Conservation of cofitness between PS417_23390 and PS417_23380 in Pseudomonas simiae WCS417

55 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_23390 ubiquinol oxidase subunit II 1.0 PS417_23380 cytochrome o ubiquinol oxidase subunit III 0.84 4
Pseudomonas fluorescens SBW25 0.99 PFLU_RS25220 ubiquinol oxidase subunit II 1.00 PFLU_RS25210 cytochrome o ubiquinol oxidase subunit III 0.94 3
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS25220 ubiquinol oxidase subunit II 1.00 PFLU_RS25210 cytochrome o ubiquinol oxidase subunit III 0.93 3
Pseudomonas fluorescens FW300-N2E3 0.73 AO353_15450 ubiquinol oxidase subunit II 0.80 AO353_15460 cytochrome o ubiquinol oxidase subunit III 0.87 3
Pseudomonas fluorescens GW456-L13 0.73 PfGW456L13_4936 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) 0.82 PfGW456L13_4934 Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-) 0.95 4
Pseudomonas putida KT2440 0.72 PP_0812 cytochrome bo terminal oxidase subunit II 0.69 PP_0814 cytochrome bo terminal oxidase subunit III — —
Pseudomonas fluorescens FW300-N2C3 0.72 AO356_16960 ubiquinol oxidase subunit II 0.81 AO356_16970 cytochrome o ubiquinol oxidase subunit III 0.81 4
Pseudomonas sp. RS175 0.72 PFR28_00242 Cytochrome bo(3) ubiquinol oxidase subunit 2 0.80 PFR28_00244 Cytochrome bo(3) ubiquinol oxidase subunit 3 low > 88
Pseudomonas fluorescens FW300-N2E2 0.71 Pf6N2E2_5317 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) 0.80 Pf6N2E2_5319 Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-) 0.92 3
Pseudomonas syringae pv. syringae B728a ΔmexB 0.70 Psyr_1141 cytochrome bo3 quinol oxidase subunit 2 0.71 Psyr_1143 cytochrome bo3 quinol oxidase subunit 3 — —
Pseudomonas syringae pv. syringae B728a 0.70 Psyr_1141 cytochrome bo3 quinol oxidase subunit 2 0.71 Psyr_1143 cytochrome bo3 quinol oxidase subunit 3 — —
Pseudomonas fluorescens FW300-N1B4 0.70 Pf1N1B4_973 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) 0.88 Pf1N1B4_971 Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-) 0.98 2
Pantoea sp. MT58 0.58 IAI47_14680 cytochrome o ubiquinol oxidase subunit II 0.70 IAI47_14690 cytochrome o ubiquinol oxidase subunit III 0.90 3
Ralstonia solanacearum UW163 0.58 UW163_RS06965 ubiquinol oxidase subunit II 0.59 UW163_RS06975 cytochrome o ubiquinol oxidase subunit III — —
Ralstonia solanacearum IBSBF1503 0.58 RALBFv3_RS06660 ubiquinol oxidase subunit II 0.59 RALBFv3_RS06650 cytochrome o ubiquinol oxidase subunit III — —
Erwinia tracheiphila SCR3 0.57 LU632_RS18375 cyoA cytochrome o ubiquinol oxidase subunit II 0.71 LU632_RS18385 cytochrome o ubiquinol oxidase subunit III — —
Ralstonia solanacearum PSI07 0.57 RPSI07_RS10565 ubiquinol oxidase subunit II 0.59 RPSI07_RS10575 cytochrome o ubiquinol oxidase subunit III — —
Pectobacterium carotovorum WPP14 0.57 HER17_RS15875 cytochrome o ubiquinol oxidase subunit II 0.67 HER17_RS15885 cytochrome o ubiquinol oxidase subunit III 0.77 6
Dickeya dianthicola 67-19 0.57 HGI48_RS05660 cytochrome o ubiquinol oxidase subunit II 0.66 HGI48_RS05650 cytochrome o ubiquinol oxidase subunit III low > 71
