| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 1.0 | GFF678 | | Acetyl-CoA acetyltransferase (EC 2.3.1.9) @ Beta-ketoadipyl CoA thiolase (EC 2.3.1.-) | 1.0 | GFF4252 | | FIG000557: hypothetical protein co-occurring with RecR | 0.56 | 2 |
| Variovorax sp. SCN45 | 0.89 | GFF2232 | | Acetyl-CoA acetyltransferase (EC 2.3.1.9) @ 3-oxoadipyl-CoA thiolase (EC 2.3.1.174) | 0.92 | GFF1109 | | Nucleoid-associated protein YaaK | — | — |
| Variovorax sp. OAS795 | 0.88 | ABID97_RS24190 | | 3-oxoadipyl-CoA thiolase | 0.92 | ABID97_RS14695 | | YbaB/EbfC family nucleoid-associated protein | — | — |
| Acidovorax sp. GW101-3H11 | 0.88 | Ac3H11_3920 | | Acetyl-CoA acetyltransferase (EC 2.3.1.9) @ Beta-ketoadipyl CoA thiolase (EC 2.3.1.-) | 0.96 | Ac3H11_472 | | FIG000557: hypothetical protein co-occurring with RecR | — | — |
| Ralstonia sp. UNC404CL21Col | 0.81 | ABZR87_RS15790 | | 3-oxoadipyl-CoA thiolase | 0.70 | ABZR87_RS10800 | | YbaB/EbfC family nucleoid-associated protein | low | > 80 |
| Ralstonia solanacearum IBSBF1503 | 0.81 | RALBFv3_RS03860 | | 3-oxoadipyl-CoA thiolase | 0.68 | RALBFv3_RS15160 | | nucleoid-associated protein, YbaB/EbfC family | — | — |
| Ralstonia solanacearum UW163 | 0.81 | UW163_RS09810 | | 3-oxoadipyl-CoA thiolase | 0.68 | UW163_RS12630 | | nucleoid-associated protein, YbaB/EbfC family | — | — |
| Ralstonia solanacearum PSI07 | 0.80 | RPSI07_RS13370 | | 3-oxoadipyl-CoA thiolase | 0.68 | RPSI07_RS18215 | | YbaB/EbfC family nucleoid-associated protein | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.79 | RR42_RS35915 | | beta-ketoadipyl CoA thiolase | 0.71 | RR42_RS13280 | | hypothetical protein | — | — |
| Ralstonia solanacearum GMI1000 | 0.79 | RS_RS11305 | | 3-oxoadipyl-CoA thiolase | 0.68 | RS_RS05975 | | YbaB/EbfC family nucleoid-associated protein | — | — |
| Paraburkholderia graminis OAS925 | 0.77 | ABIE53_005177 | | acetyl-CoA acyltransferase | 0.73 | ABIE53_002047 | | DNA-binding YbaB/EbfC family protein | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.77 | H281DRAFT_01504 | | 3-oxoadipyl-CoA thiolase | 0.73 | H281DRAFT_00833 | | hypothetical protein | — | — |
| Burkholderia phytofirmans PsJN | 0.77 | BPHYT_RS17345 | | bifunctional thiolase PaaJ: 3-oxo-5,6-didehydrosuberyl-CoA thiolase (EC 2.3.1.223); 3-oxoadipyl-CoA thiolase (EC 2.3.1.174) (from data) | 0.74 | BPHYT_RS09060 | | hypothetical protein | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.76 | QEN71_RS27505 | | 3-oxoadipyl-CoA thiolase | 0.73 | QEN71_RS22290 | | YbaB/EbfC family nucleoid-associated protein | — | — |
| Herbaspirillum seropedicae SmR1 | 0.75 | HSERO_RS19990 | | acetyl-CoA acetyltransferase | 0.77 | HSERO_RS18365 | | hypothetical protein | low | > 78 |
| Agrobacterium fabrum C58 | 0.74 | Atu4549 | | beta-ketoadipyl CoA thiolase | 0.39 | Atu0095 | | hypothetical protein | low | > 89 |
| Klebsiella michiganensis M5al | 0.70 | BWI76_RS16135 | | acetyl-CoA acetyltransferase | 0.51 | BWI76_RS06825 | | nucleoid-associated protein, YbaB/EbfC family | — | — |
