Conservation of cofitness between PS417_04435 and PS417_23390 in Pseudomonas simiae WCS417

55 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_04435 uracil phosphoribosyltransferase 1.0 PS417_23390 ubiquinol oxidase subunit II 0.35 15
Pseudomonas fluorescens SBW25-INTG 0.98 PFLU_RS04485 uracil phosphoribosyltransferase 0.99 PFLU_RS25220 ubiquinol oxidase subunit II 0.67 8
Pseudomonas fluorescens SBW25 0.98 PFLU_RS04485 uracil phosphoribosyltransferase 0.99 PFLU_RS25220 ubiquinol oxidase subunit II 0.85 15
Pseudomonas fluorescens FW300-N2E3 0.95 AO353_14855 uracil phosphoribosyltransferase 0.73 AO353_15450 ubiquinol oxidase subunit II low > 101
Pseudomonas fluorescens GW456-L13 0.94 PfGW456L13_1597 Uracil phosphoribosyltransferase (EC 2.4.2.9) 0.73 PfGW456L13_4936 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) low > 87
Pseudomonas fluorescens FW300-N2E2 0.94 Pf6N2E2_5235 Uracil phosphoribosyltransferase (EC 2.4.2.9) 0.71 Pf6N2E2_5317 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) low > 103
Pseudomonas syringae pv. syringae B728a 0.94 Psyr_0969 uracil phosphoribosyltransferase 0.70 Psyr_1141 cytochrome bo3 quinol oxidase subunit 2 — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.94 Psyr_0969 uracil phosphoribosyltransferase 0.70 Psyr_1141 cytochrome bo3 quinol oxidase subunit 2 — —
Pseudomonas fluorescens FW300-N2C3 0.93 AO356_16565 uracil phosphoribosyltransferase 0.72 AO356_16960 ubiquinol oxidase subunit II low > 104
Pseudomonas sp. RS175 0.93 PFR28_03641 Uracil phosphoribosyltransferase 0.72 PFR28_00242 Cytochrome bo(3) ubiquinol oxidase subunit 2 low > 88
Pseudomonas fluorescens FW300-N1B4 0.93 Pf1N1B4_2934 Uracil phosphoribosyltransferase (EC 2.4.2.9) 0.70 Pf1N1B4_973 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) low > 87
Pseudomonas putida KT2440 0.93 PP_0746 Uracil phosphoribosyltransferase 0.72 PP_0812 cytochrome bo terminal oxidase subunit II — —
Acinetobacter radioresistens SK82 0.78 MPMX26_02542 Uracil phosphoribosyltransferase 0.43 MPMX26_01162 Cytochrome bo(3) ubiquinol oxidase subunit 2 low > 36
Enterobacter asburiae PDN3 0.74 EX28DRAFT_0170 uracil phosphoribosyltransferase (EC 2.4.2.9) 0.53 EX28DRAFT_2539 cytochrome o ubiquinol oxidase subunit II low > 76
Enterobacter sp. TBS_079 0.74 MPMX20_03352 Uracil phosphoribosyltransferase 0.53 MPMX20_01023 Cytochrome bo(3) ubiquinol oxidase subunit 2 low > 85
Klebsiella michiganensis M5al 0.74 BWI76_RS20945 uracil phosphoribosyltransferase 0.53 BWI76_RS06495 cytochrome ubiquinol oxidase subunit II low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.73 GFF2171 Uracil phosphoribosyltransferase (EC 2.4.2.9) 0.53 GFF4346 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) low > 78
Escherichia coli BW25113 0.73 b2498 upp uracil phosphoribosyltransferase (VIMSS) 0.54 b0432 cyoA cytochrome o ubiquinol oxidase subunit II (NCBI) low > 76