Dickeya dianthicola ME23 0.57 DZA65_RS05985 cytochrome o ubiquinol oxidase subunit II 0.67 DZA65_RS05975 cytochrome o ubiquinol oxidase subunit III 0.39 48
Dickeya dadantii 3937 0.56 DDA3937_RS05615 cytochrome o ubiquinol oxidase subunit II 0.67 DDA3937_RS05605 cytochrome o ubiquinol oxidase subunit III — —
Ralstonia sp. UNC404CL21Col 0.55 ABZR87_RS02335 ubiquinol oxidase subunit II 0.56 ABZR87_RS02325 cytochrome o ubiquinol oxidase subunit III 0.78 2
Cupriavidus basilensis FW507-4G11 0.55 RR42_RS32600 cytochrome O ubiquinol oxidase subunit II 0.59 RR42_RS32590 cytochrome o ubiquinol oxidase subunit III 0.55 5
Ralstonia solanacearum GMI1000 0.54 RS_RS14610 ubiquinol oxidase subunit II 0.59 RS_RS14600 cytochrome o ubiquinol oxidase subunit III 0.50 13
Paraburkholderia sabiae LMG 24235 0.54 QEN71_RS13340 ubiquinol oxidase subunit II 0.57 QEN71_RS15350 cytochrome o ubiquinol oxidase subunit III low > 153
Escherichia coli ECRC98 0.54 JDDGAC_12015 cyoA cytochrome o ubiquinol oxidase subunit II 0.70 JDDGAC_12025 cyoC cytochrome o ubiquinol oxidase subunit III — —
Escherichia coli ECOR38 0.54 HEPCGN_06975 cyoA cytochrome o ubiquinol oxidase subunit II 0.70 HEPCGN_06985 cyoC cytochrome o ubiquinol oxidase subunit III low > 85
Escherichia coli ECRC99 0.54 KEDOAH_19605 cyoA cytochrome o ubiquinol oxidase subunit II 0.70 KEDOAH_19595 cyoC cytochrome o ubiquinol oxidase subunit III — —
Escherichia fergusonii Becca 0.54 EFB2_03625 Cytochrome bo(3) ubiquinol oxidase subunit 2 0.70 EFB2_03627 Cytochrome bo(3) ubiquinol oxidase subunit 3 low > 86
Escherichia coli Nissle 1917 0.54 ECOLIN_RS02595 cytochrome o ubiquinol oxidase subunit II 0.70 ECOLIN_RS02585 cytochrome o ubiquinol oxidase subunit III low > 52
Escherichia coli ECRC102 0.54 NIAGMN_06415 cyoA cytochrome o ubiquinol oxidase subunit II 0.70 NIAGMN_06425 cyoC cytochrome o ubiquinol oxidase subunit III — —
Escherichia coli ECRC101 0.54 OKFHMN_08360 cyoA cytochrome o ubiquinol oxidase subunit II 0.70 OKFHMN_08370 cyoC cytochrome o ubiquinol oxidase subunit III — —
Escherichia coli BW25113 0.54 b0432 cyoA cytochrome o ubiquinol oxidase subunit II (NCBI) 0.70 b0430 cyoC cytochrome o ubiquinol oxidase subunit III (NCBI) 0.92 4
Escherichia coli ECRC101 0.54 MCAODC_27585 cyoA cytochrome o ubiquinol oxidase subunit II 0.70 MCAODC_27595 cyoC cytochrome o ubiquinol oxidase subunit III — —
Escherichia coli BL21 0.54 ECD_00383 cytochrome o ubiquinol oxidase subunit II 0.70 ECD_00381 cytochrome o ubiquinol oxidase subunit III 0.91 2
Escherichia coli HS(pFamp)R (ATCC 700891) 0.54 OHPLBJKB_03241 Cytochrome bo(3) ubiquinol oxidase subunit 2 0.70 OHPLBJKB_03243 Cytochrome bo(3) ubiquinol oxidase subunit 3 0.83 5
Escherichia coli ECOR27 0.54 NOLOHH_01295 cyoA cytochrome o ubiquinol oxidase subunit II 0.70 NOLOHH_01305 cyoC cytochrome o ubiquinol oxidase subunit III low > 57
Escherichia coli ECRC62 0.54 BNILDI_22710 cyoA cytochrome o ubiquinol oxidase subunit II 0.70 BNILDI_22720 cyoC cytochrome o ubiquinol oxidase subunit III — —
