Conservation of cofitness between PS417_12695 and PS417_27535 in Pseudomonas simiae WCS417

55 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_12695 mannitol dehydrogenase 1.0 PS417_27535 chemotaxis protein CheY 0.36 8
Pseudomonas fluorescens SBW25-INTG 0.92 PFLU_RS13385 mannitol dehydrogenase family protein 0.99 PFLU_RS29215 response regulator transcription factor 0.16 76
Pseudomonas fluorescens SBW25 0.92 PFLU_RS13385 mannitol dehydrogenase family protein 0.99 PFLU_RS29215 response regulator transcription factor low > 109
Pseudomonas fluorescens FW300-N2E3 0.85 AO353_25900 mannitol dehydrogenase 0.88 AO353_08995 chemotaxis protein CheY 0.38 5
Pseudomonas fluorescens FW300-N2E2 0.84 Pf6N2E2_806 Multiple polyol-specific dehydrogenase (EC 1.1.1.-) 0.86 Pf6N2E2_4430 Autolysis response regulater LytR low > 103
Pseudomonas fluorescens FW300-N2C3 0.84 AO356_27690 mannitol dehydrogenase 0.86 AO356_12785 chemotaxis protein CheY low > 104
Pseudomonas sp. RS175 0.83 PFR28_01709 Polyol:NADP oxidoreductase 0.86 PFR28_04366 Sensory transduction protein LytR low > 88
Pseudomonas fluorescens FW300-N1B4 0.83 Pf1N1B4_4846 Multiple polyol-specific dehydrogenase (EC 1.1.1.-) 0.87 Pf1N1B4_2184 Autolysis response regulater LytR low > 87
Pseudomonas fluorescens GW456-L13 0.81 PfGW456L13_3038 mannitol 2-dehydrogenase (EC 1.1.1.67) (from data) 0.86 PfGW456L13_855 Autolysis response regulater LytR 0.23 47
Pseudomonas syringae pv. syringae B728a ΔmexB 0.80 Psyr_2436 Mannitol dehydrogenase 0.85 Psyr_0063 Two-component response regulator AlgR low > 86
Pseudomonas syringae pv. syringae B728a 0.80 Psyr_2436 Mannitol dehydrogenase 0.85 Psyr_0063 Two-component response regulator AlgR low > 86
Bacteroides ovatus ATCC 8483 0.38 BACOVA_03131 mannitol dehydrogenase domain protein 0.16 BACOVA_02521 response regulator receiver domain protein low > 94
Azospirillum sp. SherDot2 0.38 MPMX19_03653 Mannitol 2-dehydrogenase 0.15 MPMX19_06239 Transcriptional regulatory protein BtsR low > 112
Azospirillum brasilense Sp245 0.38 AZOBR_RS31375 dioxygenase 0.15 AZOBR_RS22560 transcriptional regulator — —
Dickeya dadantii 3937 0.37 DDA3937_RS14980 mannitol dehydrogenase family protein 0.19 DDA3937_RS16365 two-component system response regulator BtsR low > 74
Klebsiella michiganensis M5al 0.36 BWI76_RS19755 fructuronate reductase 0.16 BWI76_RS19470 DNA-binding response regulator low > 92
Dickeya dianthicola ME23 0.36 DZA65_RS03760 fructuronate reductase 0.18 DZA65_RS17550 two-component system response regulator BtsR low > 75
Dickeya dianthicola 67-19 0.36 HGI48_RS03640 fructuronate reductase 0.18 HGI48_RS16465 two-component system response regulator BtsR low > 71
Variovorax sp. SCN45 0.35 GFF179 D-mannonate oxidoreductase (EC 1.1.1.57) 0.22 GFF3826 Response regulator receiver:LytTr DNA-binding region low > 127
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.35 GFF3094 D-mannonate oxidoreductase (EC 1.1.1.57) 0.16 GFF3820 Two-component response-regulatory protein YehT low > 78
Escherichia coli HS(pFamp)R (ATCC 700891) 0.34 OHPLBJKB_01537 Mannitol 2-dehydrogenase 0.16 OHPLBJKB_01586 Transcriptional regulatory protein BtsR low > 73
Escherichia coli BL21 0.34 ECD_02102 putative NAD-dependent D-mannonate oxidoreductase 0.16 ECD_02054 putative response regulator in two-component system withYehU low > 60
Escherichia coli Nissle 1917 0.34 ECOLIN_RS12705 mannitol dehydrogenase family protein 0.16 ECOLIN_RS12450 two-component system response regulator BtsR low > 52
Escherichia coli BW25113 0.34 b2172 yeiQ predicted dehydrogenase, NAD-dependent (NCBI) 0.16 b2125 yehT orf, hypothetical protein (VIMSS) low > 76
Escherichia coli ECOR27 0.34 NOLOHH_14990 yeiQ Uncharacterized oxidoreductase YeiQ 0.16 NOLOHH_15235 btsR two-component system response regulator BtsR low > 57
Enterobacter asburiae PDN3 0.34 EX28DRAFT_0389 Mannitol-1-phosphate/altronate dehydrogenases 0.16 EX28DRAFT_0437 two component transcriptional regulator, LytTR family low > 76
Escherichia coli ECRC99 0.34 KEDOAH_04770 yeiQ Uncharacterized oxidoreductase YeiQ 0.16 KEDOAH_04250 btsR two-component system response regulator BtsR — —
Escherichia coli ECRC98 0.34 JDDGAC_27375 yeiQ Uncharacterized oxidoreductase YeiQ 0.16 JDDGAC_28005 btsR two-component system response regulator BtsR — —
