1.0 | HP15_860 | | transcriptional regulator, AsnC family protein | 0.45 | 12 |
| Pectobacterium carotovorum WPP14 | 0.67 | HER17_RS00500 | | high-affinity branched-chain amino acid ABC transporter permease LivH | 0.39 | HER17_RS15805 | | Lrp/AsnC family transcriptional regulator | low | > 75 |
| Dickeya dadantii 3937 | 0.67 | DDA3937_RS00665 | | high-affinity branched-chain amino acid ABC transporter permease LivH | 0.43 | DDA3937_RS02090 | | Lrp/AsnC family transcriptional regulator | low | > 74 |
| Dickeya dianthicola 67-19 | 0.67 | HGI48_RS20725 | | high-affinity branched-chain amino acid ABC transporter permease LivH | 0.40 | HGI48_RS10640 | | Lrp/AsnC family transcriptional regulator | low | > 71 |
| Dickeya dianthicola ME23 | 0.67 | DZA65_RS21735 | | high-affinity branched-chain amino acid ABC transporter permease LivH | 0.38 | DZA65_RS06050 | | Lrp/AsnC family transcriptional regulator | low | > 75 |
| Rahnella sp. WP5 | 0.65 | EX31_RS14800 | | high-affinity branched-chain amino acid ABC transporter permease LivH | 0.44 | EX31_RS13415 | | Lrp/AsnC family transcriptional regulator | low | > 89 |
| Cupriavidus basilensis FW507-4G11 | 0.64 | RR42_RS14420 | | branched-chain amino acid transporter permease subunit LivH | 0.44 | RR42_RS19465 | | AsnC family transcriptional regulator | low | > 128 |
| Pantoea sp. MT58 | 0.64 | IAI47_01570 | | high-affinity branched-chain amino acid ABC transporter permease LivH | 0.41 | IAI47_20840 | | Lrp/AsnC family transcriptional regulator | low | > 76 |
| Klebsiella michiganensis M5al | 0.63 | BWI76_RS26345 | | branched-chain amino acid ABC transporter permease LivH | 0.38 | BWI76_RS06580 | | transcriptional regulator | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.63 | PfGW456L13_4608 | | High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) | 0.48 | PfGW456L13_697 | | Transcriptional regulator, AsnC family | low | > 87 |
| Pseudomonas fluorescens SBW25 | 0.63 | PFLU_RS06640 | | high-affinity branched-chain amino acid ABC transporter permease LivH | 0.43 | PFLU_RS20110 | | Lrp/AsnC family transcriptional regulator | low | > 109 |
| Pseudomonas simiae WCS417 | 0.63 | PS417_06610 | | branched-chain amino acid transporter permease subunit LivH | 0.46 | PS417_28420 | | AsnC family transcriptional regulator | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.63 | PFLU_RS06640 | | high-affinity branched-chain amino acid ABC transporter permease LivH | 0.43 | PFLU_RS20110 | | Lrp/AsnC family transcriptional regulator | low | > 109 |
| Enterobacter asburiae PDN3 | 0.63 | EX28DRAFT_4289 | | Branched-chain amino acid ABC-type transport system, permease components | 0.40 | EX28DRAFT_2522 | | Transcriptional regulators | low | > 76 |
| Pseudomonas putida KT2440 | 0.63 | PP_1140 | | branched chain amino acid transporter - permease subunit | 0.43 | PP_4595 | | putative LRP-like transcriptional regulator | low | > 96 |
| Enterobacter sp. TBS_079 | 0.63 | MPMX20_04333 | | High-affinity branched-chain amino acid transport system permease protein LivH | 0.40 | MPMX20_01039 | | DNA-binding transcriptional activator DecR | low | > 85 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.63 | GFF549 | | High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) | 0.39 | GFF4364 | | Putative HTH-type transcriptional regulator ybaO | low | > 78 |
| Pseudomonas fluorescens FW300-N2C3 | 0.63 | AO356_05325 | | branched-chain amino acid transporter permease subunit LivH | 0.50 | AO356_04715 | | AsnC family transcriptional regulator | low | > 104 |
| Escherichia fergusonii Becca | 0.62 | EFB2_00365 | | High-affinity branched-chain amino acid transport system permease protein LivH | 0.40 | EFB2_03610 | | DNA-binding transcriptional activator DecR | low | > 86 |
| Pseudomonas fluorescens FW300-N1B4 | 0.62 | Pf1N1B4_3217 | | High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) | 0.48 | Pf1N1B4_1975 | | Transcriptional regulator, AsnC family | low | > 87 |
