Conservation of cofitness between GFF1973 and GFF5759 in Hydrogenophaga sp. GW460-11-11-14-LB1

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF1973 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) 1.0 GFF5759 Glutaryl-CoA dehydrogenase (EC 1.3.99.7) 0.77 7
Acidovorax sp. GW101-3H11 0.72 Ac3H11_4848 D-alanine dehydrogenase (EC 1.4.99.-) (from data) 0.83 Ac3H11_3533 Glutaryl-CoA dehydrogenase (EC 1.3.99.7) low > 79
Marinobacter adhaerens HP15 0.46 HP15_2610 D-amino acid dehydrogenase small subunit 0.66 HP15_3936 acyl-CoA dehydrogenase domain protein low > 73
Variovorax sp. SCN45 0.45 GFF6883 D-amino acid dehydrogenase (EC 1.4.99.6) 0.86 GFF3431 Glutaryl-CoA dehydrogenase (EC 1.3.8.6) low > 127
Variovorax sp. OAS795 0.45 ABID97_RS05655 D-amino acid dehydrogenase 0.86 ABID97_RS03205 acyl-CoA dehydrogenase low > 91
Dechlorosoma suillum PS 0.43 Dsui_0501 glycine/D-amino acid oxidase, deaminating 0.76 Dsui_3369 acyl-CoA dehydrogenase — —
Castellaniella sp019104865 MT123 0.41 ABCV34_RS06160 D-amino acid dehydrogenase 0.83 ABCV34_RS01795 acyl-CoA dehydrogenase low > 48
Azospirillum sp. SherDot2 0.38 MPMX19_06097 D-amino acid dehydrogenase 1 0.70 MPMX19_05494 Acyl-CoA dehydrogenase low > 112
Azospirillum brasilense Sp245 0.38 AZOBR_RS08020 D-alanine dehydrogenase (EC 1.4.99.-) (from data) 0.72 AZOBR_RS19670 acyl-CoA dehydrogenase low > 97
Ralstonia sp. UNC404CL21Col 0.36 ABZR87_RS09560 D-amino acid dehydrogenase 0.85 ABZR87_RS09100 acyl-CoA dehydrogenase low > 80
Rhodanobacter sp. FW510-T8 0.36 OKGIIK_06665 dadA D-amino acid dehydrogenase small subunit 0.46 OKGIIK_09135 caiA acyl-CoA dehydrogenase low > 52
Ralstonia solanacearum IBSBF1503 0.36 RALBFv3_RS13870 D-amino acid dehydrogenase small subunit 0.84 RALBFv3_RS13025 acyl-CoA dehydrogenase low > 76
Ralstonia solanacearum UW163 0.36 UW163_RS15940 D-amino acid dehydrogenase small subunit 0.84 UW163_RS00540 acyl-CoA dehydrogenase — —
Agrobacterium fabrum C58 0.36 Atu3293 D-amino acid dehydrogenase small subunit 0.67 Atu4418 glutaryl-CoA dehydrogenase low > 89
Rhodanobacter denitrificans MT42 0.36 LRK55_RS00360 D-amino acid dehydrogenase 0.46 LRK55_RS01845 acyl-CoA dehydrogenase family protein low > 63
Ralstonia solanacearum PSI07 0.36 RPSI07_RS19600 D-amino acid dehydrogenase small subunit 0.84 RPSI07_RS20200 acyl-CoA dehydrogenase low > 81
Rhodanobacter denitrificans FW104-10B01 0.36 LRK54_RS00590 D-amino acid dehydrogenase 0.46 LRK54_RS02070 acyl-CoA dehydrogenase family protein low > 59
Ralstonia solanacearum GMI1000 0.36 RS_RS04605 D-amino acid dehydrogenase small subunit 0.85 RS_RS03810 acyl-CoA dehydrogenase low > 80
Acinetobacter radioresistens SK82 0.35 MPMX26_01248 D-amino acid dehydrogenase 0.82 MPMX26_01268 Acyl-CoA dehydrogenase — —
Pseudomonas fluorescens GW456-L13 0.35 PfGW456L13_812 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) 0.85 PfGW456L13_554 Glutaryl-CoA dehydrogenase (EC 1.3.99.7) low > 87
Pseudomonas simiae WCS417 0.35 PS417_27705 amino acid dehydrogenase 0.85 PS417_00580 acyl-CoA dehydrogenase low > 88
