Conservation of cofitness between GFF1977 and GFF4792 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

56 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF1977 Manganese transport protein MntH 1.0 GFF4792 5-nucleotidase SurE (EC 3.1.3.5) @ Exopolyphosphatase (EC 3.6.1.11) 0.48 16
Escherichia coli BL21 0.94 ECD_02301 manganese/divalent cation transporter 0.93 ECD_02594 broad specificity 5'(3')-nucleotidase and polyphosphatase low > 61
Escherichia coli ECRC99 0.94 KEDOAH_05910 mntH Mn(2+) uptake NRAMP transporter MntH 0.93 KEDOAH_07660 surE 5'/3'-nucleotidase SurE — —
Escherichia coli ECRC100 0.94 OKFHMN_22310 mntH Mn(2+) uptake NRAMP transporter MntH 0.93 OKFHMN_20480 surE 5'/3'-nucleotidase SurE low > 80
Escherichia coli ECRC101 0.94 MCAODC_12840 mntH Mn(2+) uptake NRAMP transporter MntH 0.93 MCAODC_11005 surE 5'/3'-nucleotidase SurE low > 87
Escherichia coli ECOR27 0.94 NOLOHH_13995 mntH Mn(2+) uptake NRAMP transporter MntH 0.93 NOLOHH_12295 surE 5'/3'-nucleotidase SurE low > 75
Escherichia coli ECRC62 0.94 BNILDI_12845 mntH Mn(2+) uptake NRAMP transporter MntH 0.93 BNILDI_10845 surE 5'/3'-nucleotidase SurE low > 75
Escherichia coli ECRC98 0.94 JDDGAC_26275 mntH Mn(2+) uptake NRAMP transporter MntH 0.93 JDDGAC_24145 surE 5'/3'-nucleotidase SurE low > 86
Escherichia coli ECRC102 0.94 NIAGMN_20085 mntH Mn(2+) uptake NRAMP transporter MntH 0.93 NIAGMN_18250 surE 5'/3'-nucleotidase SurE — —
Escherichia coli Nissle 1917 0.94 ECOLIN_RS13755 Nramp family divalent metal transporter 0.93 ECOLIN_RS15345 5'/3'-nucleotidase SurE low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.94 OHPLBJKB_01330 Divalent metal cation transporter MntH 0.93 OHPLBJKB_00989 '5'/3'-nucleotidase SurE' transl_table=11 low > 73
Escherichia fergusonii Becca 0.94 EFB2_01483 Divalent metal cation transporter MntH 0.93 EFB2_01166 5'/3'-nucleotidase SurE low > 86
Escherichia coli ECOR38 0.94 HEPCGN_21515 mntH Mn(2+) uptake NRAMP transporter MntH 0.93 HEPCGN_19660 surE 5'/3'-nucleotidase SurE low > 87
Escherichia coli BW25113 0.94 b2392 mntH manganese transport protein MntH (NCBI) 0.93 b2744 surE acid phosphatase (NCBI) low > 76
Enterobacter asburiae PDN3 0.92 EX28DRAFT_0232 NRAMP (natural resistance-associated macrophage protein) metal ion transporters 0.92 EX28DRAFT_2840 3'-nucleotidase (EC 3.1.3.6)/5'-nucleotidase (EC 3.1.3.5)/exopolyphosphatase (EC 3.6.1.11) low > 76
Enterobacter sp. TBS_079 0.91 MPMX20_03286 Divalent metal cation transporter MntH 0.93 MPMX20_03630 5'/3'-nucleotidase SurE low > 85
Klebsiella michiganensis M5al 0.89 BWI76_RS20535 manganese transporter MntH 0.95 BWI76_RS22660 5'/3'-nucleotidase SurE — —
Pantoea sp. MT58 0.79 IAI47_05535 Nramp family divalent metal transporter 0.88 IAI47_04220 5'/3'-nucleotidase SurE low > 76
Serratia liquefaciens MT49 0.79 IAI46_18255 Nramp family divalent metal transporter 0.83 IAI46_03775 5'/3'-nucleotidase SurE low > 86