| Pseudomonas sp. RS175 | 0.62 | PFR28_00539 | | High-affinity branched-chain amino acid transport system permease protein LivH | 0.42 | PFR28_04311 | | DNA-binding transcriptional activator DecR | low | > 88 |
| Pseudomonas fluorescens FW300-N2E2 | 0.62 | Pf6N2E2_2923 | | ABC transporter for L-leucine/L-phenylalanine/D-alanine, permease component 1 LivH (from data) | 0.50 | Pf6N2E2_2788 | | Transcriptional regulator, AsnC family | low | > 103 |
| Escherichia coli Nissle 1917 | 0.62 | ECOLIN_RS19770 | | high-affinity branched-chain amino acid ABC transporter permease LivH | 0.40 | ECOLIN_RS02680 | | DNA-binding transcriptional regulator DecR | — | — |
| Escherichia coli ECOR38 | 0.62 | HEPCGN_15565 | livH | high-affinity branched-chain amino acid ABC transporter permease LivH | 0.40 | HEPCGN_06895 | decR | DNA-binding transcriptional regulator DecR | low | > 85 |
| Pseudomonas fluorescens FW300-N2E3 | 0.62 | AO353_17120 | | branched-chain amino acid transporter permease subunit LivH | 0.47 | AO353_10195 | | AsnC family transcriptional regulator | low | > 101 |
| Escherichia coli ECRC98 | 0.62 | JDDGAC_20375 | livH | high-affinity branched-chain amino acid ABC transporter permease LivH | 0.40 | JDDGAC_11935 | decR | DNA-binding transcriptional regulator DecR | — | — |
| Escherichia coli ECRC99 | 0.62 | KEDOAH_11395 | livH | high-affinity branched-chain amino acid ABC transporter permease LivH | 0.40 | KEDOAH_19685 | decR | DNA-binding transcriptional regulator DecR | — | — |
| Escherichia coli BL21 | 0.62 | ECD_03306 | | branched-chain amino acid ABC transporter permease | 0.40 | ECD_00399 | | putative DNA-binding transcriptional regulator | low | > 60 |
| Escherichia coli ECRC102 | 0.62 | NIAGMN_14515 | livH | high-affinity branched-chain amino acid ABC transporter permease LivH | 0.40 | NIAGMN_06335 | decR | DNA-binding transcriptional regulator DecR | — | — |
| Escherichia coli ECRC101 | 0.62 | OKFHMN_16745 | livH | high-affinity branched-chain amino acid ABC transporter permease LivH | 0.40 | OKFHMN_08280 | decR | DNA-binding transcriptional regulator DecR | — | — |
| Escherichia coli ECRC62 | 0.62 | BNILDI_02965 | livH | high-affinity branched-chain amino acid ABC transporter permease LivH | 0.40 | BNILDI_22630 | decR | DNA-binding transcriptional regulator DecR | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.62 | OHPLBJKB_00246 | | High-affinity branched-chain amino acid transport system permease protein LivH | 0.40 | OHPLBJKB_03226 | | DNA-binding transcriptional activator DecR | low | > 73 |
| Escherichia coli ECRC101 | 0.62 | MCAODC_07275 | livH | high-affinity branched-chain amino acid ABC transporter permease LivH | 0.40 | MCAODC_27505 | decR | DNA-binding transcriptional regulator DecR | — | — |
| Escherichia coli BW25113 | 0.62 | b3457 | livH | leucine/isoleucine/valine transporter subunit (NCBI) | 0.40 | b0447 | ybaO | putative LRP-like transcriptional regulator (VIMSS) | low | > 76 |
| Escherichia coli ECOR27 | 0.62 | NOLOHH_08540 | livH | high-affinity branched-chain amino acid ABC transporter permease LivH | 0.40 | NOLOHH_01215 | decR | DNA-binding transcriptional regulator DecR | low | > 57 |
| Pseudomonas syringae pv. syringae B728a | 0.62 | Psyr_3846 | | L-valine ABC transporter membrane protein / L-isoleucine ABC transporter membrane protein / L-leucine ABC transporter membrane protein | 0.44 | Psyr_0251 | | transcriptional regulator, AsnC family | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.62 | Psyr_3846 | | L-valine ABC transporter membrane protein / L-isoleucine ABC transporter membrane protein / L-leucine ABC transporter membrane protein | 0.44 | Psyr_0251 | | transcriptional regulator, AsnC family | low | > 86 |
| Pseudomonas sp. S08-1 | 0.61 | OH686_04610 | | Branched-chain amino acid ABC transporter, permease protein LivH | 0.41 | OH686_05175 | | Transcriptional regulator, AsnC family | low | > 80 |
| Castellaniella sp019104865 MT123 | 0.60 | ABCV34_RS03620 | | branched-chain amino acid ABC transporter permease LivH | 0.42 | ABCV34_RS09770 | | Lrp/AsnC family transcriptional regulator | low | > 48 |
