Conservation of cofitness between PS417_17530 and PS417_27535 in Pseudomonas simiae WCS417

50 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_17530 ArsR family transcriptional regulator 1.0 PS417_27535 chemotaxis protein CheY 0.23 4
Pseudomonas fluorescens FW300-N2E3 0.96 AO353_26620 ArsR family transcriptional regulator 0.88 AO353_08995 chemotaxis protein CheY low > 101
Pseudomonas fluorescens FW300-N1B4 0.93 Pf1N1B4_4483 Transcriptional regulator, ArsR family 0.87 Pf1N1B4_2184 Autolysis response regulater LytR low > 87
Pseudomonas fluorescens GW456-L13 0.93 PfGW456L13_3537 Transcriptional regulator, ArsR family 0.86 PfGW456L13_855 Autolysis response regulater LytR low > 87
Ralstonia sp. UNC404CL21Col 0.75 ABZR87_RS14035 metalloregulator ArsR/SmtB family transcription factor 0.21 ABZR87_RS11570 LytTR family DNA-binding domain-containing protein low > 80
Ralstonia solanacearum GMI1000 0.70 RS_RS07745 transcriptional regulator 0.21 RS_RS06780 DNA-binding response regulator low > 80
Ralstonia solanacearum PSI07 0.68 RPSI07_RS15365 ArsR family transcriptional regulator 0.22 RPSI07_RS17365 DNA-binding response regulator low > 81
Ralstonia solanacearum UW163 0.68 UW163_RS15385 transcriptional regulator 0.22 UW163_RS13450 DNA-binding response regulator
Ralstonia solanacearum IBSBF1503 0.68 RALBFv3_RS02060 transcriptional regulator 0.22 RALBFv3_RS00120 DNA-binding response regulator low > 76
Hydrogenophaga sp. GW460-11-11-14-LB1 0.57 GFF3249 Transcriptional regulator, ArsR family 0.25 GFF738 Autolysis response regulater LytR low > 90
Pseudomonas stutzeri RCH2 0.57 Psest_1782 Predicted transcriptional regulators 0.80 Psest_3749 Response regulator of the LytR/AlgR family low > 67
Acidovorax sp. GW101-3H11 0.56 Ac3H11_2264 Transcriptional regulator, ArsR family 0.26 Ac3H11_1634 Response regulator receiver:LytTr DNA-binding region low > 79
Variovorax sp. SCN45 0.50 GFF6927 Transcriptional regulator, ArsR family 0.22 GFF3826 Response regulator receiver:LytTr DNA-binding region low > 127
Serratia liquefaciens MT49 0.50 IAI46_09640 winged helix-turn-helix transcriptional regulator 0.18 IAI46_23615 two-component system response regulator BtsR low > 86
Cupriavidus basilensis FW507-4G11 0.49 RR42_RS35445 ArsR family transcriptional regulator 0.20 RR42_RS12225 LytR family transcriptional regulator low > 128
Acinetobacter radioresistens SK82 0.48 MPMX26_01494 Biofilm growth-associated repressor 0.42 MPMX26_00187 Transcriptional regulatory protein YpdB low > 36
Dickeya dadantii 3937 0.47 DDA3937_RS20270 helix-turn-helix transcriptional regulator 0.19 DDA3937_RS16365 two-component system response regulator BtsR low > 74
Dickeya dianthicola 67-19 0.46 HGI48_RS00955 helix-turn-helix transcriptional regulator 0.18 HGI48_RS16465 two-component system response regulator BtsR low > 71
Dickeya dianthicola ME23 0.46 DZA65_RS01015 helix-turn-helix transcriptional regulator 0.18 DZA65_RS17550 two-component system response regulator BtsR low > 75
Rhodospirillum rubrum S1H 0.44 Rru_A2308 Transcriptional Regulator, ArsR family (NCBI) 0.15 Rru_A0376 Transcriptional Regulator, LytR/AlgR family (NCBI) low > 58
Azospirillum brasilense Sp245 0.44 AZOBR_RS20775 ArsR family transcriptional regulator 0.15 AZOBR_RS22560 transcriptional regulator
Shewanella amazonensis SB2B 0.39 Sama_0920 transcriptional regulator HlyU (RefSeq) 0.15 Sama_1281 putative two-component response-regulatory protein YehT (RefSeq) low > 62
Herbaspirillum seropedicae SmR1 0.38 HSERO_RS11595 ArsR family transcriptional regulator 0.20 HSERO_RS18060 LytR family transcriptional regulator low > 78
Shewanella loihica PV-4 0.37 Shew_1095 ArsR family transcriptional regulator (RefSeq) 0.14 Shew_2329 putative two-component response-regulatory protein YehT (RefSeq) low > 60
Vibrio cholerae E7946 ATCC 55056 0.37 CSW01_03555 transcriptional regulator 0.22 CSW01_18385 DNA-binding response regulator low > 62
Rhodanobacter denitrificans FW104-10B01 0.37 LRK54_RS07735 metalloregulator ArsR/SmtB family transcription factor 0.26 LRK54_RS07945 LytTR family DNA-binding domain-containing protein low > 59
Shewanella oneidensis MR-1 0.36 SO3538 hlyU transcriptional regulator HlyU (NCBI ptt file) 0.18 SO2823 response regulator (NCBI ptt file) low > 76