Rahnella sp. WP5 0.79 EX31_RS20075 Mn(2+) uptake NRAMP transporter MntH 0.79 EX31_RS07840 5'/3'-nucleotidase SurE low > 89
Erwinia tracheiphila SCR3 0.73 LU632_RS06525 Nramp family divalent metal transporter 0.85 LU632_RS06465 surE 5'/3'-nucleotidase SurE low > 74
Ralstonia sp. UNC404CL21Col 0.41 ABZR87_RS21390 Nramp family divalent metal transporter 0.42 ABZR87_RS10860 5'/3'-nucleotidase SurE — —
Burkholderia phytofirmans PsJN 0.40 BPHYT_RS05140 manganese transporter 0.42 BPHYT_RS09100 stationary phase survival protein SurE 0.40 6
Herbaspirillum seropedicae SmR1 0.39 HSERO_RS10500 manganese transporter 0.41 HSERO_RS14845 stationary phase survival protein SurE low > 78
Azospirillum sp. SherDot2 0.38 MPMX19_03690 Divalent metal cation transporter MntH 0.34 MPMX19_01169 5'-nucleotidase SurE low > 112
Agrobacterium fabrum C58 0.37 Atu1736 manganese transport protein 0.30 Atu1702 stationary-phase survival protein low > 89
Rhodopseudomonas palustris CGA009 0.36 TX73_014020 Nramp family divalent metal transporter 0.30 TX73_014710 5'/3'-nucleotidase SurE low > 86
Ralstonia solanacearum IBSBF1503 0.36 RALBFv3_RS21155 divalent metal cation transporter 0.42 RALBFv3_RS15220 5'/3'-nucleotidase SurE low > 76
Ralstonia solanacearum UW163 0.36 UW163_RS22295 divalent metal cation transporter 0.42 UW163_RS12685 5'/3'-nucleotidase SurE — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.36 Psyr_2305 Natural resistance-associated macrophage protein 0.44 Psyr_1371 5'-nucleotidase / exopolyphosphatase / 3'-nucleotidase low > 86
Pseudomonas syringae pv. syringae B728a 0.36 Psyr_2305 Natural resistance-associated macrophage protein 0.44 Psyr_1371 5'-nucleotidase / exopolyphosphatase / 3'-nucleotidase low > 86
Pseudomonas simiae WCS417 0.36 PS417_11460 divalent metal cation transporter MntH 0.42 PS417_06350 stationary phase survival protein SurE low > 88
Variovorax sp. SCN45 0.36 GFF7172 Manganese transport protein MntH 0.44 GFF2845 5'-nucleotidase SurE (EC 3.1.3.5) low > 127
Ralstonia solanacearum GMI1000 0.36 RS_RS19660 divalent metal cation transporter 0.42 RS_RS06030 5'-nucleotidase SurE low > 80
Ralstonia solanacearum PSI07 0.36 RPSI07_RS01990 divalent metal cation transporter 0.43 RPSI07_RS18155 5'/3'-nucleotidase SurE low > 81
Paraburkholderia bryophila 376MFSha3.1 0.35 H281DRAFT_03197 manganese transport protein 0.42 H281DRAFT_00840 5'-nucleotidase /3'-nucleotidase /exopolyphosphatase low > 103
Pseudomonas fluorescens SBW25-INTG 0.35 PFLU_RS12040 divalent metal cation transporter 0.42 PFLU_RS06415 5'/3'-nucleotidase SurE low > 109
Pseudomonas fluorescens SBW25 0.35 PFLU_RS12040 divalent metal cation transporter 0.42 PFLU_RS06415 5'/3'-nucleotidase SurE low > 109
Rhizobium sp. OAE497 0.35 ABIE40_RS05385 Nramp family divalent metal transporter 0.30 ABIE40_RS08480 5'/3'-nucleotidase SurE low > 107
