Conservation of cofitness between GFF4099 and GFF4289 in Hydrogenophaga sp. GW460-11-11-14-LB1

54 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF4099 Fumarate hydratase class I, aerobic (EC 4.2.1.2) 1.0 GFF4289 Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4) 0.64 11
Acidovorax sp. GW101-3H11 0.92 Ac3H11_941 Fumarate hydratase class I, aerobic (EC 4.2.1.2) 0.68 Ac3H11_573 Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4)
Variovorax sp. OAS795 0.91 ABID97_RS17550 fumarate hydratase 0.66 ABID97_RS15360 GTP-binding protein 0.25 80
Variovorax sp. SCN45 0.91 GFF483 Fumarate hydratase class I, aerobic (EC 4.2.1.2) 0.65 GFF1202 Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4) low > 127
Herbaspirillum seropedicae SmR1 0.82 HSERO_RS07760 fumarate hydratase 0.37 HSERO_RS15570 sulfate adenylyltransferase
Cupriavidus basilensis FW507-4G11 0.78 RR42_RS13905 fumarate hydratase 0.36 RR42_RS16250 sulfate adenylyltransferase low > 128
Ralstonia solanacearum PSI07 0.78 RPSI07_RS14865 fumarate hydratase 0.36 RPSI07_RS12795 sulfate adenylyltransferase subunit 1 0.47 75
Paraburkholderia bryophila 376MFSha3.1 0.77 H281DRAFT_04956 fumarase, class I, homodimeric 0.38 H281DRAFT_00118 sulfate adenylyltransferase subunit 1
Burkholderia phytofirmans PsJN 0.77 BPHYT_RS06985 fumarate hydratase 0.37 BPHYT_RS04745 sulfate adenylyltransferase low > 109
Paraburkholderia graminis OAS925 0.77 ABIE53_001662 fumarate hydratase class I 0.38 ABIE53_001230 sulfate adenylyltransferase subunit 1 low > 113
Ralstonia solanacearum GMI1000 0.77 RS_RS09830 fumarate hydratase 0.36 RS_RS12150 sulfate adenylyltransferase subunit 1 0.38 28
Ralstonia sp. UNC404CL21Col 0.77 ABZR87_RS14375 fumarate hydratase 0.36 ABZR87_RS00190 sulfate adenylyltransferase subunit 1 low > 80
Ralstonia solanacearum UW163 0.76 UW163_RS11265 fumarate hydratase 0.36 UW163_RS09090 sulfate adenylyltransferase subunit 1
Ralstonia solanacearum IBSBF1503 0.76 RALBFv3_RS02460 fumarate hydratase 0.36 RALBFv3_RS04580 sulfate adenylyltransferase subunit 1
Paraburkholderia sabiae LMG 24235 0.76 QEN71_RS23780 fumarate hydratase 0.38 QEN71_RS25235 sulfate adenylyltransferase subunit 1 low > 153
Castellaniella sp019104865 MT123 0.73 ABCV34_RS09450 fumarate hydratase 0.37 ABCV34_RS14120 GTP-binding protein low > 48
Dechlorosoma suillum PS 0.72 Dsui_2001 hydro-lyase, Fe-S type, tartrate/fumarate subfamily,hydro-lyase family enzyme, Fe-S type, tartrate/fumarate subfamily 0.38 Dsui_1982 sulfate adenylyltransferase, large subunit
Shewanella loihica PV-4 0.67 Shew_1904 tartrate/fumarate subfamily Fe-S type hydro-lyase alpha subunit (RefSeq) 0.34 Shew_1423 sulfate adenylyltransferase, large subunit (RefSeq)
Kangiella aquimarina DSM 16071 0.67 B158DRAFT_1342 fumarase, class I, homodimeric (EC 4.2.1.2) 0.33 B158DRAFT_2361 sulfate adenylyltransferase, large subunit
Shewanella amazonensis SB2B 0.66 Sama_1688 fumarate hydratase, class I, anaerobic, putative (RefSeq) 0.38 Sama_2890 Sulfate adenylyltransferase (RefSeq)
Shewanella oneidensis MR-1 0.66 SO2222 fumarate hydratase, class I, anaerobic, putative (NCBI ptt file) 0.31 SO3726 cysN sulfate adenylyltransferase, subunit 1 (NCBI ptt file)
Alteromonas macleodii MIT1002 0.65 MIT1002_02009 Fumarate hydratase class I, anaerobic 0.36 MIT1002_01271 Sulfate adenylyltransferase subunit 1
Shewanella sp. ANA-3 0.65 Shewana3_2302 fumarase (RefSeq) 0.32 Shewana3_0864 cysN sulfate adenylyltransferase subunit 1 (RefSeq)
Vibrio cholerae E7946 ATCC 55056 0.64 CSW01_06585 fumarate hydratase 0.33 CSW01_12955 sulfate adenylyltransferase low > 62
Enterobacter asburiae PDN3 0.20 EX28DRAFT_1609 hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region/hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region 0.36 EX28DRAFT_2847 sulfate adenylyltransferase, large subunit low > 76
Escherichia coli ECOR27 0.20 NOLOHH_18150 fumB class I fumarate hydratase 0.36 NOLOHH_12260 cysN sulfate adenylyltransferase subunit CysN low > 57
Escherichia coli ECRC102 0.20 NIAGMN_10370 fumB class I fumarate hydratase 0.36 NIAGMN_18215 cysN sulfate adenylyltransferase subunit CysN