Burkholderia phytofirmans PsJN 0.53 BPHYT_RS24915 ubiquinol oxidase subunit II 0.55 BPHYT_RS24925 cytochrome O ubiquinol oxidase low > 109
Serratia liquefaciens MT49 0.53 IAI46_04985 cytochrome o ubiquinol oxidase subunit II 0.67 IAI46_04975 cytochrome o ubiquinol oxidase subunit III 0.88 1
Shewanella loihica PV-4 0.53 Shew_0366 ubiquinol oxidase, subunit II (RefSeq) 0.60 Shew_0368 cytochrome c oxidase, subunit III (RefSeq) low > 60
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.53 GFF4346 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) 0.70 GFF4344 Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-) 0.72 4
Rahnella sp. WP5 0.53 EX31_RS22220 cytochrome o ubiquinol oxidase subunit II 0.70 EX31_RS22210 cytochrome o ubiquinol oxidase subunit III 0.94 4
Klebsiella michiganensis M5al 0.53 BWI76_RS06495 cytochrome ubiquinol oxidase subunit II 0.73 BWI76_RS06485 cytochrome o ubiquinol oxidase subunit III 0.73 2
Enterobacter sp. TBS_079 0.53 MPMX20_01023 Cytochrome bo(3) ubiquinol oxidase subunit 2 0.64 MPMX20_01021 Cytochrome bo(3) ubiquinol oxidase subunit 3 0.78 3
Enterobacter asburiae PDN3 0.53 EX28DRAFT_2539 cytochrome o ubiquinol oxidase subunit II 0.70 EX28DRAFT_2541 cytochrome o ubiquinol oxidase, subunit III 0.84 4
Paraburkholderia graminis OAS925 0.52 ABIE53_005340 cytochrome o ubiquinol oxidase subunit 2 0.58 ABIE53_005342 cytochrome o ubiquinol oxidase subunit 3 low > 113
Alteromonas macleodii MIT1002 0.52 MIT1002_03929 Ubiquinol oxidase subunit 2 precursor 0.59 MIT1002_03927 Cytochrome o ubiquinol oxidase subunit 3 low > 70
Paraburkholderia bryophila 376MFSha3.1 0.50 H281DRAFT_03426 cytochrome bo3 quinol oxidase subunit 2 (EC 1.10.3.-) 0.56 H281DRAFT_03428 cytochrome bo3 quinol oxidase subunit 3 (EC 1.10.3.-) low > 103
Caulobacter crescentus NA1000 Δfur 0.49 CCNA_01851 quinol cytochrome oxidase polypeptide II 0.50 CCNA_01849 quinol cytochrome oxidase polypeptide III low > 67
Caulobacter crescentus NA1000 0.49 CCNA_01851 quinol cytochrome oxidase polypeptide II 0.50 CCNA_01849 quinol cytochrome oxidase polypeptide III 0.96 2
Shewanella sp. ANA-3 0.49 Shewana3_4031 ubiquinol oxidase, subunit II (RefSeq) 0.61 Shewana3_4033 cytochrome c oxidase, subunit III (RefSeq) low > 73
Dyella japonica UNC79MFTsu3.2 0.47 ABZR86_RS07625 ubiquinol oxidase subunit II 0.54 ABZR86_RS07615 cytochrome o ubiquinol oxidase subunit III 0.81 3
Herbaspirillum seropedicae SmR1 0.45 HSERO_RS12320 cytochrome O ubiquinol oxidase 0.55 HSERO_RS12310 cytochrome O ubiquinol oxidase — —
Acinetobacter radioresistens SK82 0.43 MPMX26_01162 Cytochrome bo(3) ubiquinol oxidase subunit 2 0.53 MPMX26_01160 Cytochrome bo(3) ubiquinol oxidase subunit 3 0.87 5
Acidovorax sp. GW101-3H11 0.41 Ac3H11_3141 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) 0.53 Ac3H11_3143 Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-) — —

Not shown: 0 genomes with orthologs for PS417_23390 only; 13 genomes with orthologs for PS417_23380 only