Paraburkholderia sabiae LMG 24235 0.34 QEN71_RS20115 Nramp family divalent metal transporter 0.43 QEN71_RS22255 5'/3'-nucleotidase SurE 0.69 76
Xanthomonas campestris pv. campestris strain 8004 0.34 Xcc-8004.2406.1 Manganese transport protein MntH 0.51 Xcc-8004.3131.1 hypothetical protein low > 74
Paraburkholderia graminis OAS925 0.32 ABIE53_002372 manganese transport protein 0.42 ABIE53_002054 5'-nucleotidase low > 113
Cupriavidus basilensis FW507-4G11 0.29 RR42_RS16785 manganese transporter 0.41 RR42_RS13200 stationary phase survival protein SurE low > 128
Bacteroides thetaiotaomicron VPI-5482 0.24 BT0629 Mn2+ and Fe2+ transport protein (NCBI ptt file) 0.23 BT4003 stationary-phase survival protein SurE (NCBI ptt file) low > 81
Bacteroides stercoris CC31F 0.24 HMPREF1181_RS16610 Nramp family divalent metal transporter 0.22 HMPREF1181_RS09175 5'/3'-nucleotidase SurE low > 56
Phocaeicola dorei CL03T12C01 0.24 ABI39_RS14005 Nramp family divalent metal transporter 0.27 ABI39_RS09735 5'/3'-nucleotidase SurE low > 72
Bacteroides ovatus ATCC 8483 0.24 BACOVA_02251 metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 0.23 BACOVA_04822 5'/3'-nucleotidase SurE low > 94
Phocaeicola vulgatus CL09T03C04 0.23 HMPREF1058_RS17790 Nramp family divalent metal transporter 0.27 HMPREF1058_RS14085 5'/3'-nucleotidase SurE low > 67
Desulfovibrio vulgaris Miyazaki F 0.23 DvMF_0379 natural resistance-associated macrophage protein (RefSeq) 0.33 DvMF_0021 stationary-phase survival protein SurE (RefSeq) low > 51
Parabacteroides merdae CL09T00C40 0.23 HMPREF1078_RS08610 Nramp family divalent metal transporter 0.27 HMPREF1078_RS04545 5'/3'-nucleotidase SurE low > 61
Kangiella aquimarina DSM 16071 0.17 B158DRAFT_1995 Mn2+ and Fe2+ transporters of the NRAMP family 0.54 B158DRAFT_2296 3'-nucleotidase (EC 3.1.3.6)/5'-nucleotidase (EC 3.1.3.5)/exopolyphosphatase (EC 3.6.1.11) low > 40
Echinicola vietnamensis KMM 6221, DSM 17526 0.13 Echvi_3011 Mn2+ and Fe2+ transporters of the NRAMP family 0.27 Echvi_3388 5'/3'-nucleotidase SurE low > 79
Rhodanobacter sp. FW510-T8 0.11 OKGIIK_05150 Iron transporter 0.52 OKGIIK_08115 surE 5'/3'-nucleotidase SurE low > 52
Sinorhizobium meliloti 1021 0.11 SMa1115 Mn2+/Fe2+ transporter NRAMP family 0.30 SMc02063 stationary phase survival protein SurE — —
Rhodanobacter denitrificans MT42 0.10 LRK55_RS17625 divalent metal cation transporter 0.52 LRK55_RS16375 5'/3'-nucleotidase SurE low > 63
Rhodanobacter denitrificans FW104-10B01 0.10 LRK54_RS17405 divalent metal cation transporter 0.52 LRK54_RS16650 5'/3'-nucleotidase SurE 0.22 42
Variovorax sp. OAS795 0.10 ABID97_RS22130 divalent metal cation transporter 0.44 ABID97_RS10715 5'/3'-nucleotidase SurE low > 91

Not shown: 7 genomes with orthologs for GFF1977 only; 39 genomes with orthologs for GFF4792 only