Escherichia coli Nissle 1917 0.20 ECOLIN_RS09000 class I fumarate hydratase 0.36 ECOLIN_RS15380 sulfate adenylyltransferase subunit CysN low > 52
Escherichia coli ECOR38 0.20 HEPCGN_06020 fumB class I fumarate hydratase 0.36 HEPCGN_19625 cysN sulfate adenylyltransferase subunit CysN low > 85
Escherichia coli BL21 0.20 ECD_01581 fumarate hydratase (fumarase A), aerobic Class I 0.36 ECD_02601 sulfate adenylyltransferase, subunit 1 low > 60
Escherichia coli ECRC62 0.20 BNILDI_16940 fumB class I fumarate hydratase 0.36 BNILDI_10810 cysN sulfate adenylyltransferase subunit CysN
Escherichia fergusonii Becca 0.20 EFB2_02380 Fumarate hydratase class I, aerobic 0.36 EFB2_01159 Sulfate adenylyltransferase subunit 1 low > 86
Enterobacter sp. TBS_079 0.20 MPMX20_02021 Fumarate hydratase class I, aerobic 0.35 MPMX20_03637 Sulfate adenylyltransferase subunit 1 low > 85
Escherichia coli ECRC101 0.20 OKFHMN_12525 fumB class I fumarate hydratase 0.36 OKFHMN_20445 cysN sulfate adenylyltransferase subunit CysN
Escherichia coli BW25113 0.20 b1612 fumA fumarate hydratase (fumarase A), aerobic Class I (NCBI) 0.36 b2751 cysN sulfate adenylyltransferase subunit 1 (NCBI) low > 76
Rhizobium sp. OAE497 0.20 ABIE40_RS10550 fumarate hydratase 0.34 ABIE40_RS04465 sulfate adenylyltransferase subunit CysN low > 107
Escherichia coli ECRC99 0.20 KEDOAH_15640 fumB class I fumarate hydratase 0.36 KEDOAH_07695 cysN sulfate adenylyltransferase subunit CysN
Escherichia coli ECRC98 0.20 JDDGAC_16160 fumB class I fumarate hydratase 0.36 JDDGAC_24110 cysN sulfate adenylyltransferase subunit CysN
Escherichia coli HS(pFamp)R (ATCC 700891) 0.20 OHPLBJKB_03922 Fumarate hydratase class I, anaerobic 0.36 OHPLBJKB_00982 Sulfate adenylyltransferase subunit 1 low > 73
Escherichia coli ECRC101 0.20 MCAODC_03035 fumB class I fumarate hydratase 0.36 MCAODC_10970 cysN sulfate adenylyltransferase subunit CysN
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.19 GFF1477 Fumarate hydratase class I, anaerobic (EC 4.2.1.2) 0.36 GFF4799 Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4) low > 78
Bacteroides thetaiotaomicron VPI-5482 0.19 BT2256 fumarate hydratase class I, anaerobic (NCBI ptt file) 0.33 BT0415 sulfate adenylyltransferase subunit 1/adenylylsulfate kinase (NCBI ptt file)
Klebsiella michiganensis M5al 0.19 BWI76_RS08450 fumarate hydratase 0.36 BWI76_RS22695 sulfate adenylyltransferase low > 92
Serratia liquefaciens MT49 0.19 IAI46_21370 fumarate hydratase 0.36 IAI46_03720 sulfate adenylyltransferase subunit CysN low > 86
Parabacteroides merdae CL09T00C40 0.19 HMPREF1078_RS17710 fumarate hydratase 0.33 HMPREF1078_RS01710 sulfate adenylyltransferase subunit CysN
Rahnella sp. WP5 0.19 EX31_RS01160 fumarate hydratase 0.35 EX31_RS07875 sulfate adenylyltransferase subunit CysN low > 89
Bacteroides stercoris CC31F 0.19 HMPREF1181_RS09470 fumarate hydratase 0.33 HMPREF1181_RS04300 sulfate adenylyltransferase subunit CysN
Bacteroides ovatus ATCC 8483 0.19 BACOVA_03087 hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 0.33 BACOVA_01769 putative sulfate adenylyltransferase subunit 1
Erwinia tracheiphila SCR3 0.19 LU632_RS01205 class I fumarate hydratase FumA 0.34 LU632_RS06430 cysN sulfate adenylyltransferase subunit CysN low > 74
Phocaeicola vulgatus CL09T03C04 0.19 HMPREF1058_RS13805 fumarate hydratase 0.33 HMPREF1058_RS02940 sulfate adenylyltransferase subunit CysN
Dickeya dadantii 3937 0.19 DDA3937_RS04540 fumarate hydratase 0.35 DDA3937_RS16920 sulfate adenylyltransferase subunit CysN low > 74
Dickeya dianthicola ME23 0.19 DZA65_RS04420 fumarate hydratase 0.35 DZA65_RS18065 sulfate adenylyltransferase subunit CysN low > 75
Pectobacterium carotovorum WPP14 0.18 HER17_RS17120 fumarate hydratase 0.35 HER17_RS04290 sulfate adenylyltransferase subunit CysN low > 75
Dickeya dianthicola 67-19 0.18 HGI48_RS04500 fumarate hydratase 0.35 HGI48_RS16990 sulfate adenylyltransferase subunit CysN low > 71
Pantoea sp. MT58 0.18 IAI47_20435 fumarate hydratase 0.35 IAI47_04185 sulfate adenylyltransferase subunit CysN low > 76

Not shown: 30 genomes with orthologs for GFF4099 only; 7 genomes with orthologs for GFF4289 only