Escherichia coli ECRC101 0.73 OKFHMN_21815 upp uracil phosphoribosyltransferase 0.54 OKFHMN_08360 cyoA cytochrome o ubiquinol oxidase subunit II — —
Escherichia fergusonii Becca 0.73 EFB2_01400 Uracil phosphoribosyltransferase 0.54 EFB2_03625 Cytochrome bo(3) ubiquinol oxidase subunit 2 low > 86
Escherichia coli ECOR27 0.73 NOLOHH_13465 upp uracil phosphoribosyltransferase 0.54 NOLOHH_01295 cyoA cytochrome o ubiquinol oxidase subunit II low > 57
Escherichia coli ECRC101 0.73 MCAODC_12345 upp uracil phosphoribosyltransferase 0.54 MCAODC_27585 cyoA cytochrome o ubiquinol oxidase subunit II — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.73 OHPLBJKB_01228 Uracil phosphoribosyltransferase 0.54 OHPLBJKB_03241 Cytochrome bo(3) ubiquinol oxidase subunit 2 0.65 68
Escherichia coli Nissle 1917 0.73 ECOLIN_RS14185 uracil phosphoribosyltransferase 0.54 ECOLIN_RS02595 cytochrome o ubiquinol oxidase subunit II low > 52
Escherichia coli ECRC99 0.73 KEDOAH_06405 upp uracil phosphoribosyltransferase 0.54 KEDOAH_19605 cyoA cytochrome o ubiquinol oxidase subunit II — —
Escherichia coli BL21 0.73 ECD_02390 uracil phosphoribosyltransferase 0.54 ECD_00383 cytochrome o ubiquinol oxidase subunit II 0.80 17
Escherichia coli ECOR38 0.73 HEPCGN_20980 upp uracil phosphoribosyltransferase 0.54 HEPCGN_06975 cyoA cytochrome o ubiquinol oxidase subunit II low > 85
Escherichia coli ECRC102 0.73 NIAGMN_19585 upp uracil phosphoribosyltransferase 0.54 NIAGMN_06415 cyoA cytochrome o ubiquinol oxidase subunit II — —
Escherichia coli ECRC62 0.73 BNILDI_12275 upp uracil phosphoribosyltransferase 0.54 BNILDI_22710 cyoA cytochrome o ubiquinol oxidase subunit II — —
Escherichia coli ECRC98 0.73 JDDGAC_25760 upp uracil phosphoribosyltransferase 0.54 JDDGAC_12015 cyoA cytochrome o ubiquinol oxidase subunit II — —
Dickeya dianthicola 67-19 0.73 HGI48_RS06075 uracil phosphoribosyltransferase 0.57 HGI48_RS05660 cytochrome o ubiquinol oxidase subunit II low > 71
Serratia liquefaciens MT49 0.73 IAI46_18880 uracil phosphoribosyltransferase 0.53 IAI46_04985 cytochrome o ubiquinol oxidase subunit II low > 86
Dickeya dadantii 3937 0.72 DDA3937_RS06030 uracil phosphoribosyltransferase 0.56 DDA3937_RS05615 cytochrome o ubiquinol oxidase subunit II low > 74
Dickeya dianthicola ME23 0.72 DZA65_RS06425 uracil phosphoribosyltransferase 0.57 DZA65_RS05985 cytochrome o ubiquinol oxidase subunit II low > 75
Pantoea sp. MT58 0.72 IAI47_05185 uracil phosphoribosyltransferase 0.58 IAI47_14680 cytochrome o ubiquinol oxidase subunit II low > 76
Pectobacterium carotovorum WPP14 0.72 HER17_RS15460 uracil phosphoribosyltransferase 0.57 HER17_RS15875 cytochrome o ubiquinol oxidase subunit II low > 75
Erwinia tracheiphila SCR3 0.71 LU632_RS08280 upp uracil phosphoribosyltransferase 0.57 LU632_RS18375 cyoA cytochrome o ubiquinol oxidase subunit II — —
