Conservation of cofitness between GFF138 and GFF4626 in Hydrogenophaga sp. GW460-11-11-14-LB1

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF138 Hydroxypyruvate isomerase (EC 5.3.1.22) 1.0 GFF4626 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.59 19
Acidovorax sp. GW101-3H11 0.58 Ac3H11_1087 Hydroxypyruvate isomerase (EC 5.3.1.22) 0.81 Ac3H11_2027 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) low > 79
Paraburkholderia bryophila 376MFSha3.1 0.57 H281DRAFT_00786 hydroxypyruvate isomerase 0.67 H281DRAFT_00395 hydroxymethylpyrimidine synthase low > 103
Paraburkholderia graminis OAS925 0.56 ABIE53_001999 hydroxypyruvate isomerase 0.67 ABIE53_002857 phosphomethylpyrimidine synthase low > 113
Burkholderia phytofirmans PsJN 0.56 BPHYT_RS08830 hydroxypyruvate isomerase 0.67 BPHYT_RS13220 phosphomethylpyrimidine synthase low > 109
Castellaniella sp019104865 MT123 0.55 ABCV34_RS12135 hydroxypyruvate isomerase 0.69 ABCV34_RS10825 phosphomethylpyrimidine synthase ThiC low > 48
Variovorax sp. OAS795 0.55 ABID97_RS22325 hydroxypyruvate isomerase 0.81 ABID97_RS25235 phosphomethylpyrimidine synthase ThiC low > 91
Ralstonia sp. UNC404CL21Col 0.55 ABZR87_RS03890 hydroxypyruvate isomerase 0.63 ABZR87_RS04785 phosphomethylpyrimidine synthase ThiC low > 80
Azospirillum brasilense Sp245 0.55 AZOBR_RS07960 hydroxypyruvate isomerase 0.66 AZOBR_RS07940 phosphomethylpyrimidine synthase low > 97
Ralstonia solanacearum PSI07 0.55 RPSI07_RS08645 hydroxypyruvate isomerase 0.63 RPSI07_RS23420 phosphomethylpyrimidine synthase ThiC low > 81
Paraburkholderia sabiae LMG 24235 0.54 QEN71_RS22540 hydroxypyruvate isomerase 0.68 QEN71_RS05480 phosphomethylpyrimidine synthase ThiC 0.31 146
Sinorhizobium meliloti 1021 0.54 SM_b20680 hydroxypyruvate isomerase 0.64 SM_b20615 thiamine biosynthesis protein ThiC low > 103
Ralstonia solanacearum IBSBF1503 0.54 RALBFv3_RS08580 hydroxypyruvate isomerase 0.63 RALBFv3_RS09940 phosphomethylpyrimidine synthase ThiC low > 76
Ralstonia solanacearum UW163 0.54 UW163_RS05030 hydroxypyruvate isomerase 0.63 UW163_RS03640 phosphomethylpyrimidine synthase ThiC — —
Rahnella sp. WP5 0.53 EX31_RS04585 hydroxypyruvate isomerase 0.64 EX31_RS16815 phosphomethylpyrimidine synthase ThiC low > 89
Ralstonia solanacearum GMI1000 0.53 RS_RS16445 hydroxypyruvate isomerase 0.62 RS_RS00555 phosphomethylpyrimidine synthase low > 80
Variovorax sp. SCN45 0.53 GFF1799 Hydroxypyruvate isomerase (EC 5.3.1.22) 0.83 GFF2000 Phosphomethylpyrimidine synthase ThiC (EC 4.1.99.17) low > 127
Pseudomonas fluorescens FW300-N1B4 0.53 Pf1N1B4_3660 Hydroxypyruvate isomerase (EC 5.3.1.22) 0.67 Pf1N1B4_1447 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) low > 87
Pseudomonas simiae WCS417 0.53 PS417_08805 hydroxypyruvate isomerase 0.67 PS417_02355 thiamine biosynthesis protein ThiC low > 88
Pseudomonas fluorescens GW456-L13 0.52 PfGW456L13_4296 Hydroxypyruvate isomerase (EC 5.3.1.22) 0.67 PfGW456L13_187 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) low > 87
