Conservation of cofitness between PS417_23375 and PS417_04270 in Pseudomonas simiae WCS417

56 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_23375 cytochrome C oxidase 1.0 PS417_04270 ribonuclease G 0.36 15
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS25205 cytochrome o ubiquinol oxidase subunit IV 1.00 PFLU_RS04325 ribonuclease G low > 109
Pseudomonas fluorescens SBW25 1.00 PFLU_RS25205 cytochrome o ubiquinol oxidase subunit IV 1.00 PFLU_RS04325 ribonuclease G low > 109
Pseudomonas fluorescens FW300-N1B4 0.88 Pf1N1B4_970 Cytochrome O ubiquinol oxidase subunit IV (EC 1.10.3.-) 0.98 Pf1N1B4_1095 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) 0.41 56
Pseudomonas fluorescens FW300-N2E2 0.82 Pf6N2E2_5320 Cytochrome O ubiquinol oxidase subunit IV (EC 1.10.3.-) 0.95 Pf6N2E2_3283 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) 0.28 19
Pseudomonas fluorescens FW300-N2C3 0.82 AO356_16975 cytochrome C oxidase 0.96 AO356_07110 ribonuclease G low > 104
Pseudomonas sp. RS175 0.82 PFR28_00245 Cytochrome bo(3) ubiquinol oxidase subunit 4 0.95 PFR28_00158 Ribonuclease G low > 88
Pseudomonas fluorescens GW456-L13 0.80 PfGW456L13_4933 Cytochrome O ubiquinol oxidase subunit IV (EC 1.10.3.-) 0.99 PfGW456L13_5029 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) low > 87
Pseudomonas fluorescens FW300-N2E3 0.74 AO353_15465 cytochrome C oxidase 0.96 AO353_05230 ribonuclease G 0.35 46
Pseudomonas putida KT2440 0.68 PP_0815 cytochrome bo terminal oxidase subunit IV 0.92 PP_0937 endoribonuclease G (RNAse G) — —
Pseudomonas syringae pv. syringae B728a 0.65 Psyr_1144 cytochrome bo3 quinol oxidase subunit 4 0.94 Psyr_4159 RNAse G — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.65 Psyr_1144 cytochrome bo3 quinol oxidase subunit 4 0.94 Psyr_4159 RNAse G — —
Cupriavidus basilensis FW507-4G11 0.55 RR42_RS32585 cytochrome C oxidase 0.55 RR42_RS04700 ribonuclease G low > 128
Dickeya dianthicola ME23 0.53 DZA65_RS05970 cytochrome o ubiquinol oxidase subunit IV 0.57 DZA65_RS01430 ribonuclease G — —
Dickeya dadantii 3937 0.53 DDA3937_RS05600 cytochrome o ubiquinol oxidase subunit IV 0.57 DDA3937_RS01450 ribonuclease G — —
Dickeya dianthicola 67-19 0.53 HGI48_RS05645 cytochrome o ubiquinol oxidase subunit IV 0.57 HGI48_RS01370 ribonuclease G — —
Pectobacterium carotovorum WPP14 0.52 HER17_RS15890 cytochrome o ubiquinol oxidase subunit IV 0.57 HER17_RS20150 ribonuclease G low > 75
Serratia liquefaciens MT49 0.49 IAI46_04970 cytochrome o ubiquinol oxidase subunit IV 0.57 IAI46_22700 ribonuclease G low > 86
Rahnella sp. WP5 0.49 EX31_RS22205 cytochrome o ubiquinol oxidase subunit IV 0.57 EX31_RS12255 ribonuclease G low > 89
Pantoea sp. MT58 0.49 IAI47_14695 cytochrome o ubiquinol oxidase subunit IV 0.55 IAI47_02455 ribonuclease G low > 76
Shewanella loihica PV-4 0.48 Shew_0369 cytochrome C oxidase subunit IV (RefSeq) 0.56 Shew_0407 ribonuclease G (RefSeq) low > 60
Acinetobacter radioresistens SK82 0.48 MPMX26_01159 Cytochrome bo(3) ubiquinol oxidase subunit 4 0.57 MPMX26_00646 Ribonuclease G low > 36
Shewanella sp. ANA-3 0.47 Shewana3_4034 cytochrome C oxidase subunit IV (RefSeq) 0.57 Shewana3_3644 ribonuclease G (RefSeq) low > 73
Erwinia tracheiphila SCR3 0.47 LU632_RS18390 cytochrome o ubiquinol oxidase subunit IV 0.56 LU632_RS21430 rng ribonuclease G — —
Escherichia fergusonii Becca 0.47 EFB2_03628 Cytochrome bo(3) ubiquinol oxidase subunit 4 0.57 EFB2_00584 Ribonuclease G low > 86
Escherichia coli ECRC62 0.46 BNILDI_22725 cyoD cytochrome o ubiquinol oxidase subunit III 0.57 BNILDI_01990 rng ribonuclease G — —
Escherichia coli ECRC101 0.46 OKFHMN_08375 cyoD cytochrome o ubiquinol oxidase subunit III 0.57 OKFHMN_17745 rng ribonuclease G — —
Escherichia coli ECOR27 0.46 NOLOHH_01310 cyoD cytochrome o ubiquinol oxidase subunit III 0.57 NOLOHH_09530 rng ribonuclease G low > 57
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.46 GFF4343 Cytochrome O ubiquinol oxidase subunit IV (EC 1.10.3.-) 0.57 GFF2138 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) low > 78