Escherichia coli ECOR38 0.34 HEPCGN_22680 yeiQ Uncharacterized oxidoreductase YeiQ 0.16 HEPCGN_02640 btsR two-component system response regulator BtsR low > 85
Escherichia coli ECRC101 0.34 OKFHMN_23415 yeiQ Uncharacterized oxidoreductase YeiQ 0.16 OKFHMN_23915 btsR two-component system response regulator BtsR — —
Escherichia coli ECRC101 0.34 MCAODC_14465 yeiQ Uncharacterized oxidoreductase YeiQ 0.16 MCAODC_21245 btsR two-component system response regulator BtsR — —
Escherichia coli ECRC102 0.34 NIAGMN_21180 yeiQ Uncharacterized oxidoreductase YeiQ 0.16 NIAGMN_21850 btsR two-component system response regulator BtsR — —
Escherichia coli ECRC62 0.34 BNILDI_13910 yeiQ Uncharacterized oxidoreductase YeiQ 0.16 BNILDI_14185 btsR two-component system response regulator BtsR — —
Escherichia fergusonii Becca 0.34 EFB2_04121 Polyol:NADP oxidoreductase 0.16 EFB2_01731 Transcriptional regulatory protein BtsR low > 86
Cupriavidus basilensis FW507-4G11 0.34 RR42_RS34965 dioxygenase 0.20 RR42_RS12225 LytR family transcriptional regulator low > 128
Pectobacterium carotovorum WPP14 0.33 HER17_RS17590 fructuronate reductase 0.16 HER17_RS05370 two-component system response regulator BtsR low > 75
Enterobacter sp. TBS_079 0.33 MPMX20_02095 Polyol:NADP oxidoreductase 0.17 MPMX20_03092 Transcriptional regulatory protein BtsR low > 85
Serratia liquefaciens MT49 0.33 IAI46_17285 fructuronate reductase 0.18 IAI46_23615 two-component system response regulator BtsR low > 86
Rahnella sp. WP5 0.33 EX31_RS19095 fructuronate reductase 0.16 EX31_RS00780 two-component system response regulator BtsR low > 89
Pantoea sp. MT58 0.33 IAI47_06820 mannitol dehydrogenase family protein 0.14 IAI47_05560 response regulator transcription factor low > 76
Xanthomonas campestris pv. campestris strain 8004 0.32 Xcc-8004.5221.1 D-mannonate oxidoreductase (EC 1.1.1.57) 0.33 Xcc-8004.830.1 Autolysis response regulater LytR low > 74
Lysobacter sp. OAE881 0.32 ABIE51_RS03660 mannitol dehydrogenase family protein 0.39 ABIE51_RS02955 LytTR family DNA-binding domain-containing protein low > 62
Alteromonas macleodii MIT1002 0.27 MIT1002_02432 Mannitol 2-dehydrogenase 0.18 MIT1002_01990 Transcriptional regulatory protein YehT low > 70
Acidovorax sp. GW101-3H11 0.25 Ac3H11_2939 D-arabinitol 4-dehydrogenase (EC 1.1.1.11) 0.26 Ac3H11_1634 Response regulator receiver:LytTr DNA-binding region low > 79
Ralstonia solanacearum GMI1000 0.25 RS_RS10685 D-arabinitol 4-dehydrogenase 0.21 RS_RS06780 DNA-binding response regulator low > 80
Variovorax sp. OAS795 0.25 ABID97_RS07130 D-arabinitol 4-dehydrogenase 0.24 ABID97_RS08200 LytTR family DNA-binding domain-containing protein low > 91
Herbaspirillum seropedicae SmR1 0.24 HSERO_RS02215 D-arabinitol 4-dehydrogenase 0.20 HSERO_RS18060 LytR family transcriptional regulator low > 78
Ralstonia sp. UNC404CL21Col 0.22 ABZR87_RS18665 D-arabinitol 4-dehydrogenase 0.21 ABZR87_RS11570 LytTR family DNA-binding domain-containing protein low > 80
Sphingomonas koreensis DSMZ 15582 0.20 Ga0059261_2975 Mannitol-1-phosphate/altronate dehydrogenases 0.20 Ga0059261_0044 two component transcriptional regulator, LytTR family low > 68
Pedobacter sp. GW460-11-11-14-LB5 0.12 CA265_RS19880 Altronate oxidoreductase (EC 1.1.1.58) (from data) 0.19 CA265_RS10975 DNA-binding response regulator low > 88
Mucilaginibacter yixingensis YX-36 DSM 26809 0.10 ABZR88_RS10495 tagaturonate reductase 0.22 ABZR88_RS18055 LytTR family DNA-binding domain-containing protein low > 71
Phocaeicola dorei CL03T12C01 0.08 ABI39_RS15480 tagaturonate reductase 0.13 ABI39_RS14405 response regulator transcription factor low > 72
Phocaeicola vulgatus CL09T03C04 0.08 HMPREF1058_RS01585 tagaturonate reductase 0.14 HMPREF1058_RS18080 response regulator transcription factor low > 67
Bacteroides thetaiotaomicron VPI-5482 0.08 BT0825 altronate oxidoreductase (NCBI ptt file) 0.16 BT1319 two-component system response regulator (NCBI ptt file) low > 81
Bacteroides stercoris CC31F 0.08 HMPREF1181_RS14410 tagaturonate reductase 0.12 HMPREF1181_RS12495 response regulator transcription factor low > 56
Parabacteroides merdae CL09T00C40 0.06 HMPREF1078_RS05895 tagaturonate reductase 0.16 HMPREF1078_RS06285 LytTR family DNA-binding domain-containing protein low > 61

Not shown: 13 genomes with orthologs for PS417_12695 only; 26 genomes with orthologs for PS417_27535 only