Pseudomonas fluorescens FW300-N1B4 0.35 Pf1N1B4_2144 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) 0.85 Pf1N1B4_1816 Glutaryl-CoA dehydrogenase (EC 1.3.99.7) low > 87
Rhodospirillum rubrum S1H 0.35 Rru_A1546 FAD dependent oxidoreductase (NCBI) 0.67 Rru_A2005 Glutaryl-CoA dehydrogenase (NCBI) — —
Pseudomonas putida KT2440 0.35 PP_4434 D-amino acid dehydrogenase 1 small subunit 0.86 PP_0158 glutaryl-CoA dehydrogenase low > 96
Magnetospirillum magneticum AMB-1 0.34 AMB_RS14080 D-amino-acid dehydrogenase 0.71 AMB_RS16315 acyl-CoA dehydrogenase — —
Pseudomonas sp. RS175 0.34 PFR28_04399 D-amino acid dehydrogenase 1 0.86 PFR28_04728 Acyl-CoA dehydrogenase low > 88
Pseudomonas fluorescens SBW25-INTG 0.34 PFLU_RS29380 D-amino acid dehydrogenase 0.85 PFLU_RS00565 acyl-CoA dehydrogenase low > 109
Pseudomonas fluorescens FW300-N2C3 0.34 AO356_12620 amino acid dehydrogenase 0.86 AO356_10850 acyl-CoA dehydrogenase low > 104
Pseudomonas fluorescens SBW25 0.34 PFLU_RS29380 D-amino acid dehydrogenase 0.85 PFLU_RS00565 acyl-CoA dehydrogenase low > 109
Pseudomonas fluorescens FW300-N2E2 0.34 Pf6N2E2_4391 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) 0.86 Pf6N2E2_4036 Glutaryl-CoA dehydrogenase (EC 1.3.99.7) low > 103
Pseudomonas fluorescens FW300-N2E3 0.34 AO353_09155 amino acid dehydrogenase 0.85 AO353_11100 acyl-CoA dehydrogenase low > 101
Pseudomonas syringae pv. syringae B728a 0.34 Psyr_0235 D-amino acid dehydrogenase small subunit 0.85 Psyr_5014 Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.34 Psyr_0235 D-amino acid dehydrogenase small subunit 0.85 Psyr_5014 Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal low > 86
Xanthomonas campestris pv. campestris strain 8004 0.34 Xcc-8004.4621.1 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) 0.46 Xcc-8004.3490.1 Glutaryl-CoA dehydrogenase (EC 1.3.99.7) low > 74
Cupriavidus basilensis FW507-4G11 0.34 RR42_RS04585 amino acid dehydrogenase 0.84 RR42_RS15400 acyl-CoA dehydrogenase 0.29 17
Pseudomonas sp. S08-1 0.34 OH686_13685 D-amino acid dehydrogenase 0.85 OH686_11700 Glutaryl-CoA dehydrogenase low > 80
Paraburkholderia bryophila 376MFSha3.1 0.33 H281DRAFT_04287 D-amino-acid dehydrogenase 0.86 H281DRAFT_04737 glutaryl-CoA dehydrogenase low > 103
Paraburkholderia graminis OAS925 0.33 ABIE53_003133 D-amino-acid dehydrogenase 0.86 ABIE53_000899 glutaryl-CoA dehydrogenase 0.26 25
Pseudomonas stutzeri RCH2 0.33 Psest_3793 D-alanine dehydrogenase (EC 1.4.99.-) (from data) 0.85 Psest_3830 Acyl-CoA dehydrogenases low > 67
Paraburkholderia sabiae LMG 24235 0.33 QEN71_RS04190 D-amino acid dehydrogenase 0.85 QEN71_RS26180 acyl-CoA dehydrogenase low > 153
Burkholderia phytofirmans PsJN 0.33 BPHYT_RS17845 amino acid dehydrogenase 0.86 BPHYT_RS03780 acyl-CoA dehydrogenase low > 109
Dinoroseobacter shibae DFL-12 0.33 Dshi_0558 D-amino-acid dehydrogenase (RefSeq) 0.65 Dshi_2357 acyl-CoA dehydrogenase domain protein (RefSeq) low > 64

Not shown: 28 genomes with orthologs for GFF1973 only; 16 genomes with orthologs for GFF5759 only