Rahnella sp. WP5 0.71 EX31_RS22700 uracil phosphoribosyltransferase 0.53 EX31_RS22220 cytochrome o ubiquinol oxidase subunit II low > 89
Shewanella sp. ANA-3 0.70 Shewana3_2544 upp uracil phosphoribosyltransferase (RefSeq) 0.49 Shewana3_4031 ubiquinol oxidase, subunit II (RefSeq) low > 73
Shewanella loihica PV-4 0.70 Shew_1514 upp uracil phosphoribosyltransferase (RefSeq) 0.53 Shew_0366 ubiquinol oxidase, subunit II (RefSeq) low > 60
Dyella japonica UNC79MFTsu3.2 0.69 ABZR86_RS09615 uracil phosphoribosyltransferase 0.47 ABZR86_RS07625 ubiquinol oxidase subunit II low > 74
Alteromonas macleodii MIT1002 0.67 MIT1002_02893 Uracil phosphoribosyltransferase 0.52 MIT1002_03929 Ubiquinol oxidase subunit 2 precursor low > 70
Cupriavidus basilensis FW507-4G11 0.51 RR42_RS30815 uracil phosphoribosyltransferase 0.55 RR42_RS32600 cytochrome O ubiquinol oxidase subunit II low > 128
Acidovorax sp. GW101-3H11 0.51 Ac3H11_2428 Uracil phosphoribosyltransferase (EC 2.4.2.9) 0.41 Ac3H11_3141 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) low > 79
Caulobacter crescentus NA1000 Δfur 0.50 CCNA_02351 uracil phosphoribosyltransferase 0.49 CCNA_01851 quinol cytochrome oxidase polypeptide II low > 67
Caulobacter crescentus NA1000 0.50 CCNA_02351 uracil phosphoribosyltransferase 0.49 CCNA_01851 quinol cytochrome oxidase polypeptide II low > 66
Ralstonia solanacearum GMI1000 0.49 RS_RS10980 uracil phosphoribosyltransferase 0.54 RS_RS14610 ubiquinol oxidase subunit II low > 80
Ralstonia solanacearum UW163 0.48 UW163_RS10140 uracil phosphoribosyltransferase 0.58 UW163_RS06965 ubiquinol oxidase subunit II — —
Ralstonia solanacearum IBSBF1503 0.48 RALBFv3_RS03530 uracil phosphoribosyltransferase 0.58 RALBFv3_RS06660 ubiquinol oxidase subunit II — —
Paraburkholderia sabiae LMG 24235 0.48 QEN71_RS24390 uracil phosphoribosyltransferase 0.54 QEN71_RS13340 ubiquinol oxidase subunit II low > 153
Ralstonia solanacearum PSI07 0.48 RPSI07_RS13695 uracil phosphoribosyltransferase 0.57 RPSI07_RS10565 ubiquinol oxidase subunit II low > 81
Ralstonia sp. UNC404CL21Col 0.47 ABZR87_RS15395 uracil phosphoribosyltransferase 0.55 ABZR87_RS02335 ubiquinol oxidase subunit II low > 80
Burkholderia phytofirmans PsJN 0.47 BPHYT_RS06415 uracil phosphoribosyltransferase 0.53 BPHYT_RS24915 ubiquinol oxidase subunit II low > 109
Paraburkholderia graminis OAS925 0.46 ABIE53_001547 uracil phosphoribosyltransferase 0.52 ABIE53_005340 cytochrome o ubiquinol oxidase subunit 2 low > 113
Paraburkholderia bryophila 376MFSha3.1 0.46 H281DRAFT_04523 uracil phosphoribosyltransferase 0.50 H281DRAFT_03426 cytochrome bo3 quinol oxidase subunit 2 (EC 1.10.3.-) low > 103
Herbaspirillum seropedicae SmR1 0.46 HSERO_RS03500 uracil phosphoribosyltransferase 0.45 HSERO_RS12320 cytochrome O ubiquinol oxidase — —

Not shown: 43 genomes with orthologs for PS417_04435 only; 0 genomes with orthologs for PS417_23390 only