Pseudomonas fluorescens SBW25-INTG 0.52 PFLU_RS08865 hydroxypyruvate isomerase 0.67 PFLU_RS02430 phosphomethylpyrimidine synthase ThiC low > 109
Pseudomonas fluorescens SBW25 0.52 PFLU_RS08865 hydroxypyruvate isomerase 0.67 PFLU_RS02430 phosphomethylpyrimidine synthase ThiC low > 109
Pseudomonas fluorescens FW300-N2E3 0.52 AO353_01925 hydroxypyruvate isomerase 0.66 AO353_13010 thiamine biosynthesis protein ThiC 0.21 91
Pseudomonas fluorescens FW300-N2E2 0.52 Pf6N2E2_5838 Hydroxypyruvate isomerase (EC 5.3.1.22) 0.67 Pf6N2E2_3644 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.52 5
Pseudomonas putida KT2440 0.52 PP_4298 hydroxypyruvate isomerase 0.67 PP_4922 Phosphomethylpyrimidine synthase low > 96
Pseudomonas sp. RS175 0.52 PFR28_03111 Hydroxypyruvate isomerase 0.67 PFR28_05091 Phosphomethylpyrimidine synthase 0.17 79
Pseudomonas fluorescens FW300-N2C3 0.51 AO356_19615 hydroxypyruvate isomerase 0.67 AO356_08810 thiamine biosynthesis protein ThiC low > 104
Pseudomonas stutzeri RCH2 0.49 Psest_1180 hydroxypyruvate isomerase 0.67 Psest_0477 thiamine biosynthesis protein ThiC low > 67
Herbaspirillum seropedicae SmR1 0.47 HSERO_RS21140 hydroxypyruvate isomerase 0.68 HSERO_RS02120 phosphomethylpyrimidine synthase ThiC low > 78
Marinobacter adhaerens HP15 0.45 HP15_3485 hydroxypyruvate isomerase 0.67 HP15_453 thiamine biosynthesis protein thiC low > 73
Pseudomonas syringae pv. syringae B728a 0.45 Psyr_0462 Hydroxypyruvate isomerase 0.66 Psyr_0544 hydroxymethylpyrimidine synthase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.45 Psyr_0462 Hydroxypyruvate isomerase 0.66 Psyr_0544 hydroxymethylpyrimidine synthase low > 86
Dechlorosoma suillum PS 0.43 Dsui_3423 hydroxypyruvate isomerase 0.67 Dsui_0422 thiamine biosynthesis protein ThiC — —
Serratia liquefaciens MT49 0.42 IAI46_07590 HPr family phosphocarrier protein 0.63 IAI46_01320 phosphomethylpyrimidine synthase ThiC low > 86
Rhodospirillum rubrum S1H 0.41 Rru_A2503 Hydroxypyruvate isomerase (NCBI) 0.60 Rru_A2008 Thiamine biosynthesis protein ThiC (NCBI) low > 58
Bosea sp. OAE506 0.41 ABIE41_RS11085 2-oxo-tetronate isomerase 0.63 ABIE41_RS02770 phosphomethylpyrimidine synthase ThiC low > 77
Pectobacterium carotovorum WPP14 0.39 HER17_RS00550 hydroxypyruvate isomerase family protein 0.63 HER17_RS20380 phosphomethylpyrimidine synthase ThiC low > 75
Rhodopseudomonas palustris CGA009 0.39 TX73_009015 hydroxypyruvate isomerase family protein 0.63 TX73_018540 phosphomethylpyrimidine synthase ThiC low > 86
Dinoroseobacter shibae DFL-12 0.35 Dshi_1554 Hydroxypyruvate isomerase (RefSeq) 0.64 Dshi_4080 thiamine biosynthesis protein ThiC (RefSeq) — —
Acinetobacter radioresistens SK82 0.32 MPMX26_00532 Hydroxypyruvate isomerase 0.65 MPMX26_00180 Phosphomethylpyrimidine synthase low > 36
Pseudomonas sp. S08-1 0.28 OH686_20930 Hydroxypyruvate isomerase 0.67 OH686_15885 phosphomethylpyrimidine synthase low > 80

Not shown: 21 genomes with orthologs for GFF138 only; 32 genomes with orthologs for GFF4626 only