Conservation of cofitness between PS417_20030 and PS417_27320 in Pseudomonas simiae WCS417

50 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_20030 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 1.0 PS417_27320 hemolysin secretion protein D 0.21 16
Pseudomonas fluorescens SBW25-INTG 0.87 PFLU_RS21995 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.90 PFLU_RS28975 HlyD family efflux transporter periplasmic adaptor subunit low > 109
Pseudomonas fluorescens SBW25 0.87 PFLU_RS21995 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.90 PFLU_RS28975 HlyD family efflux transporter periplasmic adaptor subunit low > 109
Pseudomonas fluorescens FW300-N2E3 0.84 AO353_02605 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.76 AO353_08790 hemolysin secretion protein D low > 101
Pseudomonas fluorescens FW300-N2E2 0.79 Pf6N2E2_5744 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) 0.82 Pf6N2E2_4473 HlyD family secretion protein — —
Pseudomonas fluorescens FW300-N2C3 0.76 AO356_19170 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.78 AO356_12980 hemolysin secretion protein D low > 104
Pseudomonas sp. RS175 0.76 PFR28_03202 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.79 PFR28_04328 hypothetical protein low > 88
Pseudomonas putida KT2440 0.68 PP_1679 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.68 PP_5206 putative translation-related protein low > 96
Pseudomonas stutzeri RCH2 0.55 Psest_3006 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.34 Psest_4259 Multidrug resistance efflux pump low > 67
Pseudomonas sp. S08-1 0.54 OH686_04955 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.14 OH686_05800 hypothetical protein low > 80
Ralstonia solanacearum UW163 0.38 UW163_RS09190 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.09 UW163_RS03390 secretion protein HlyD — —
Ralstonia solanacearum IBSBF1503 0.38 RALBFv3_RS04480 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.09 RALBFv3_RS10190 secretion protein HlyD 0.57 37
Ralstonia solanacearum PSI07 0.38 RPSI07_RS12890 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.11 RPSI07_RS23155 hypothetical protein low > 81
Cupriavidus basilensis FW507-4G11 0.35 RR42_RS16120 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.30 RR42_RS09740 hemolysin secretion protein D low > 128
Desulfovibrio vulgaris Miyazaki F 0.35 DvMF_2122 nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase (RefSeq) 0.13 DvMF_2157 secretion protein HlyD family protein (RefSeq) low > 51
Dechlorosoma suillum PS 0.35 Dsui_0472 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.38 Dsui_0267 multidrug resistance efflux pump low > 51
Bacteroides ovatus ATCC 8483 0.35 BACOVA_03275 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.13 BACOVA_03726 auxiliary transport protein, membrane fusion protein (MFP) family protein low > 94
Acidovorax sp. GW101-3H11 0.34 Ac3H11_1000 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) 0.13 Ac3H11_502 Membrane-fusion protein low > 79
Variovorax sp. OAS795 0.34 ABID97_RS17335 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.15 ABID97_RS10425 HlyD family efflux transporter periplasmic adaptor subunit — —
Ralstonia solanacearum GMI1000 0.34 RS_RS12035 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.10 RS_RS00805 secretion protein HlyD — —
Azospirillum brasilense Sp245 0.34 AZOBR_RS03460 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.35 AZOBR_RS27955 glycoside hydrolase family 43 — —
Sphingomonas koreensis DSMZ 15582 0.34 Ga0059261_0625 nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) 0.15 Ga0059261_2557 Multidrug resistance efflux pump low > 68
Parabacteroides merdae CL09T00C40 0.34 HMPREF1078_RS17680 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.13 HMPREF1078_RS10100 efflux RND transporter periplasmic adaptor subunit low > 61
Bacteroides stercoris CC31F 0.34 HMPREF1181_RS15655 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.12 HMPREF1181_RS10525 efflux RND transporter periplasmic adaptor subunit low > 56
Herbaspirillum seropedicae SmR1 0.32 HSERO_RS09770 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.36 HSERO_RS09130 hemolysin D low > 78