Rhodanobacter denitrificans MT42 0.36 LRK55_RS07465 metalloregulator ArsR/SmtB family transcription factor 0.26 LRK55_RS07675 LytTR family DNA-binding domain-containing protein low > 63
Shewanella sp. ANA-3 0.36 Shewana3_3141 ArsR family transcriptional regulator (RefSeq) 0.19 Shewana3_2594 putative two-component response-regulatory protein YehT (RefSeq) low > 73
Kangiella aquimarina DSM 16071 0.36 B158DRAFT_0345 transcriptional regulator, ArsR family 0.26 B158DRAFT_0251 two component transcriptional regulator, LytTR family
Escherichia coli BL21 0.35 ECD_02523 tributyltin-inducible repressor of ygaVP 0.16 ECD_02054 putative response regulator in two-component system withYehU low > 61
Escherichia coli ECOR38 0.35 HEPCGN_20180 ygaV putative HTH-type transcriptional regulator YgaV 0.16 HEPCGN_02640 btsR two-component system response regulator BtsR low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.35 OHPLBJKB_01065 putative HTH-type transcriptional regulator YgaV 0.16 OHPLBJKB_01586 Transcriptional regulatory protein BtsR low > 73
Escherichia coli ECRC62 0.35 BNILDI_11270 ygaV putative HTH-type transcriptional regulator YgaV 0.16 BNILDI_14185 btsR two-component system response regulator BtsR low > 75
Escherichia coli BW25113 0.35 b2667 ygaV predicted DNA-binding transcriptional regulator (NCBI) 0.16 b2125 yehT orf, hypothetical protein (VIMSS) low > 76
Escherichia coli ECOR27 0.35 NOLOHH_12710 ygaV putative HTH-type transcriptional regulator YgaV 0.16 NOLOHH_15235 btsR two-component system response regulator BtsR low > 75
Escherichia fergusonii Becca 0.35 EFB2_01263 putative HTH-type transcriptional regulator YgaV 0.16 EFB2_01731 Transcriptional regulatory protein BtsR low > 86
Escherichia coli ECRC102 0.34 NIAGMN_18650 ygaV putative HTH-type transcriptional regulator YgaV 0.16 NIAGMN_21850 btsR two-component system response regulator BtsR
Escherichia coli ECRC99 0.34 KEDOAH_07255 ygaV putative HTH-type transcriptional regulator YgaV 0.16 KEDOAH_04250 btsR two-component system response regulator BtsR
Escherichia coli ECRC100 0.34 OKFHMN_20885 ygaV putative HTH-type transcriptional regulator YgaV 0.16 OKFHMN_23915 btsR two-component system response regulator BtsR low > 80
Escherichia coli ECRC101 0.34 MCAODC_11405 ygaV putative HTH-type transcriptional regulator YgaV 0.16 MCAODC_21245 btsR two-component system response regulator BtsR low > 87
Escherichia coli ECRC98 0.34 JDDGAC_24545 ygaV putative HTH-type transcriptional regulator YgaV 0.16 JDDGAC_28005 btsR two-component system response regulator BtsR low > 86
Enterobacter sp. TBS_079 0.33 MPMX20_03547 putative HTH-type transcriptional regulator YgaV 0.17 MPMX20_03092 Transcriptional regulatory protein BtsR low > 85
Enterobacter asburiae PDN3 0.33 EX28DRAFT_2752 Predicted transcriptional regulators 0.16 EX28DRAFT_0437 two component transcriptional regulator, LytTR family low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.33 GFF1572 Transcriptional regulator, ArsR family 0.16 GFF3820 Two-component response-regulatory protein YehT low > 78
Escherichia coli Nissle 1917 0.33 ECOLIN_RS14870 metalloregulator ArsR/SmtB family transcription factor 0.16 ECOLIN_RS12450 two-component system response regulator BtsR
Klebsiella michiganensis M5al 0.32 BWI76_RS21995 transcriptional regulator 0.16 BWI76_RS19470 DNA-binding response regulator low > 92
Sphingomonas koreensis DSMZ 15582 0.31 Ga0059261_0944 Predicted transcriptional regulators 0.20 Ga0059261_0044 two component transcriptional regulator, LytTR family
Pectobacterium carotovorum WPP14 0.31 HER17_RS03345 metalloregulator ArsR/SmtB family transcription factor 0.16 HER17_RS05370 two-component system response regulator BtsR low > 75
Pantoea sp. MT58 0.27 IAI47_19710 helix-turn-helix transcriptional regulator 0.14 IAI47_05560 response regulator transcription factor low > 76
Rahnella sp. WP5 0.25 EX31_RS21725 helix-turn-helix transcriptional regulator 0.16 EX31_RS00780 two-component system response regulator BtsR low > 89

Not shown: 8 genomes with orthologs for PS417_17530 only; 31 genomes with orthologs for PS417_27535 only