Escherichia coli BW25113 0.46 b0429 cyoD cytochrome o ubiquinol oxidase subunit IV (NCBI) 0.57 b3247 cafA bundles of cytoplasmic filaments (VIMSS) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.46 OHPLBJKB_03244 Cytochrome bo(3) ubiquinol oxidase subunit 4 0.57 OHPLBJKB_00458 Ribonuclease G low > 73
Escherichia coli ECRC102 0.46 NIAGMN_06430 cyoD cytochrome o ubiquinol oxidase subunit III 0.57 NIAGMN_15505 rng ribonuclease G — —
Escherichia coli BL21 0.46 ECD_00380 cytochrome o ubiquinol oxidase subunit IV 0.57 ECD_03106 ribonuclease G low > 60
Escherichia coli ECRC99 0.46 KEDOAH_19590 cyoD cytochrome o ubiquinol oxidase subunit III 0.57 KEDOAH_10405 rng ribonuclease G — —
Escherichia coli ECRC98 0.46 JDDGAC_12030 cyoD cytochrome o ubiquinol oxidase subunit III 0.57 JDDGAC_21370 rng ribonuclease G — —
Escherichia coli ECOR38 0.46 HEPCGN_06990 cyoD cytochrome o ubiquinol oxidase subunit III 0.57 HEPCGN_16610 rng ribonuclease G low > 85
Escherichia coli ECRC101 0.46 MCAODC_27600 cyoD cytochrome o ubiquinol oxidase subunit III 0.57 MCAODC_08265 rng ribonuclease G — —
Escherichia coli Nissle 1917 0.46 ECOLIN_RS02580 cytochrome o ubiquinol oxidase subunit IV 0.57 ECOLIN_RS18605 ribonuclease G low > 52
Alteromonas macleodii MIT1002 0.46 MIT1002_03926 Cytochrome o ubiquinol oxidase protein CyoD 0.60 MIT1002_00224 Ribonuclease G low > 70
Xanthomonas campestris pv. campestris strain 8004 0.45 Xcc-8004.3814.1 Cytochrome O ubiquinol oxidase subunit IV (EC 1.10.3.-) 0.59 Xcc-8004.1880.1 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) — —
Enterobacter sp. TBS_079 0.45 MPMX20_01020 Cytochrome bo(3) ubiquinol oxidase subunit 4 0.57 MPMX20_04153 Ribonuclease G low > 85
Enterobacter asburiae PDN3 0.45 EX28DRAFT_2542 cytochrome o ubiquinol oxidase subunit IV 0.57 EX28DRAFT_3297 ribonuclease, Rne/Rng family — —
Ralstonia sp. UNC404CL21Col 0.45 ABZR87_RS02320 cytochrome o ubiquinol oxidase subunit IV 0.55 ABZR87_RS15440 ribonuclease G low > 80
Ralstonia solanacearum GMI1000 0.45 RS_RS14595 cytochrome o ubiquinol oxidase subunit IV 0.55 RS_RS11025 ribonuclease G — —
Burkholderia phytofirmans PsJN 0.44 BPHYT_RS24930 cytochrome C oxidase subunit III 0.59 BPHYT_RS06375 ribonuclease low > 109
Paraburkholderia sabiae LMG 24235 0.44 QEN71_RS36885 cytochrome o ubiquinol oxidase subunit IV 0.59 QEN71_RS24430 ribonuclease G — —
Klebsiella michiganensis M5al 0.43 BWI76_RS06480 cytochrome o ubiquinol oxidase subunit IV 0.57 BWI76_RS25480 ribonuclease E/G — —
Ralstonia solanacearum UW163 0.40 UW163_RS06980 cytochrome o ubiquinol oxidase subunit IV 0.55 UW163_RS10095 ribonuclease G — —
Ralstonia solanacearum IBSBF1503 0.40 RALBFv3_RS06645 cytochrome o ubiquinol oxidase subunit IV 0.55 RALBFv3_RS03575 ribonuclease G — —
Variovorax sp. SCN45 0.39 GFF5675 Cytochrome O ubiquinol oxidase subunit IV (EC 1.10.3.-) 0.53 GFF295 Ribonuclease G low > 127
Paraburkholderia bryophila 376MFSha3.1 0.39 H281DRAFT_03429 cytochrome bo3 quinol oxidase subunit 4 (EC 1.10.3.-) 0.59 H281DRAFT_04515 RNAse G low > 103
Ralstonia solanacearum PSI07 0.38 RPSI07_RS10580 cytochrome o ubiquinol oxidase subunit IV 0.55 RPSI07_RS13650 ribonuclease G — —
Dyella japonica UNC79MFTsu3.2 0.37 ABZR86_RS07610 cytochrome o ubiquinol oxidase subunit IV 0.58 ABZR86_RS21730 ribonuclease G low > 74
Variovorax sp. OAS795 0.36 ABID97_RS07625 cytochrome o ubiquinol oxidase subunit IV 0.53 ABID97_RS16705 ribonuclease G low > 91
Lysobacter sp. OAE881 0.35 ABIE51_RS09780 cytochrome o ubiquinol oxidase subunit IV 0.59 ABIE51_RS06785 ribonuclease G low > 62
Paraburkholderia graminis OAS925 0.35 ABIE53_005343 cytochrome o ubiquinol oxidase operon protein cyoD 0.59 ABIE53_001538 ribonuclease G — —
Acidovorax sp. GW101-3H11 0.35 Ac3H11_3144 Cytochrome O ubiquinol oxidase subunit IV (EC 1.10.3.-) 0.53 Ac3H11_2416 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) — —

Not shown: 8 genomes with orthologs for PS417_23375 only; 16 genomes with orthologs for PS417_04270 only