| Azospirillum sp. SherDot2 | 0.58 | MPMX19_06002 | | High-affinity branched-chain amino acid transport system permease protein LivH | 0.49 | MPMX19_05653 | | Leucine-responsive regulatory protein | — | — |
| Rhodospirillum rubrum S1H | 0.57 | Rru_A1751 | | inner-membrane translocator (NCBI) | 0.45 | Rru_A3070 | | Transcriptional Regulator, AsnC family (NCBI) | low | > 58 |
| Variovorax sp. OAS795 | 0.55 | ABID97_RS27580 | | branched-chain amino acid ABC transporter permease LivH | 0.40 | ABID97_RS25355 | | Lrp/AsnC family transcriptional regulator | low | > 91 |
| Rhodopseudomonas palustris CGA009 | 0.53 | TX73_019710 | | branched-chain amino acid ABC transporter permease | 0.38 | TX73_001935 | | Lrp/AsnC family transcriptional regulator | low | > 86 |
| Sinorhizobium meliloti 1021 | 0.52 | SMc01951 | | high-affinity branched-chain amino acid ABC transporter permease | 0.43 | SM_b20021 | | transcriptional regulator | low | > 103 |
| Agrobacterium fabrum C58 | 0.51 | Atu2427 | | ABC transporter, membrane spanning protein | 0.40 | Atu4818 | | AsnC family transcriptional regulator | low | > 89 |
| Rhizobium sp. OAE497 | 0.49 | ABIE40_RS14715 | | branched-chain amino acid ABC transporter permease LivH | 0.39 | ABIE40_RS02530 | | Lrp/AsnC family transcriptional regulator | low | > 107 |
| Bosea sp. OAE506 | 0.48 | ABIE41_RS13635 | | branched-chain amino acid ABC transporter permease LivH | 0.45 | ABIE41_RS21665 | | Lrp/AsnC family transcriptional regulator | low | > 77 |
| Paraburkholderia sabiae LMG 24235 | 0.41 | QEN71_RS03105 | | branched-chain amino acid ABC transporter permease | 0.45 | QEN71_RS00635 | | Lrp/AsnC family transcriptional regulator | low | > 153 |
| Burkholderia phytofirmans PsJN | 0.39 | BPHYT_RS31740 | | ABC transporter permease | 0.46 | BPHYT_RS01920 | | AsnC family transcriptional regulator | low | > 109 |
| Paraburkholderia graminis OAS925 | 0.39 | ABIE53_003285 | | branched-chain amino acid transport system permease protein | 0.47 | ABIE53_000466 | | Lrp/AsnC family leucine-responsive transcriptional regulator | low | > 113 |
| Ralstonia solanacearum GMI1000 | 0.39 | RS_RS12250 | | branched-chain amino acid ABC transporter permease | 0.45 | RS_RS15580 | | Lrp/AsnC family transcriptional regulator | low | > 80 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.39 | H281DRAFT_04062 | | amino acid/amide ABC transporter membrane protein 1, HAAT family | 0.46 | H281DRAFT_02156 | | transcriptional regulator, AsnC family | low | > 103 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.39 | GFF778 | | High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) | 0.41 | GFF2564 | | Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.39 | RALBFv3_RS04690 | | branched-chain amino acid ABC transporter permease | 0.45 | RALBFv3_RS07680 | | Lrp/AsnC family transcriptional regulator | low | > 76 |
| Ralstonia solanacearum UW163 | 0.39 | UW163_RS08980 | | branched-chain amino acid ABC transporter permease | 0.45 | UW163_RS05945 | | Lrp/AsnC family transcriptional regulator | — | — |
| Variovorax sp. SCN45 | 0.39 | GFF6033 | | Branched-chain amino acid ABC transporter, permease protein LivH (TC 3.A.1.4.1) | 0.47 | GFF3150 | | Transcriptional regulator, AsnC family | low | > 127 |
| Ralstonia solanacearum PSI07 | 0.38 | RPSI07_RS12695 | | branched-chain amino acid ABC transporter permease | 0.45 | RPSI07_RS09580 | | Lrp/AsnC family transcriptional regulator | low | > 81 |
| Acidovorax sp. GW101-3H11 | 0.38 | Ac3H11_1695 | | ABC transporter for glutamine/isoleucine/leucine/phenylalanine/proline/serine/tyrosine, permease component 1 (from data) | 0.43 | Ac3H11_33 | | Transcriptional regulator, AsnC family | low | > 79 |
| Ralstonia sp. UNC404CL21Col | 0.36 | ABZR87_RS00310 | | branched-chain amino acid ABC transporter permease | 0.45 | ABZR87_RS03390 | | Lrp/AsnC family transcriptional regulator | low | > 80 |
Not shown: 12 genomes with orthologs for HP15_3056 only; 18 genomes with orthologs for HP15_860 only