Phocaeicola dorei CL03T12C01 0.32 ABI39_RS16455 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.14 ABI39_RS17365 HlyD family efflux transporter periplasmic adaptor subunit low > 72
Variovorax sp. SCN45 0.32 GFF425 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) 0.13 GFF1141 Membrane-fusion protein — —
Phocaeicola vulgatus CL09T03C04 0.32 HMPREF1058_RS01275 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.15 HMPREF1058_RS03860 HlyD family efflux transporter periplasmic adaptor subunit low > 67
Ralstonia sp. UNC404CL21Col 0.32 ABZR87_RS00075 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.32 ABZR87_RS19890 efflux RND transporter periplasmic adaptor subunit low > 80
Rhodopseudomonas palustris CGA009 0.32 TX73_010790 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.40 TX73_003525 efflux RND transporter periplasmic adaptor subunit low > 86
Vibrio cholerae E7946 ATCC 55056 0.29 CSW01_06260 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.10 CSW01_08080 HlyD family secretion protein low > 62
Rahnella sp. WP5 0.29 EX31_RS09920 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.15 EX31_RS00880 secretion protein HlyD low > 89
Escherichia coli ECRC101 0.28 MCAODC_20255 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.36 MCAODC_06985 yhiI Uncharacterized protein YhiI — —
Escherichia coli ECRC99 0.28 KEDOAH_02975 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.36 KEDOAH_11675 yhiI Uncharacterized protein YhiI — —
Sinorhizobium meliloti 1021 0.28 SMc04214 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.12 SM_b21207 hypothetical protein — —
Escherichia coli ECRC101 0.28 OKFHMN_25135 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.36 OKFHMN_16465 yhiI Uncharacterized protein YhiI — —
Escherichia coli ECRC102 0.28 NIAGMN_22640 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.36 NIAGMN_14235 yhiI Uncharacterized protein YhiI — —
Escherichia coli ECRC62 0.28 BNILDI_14875 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.35 BNILDI_03155 yhiI Uncharacterized protein YhiI — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.28 OHPLBJKB_01717 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.36 OHPLBJKB_00214 hypothetical protein low > 73
Magnetospirillum magneticum AMB-1 0.28 AMB_RS02805 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.12 AMB_RS00920 secretion protein HlyD — —
Escherichia coli BW25113 0.28 b1991 cobT nicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferase (NCBI) 0.36 b3487 yhiI predicted HlyD family secretion protein (NCBI) low > 76
Escherichia coli BL21 0.28 ECD_01900 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.36 ECD_03337 putative membrane fusion protein (MFP) of efflux pump low > 60
Escherichia coli ECOR27 0.28 NOLOHH_16045 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.36 NOLOHH_08400 yhiI Uncharacterized protein YhiI low > 57
Escherichia coli ECRC98 0.28 JDDGAC_29265 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.36 JDDGAC_20095 yhiI Uncharacterized protein YhiI — —
Escherichia fergusonii Becca 0.28 EFB2_01898 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.35 EFB2_00325 hypothetical protein low > 86
Escherichia coli Nissle 1917 0.28 ECOLIN_RS11620 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.35 ECOLIN_RS19945 HlyD family secretion protein — —
Escherichia coli ECOR38 0.28 HEPCGN_03470 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.36 HEPCGN_15385 yhiI Uncharacterized protein YhiI low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.28 GFF3969 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) 0.34 GFF525 Putative membrane protein low > 78
Klebsiella michiganensis M5al 0.27 BWI76_RS23000 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.33 BWI76_RS03515 hypothetical protein low > 92
Agrobacterium fabrum C58 0.27 Atu1890 cobyrinic acid synthase 0.33 Atu4666 HlyD family secretion protein — —
Rhodospirillum rubrum S1H 0.25 Rru_A0667 Nicotinate-nucleotide-dimethylbenzimidazolephosphoribosyltransferase (NCBI) 0.20 Rru_A0096 Secretion protein HlyD (NCBI) low > 58

Not shown: 28 genomes with orthologs for PS417_20030 only; 13 genomes with orthologs for PS417_27320 only