| Marinobacter adhaerens HP15 | 0.70 | HP15_2695 | | Beta-ketoadipyl CoA thiolase (EC 2.3.1.-) (from data) | 0.54 | HP15_1884 | | protein belonging to uncharacterized protein family UPF0133 | — | — |
| Sinorhizobium meliloti 1021 | 0.70 | SM_b20589 | | beta-ketoadipyl CoA thiolase | 0.37 | SMc02906 | | hypothetical protein | low | > 103 |
| Azospirillum sp. SherDot2 | 0.70 | MPMX19_05859 | | Beta-ketoadipyl-CoA thiolase | 0.31 | MPMX19_02194 | | Nucleoid-associated protein YbaB | — | — |
| Rhizobium sp. OAE497 | 0.70 | ABIE40_RS19550 | | 3-oxoadipyl-CoA thiolase | 0.35 | ABIE40_RS00285 | | YbaB/EbfC family nucleoid-associated protein | — | — |
| Pseudomonas putida KT2440 | 0.69 | PP_3280 | | 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase | 0.61 | PP_4268 | | nucleoid-associated broad specificity regulator | low | > 96 |
| Acinetobacter radioresistens SK82 | 0.69 | MPMX26_01701 | | Beta-ketoadipyl-CoA thiolase | 0.48 | MPMX26_01644 | | Nucleoid-associated protein YbaB | low | > 36 |
| Magnetospirillum magneticum AMB-1 | 0.68 | AMB_RS13850 | | 3-oxoadipyl-CoA thiolase | 0.36 | AMB_RS20750 | | YbaB/EbfC family nucleoid-associated protein | low | > 64 |
| Serratia liquefaciens MT49 | 0.68 | IAI46_16165 | | 3-oxoadipyl-CoA thiolase | 0.48 | IAI46_05235 | | YbaB/EbfC family nucleoid-associated protein | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.68 | Psyr_4011 | | Thiolase | 0.58 | Psyr_1826 | | Conserved hypothetical protein 103 | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.68 | Psyr_4011 | | Thiolase | 0.58 | Psyr_1826 | | Conserved hypothetical protein 103 | — | — |
| Phaeobacter inhibens DSM 17395 | 0.67 | PGA1_c04090 | | beta-ketoadipyl-CoA thiolase PaaJ | 0.34 | PGA1_c30280 | | DNA-binding protein, YbaB/EbfC family | low | > 62 |
| Pseudomonas fluorescens GW456-L13 | 0.67 | PfGW456L13_2430 | | Acetyl-CoA acetyltransferase (EC 2.3.1.9) @ Beta-ketoadipyl CoA thiolase (EC 2.3.1.-) | 0.55 | PfGW456L13_4076 | | FIG000557: hypothetical protein co-occurring with RecR | — | — |
| Pseudomonas sp. RS175 | 0.67 | PFR28_00622 | | Beta-ketoadipyl-CoA thiolase | 0.55 | PFR28_01075 | | Nucleoid-associated protein YbaB | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.66 | AO353_17205 | | beta-ketoadipyl CoA thiolase | 0.54 | AO353_00680 | | nucleoid-associated protein | — | — |
| Rhodopseudomonas palustris CGA009 | 0.66 | TX73_002660 | | 3-oxoadipyl-CoA thiolase | 0.37 | TX73_003190 | | YbaB/EbfC family nucleoid-associated protein | low | > 86 |
| Escherichia coli BW25113 | 0.66 | b1397 | paaJ | acetyl-CoA acetyltransferase (NCBI) | 0.62 | b0471 | ybaB | hypothetical protein (NCBI) | low | > 76 |
| Pseudomonas fluorescens SBW25-INTG | 0.66 | PFLU_RS06735 | | 3-oxoadipyl-CoA thiolase | 0.55 | PFLU_RS22425 | | YbaB/EbfC family nucleoid-associated protein | — | — |
| Pseudomonas fluorescens SBW25 | 0.66 | PFLU_RS06735 | | 3-oxoadipyl-CoA thiolase | 0.55 | PFLU_RS22425 | | YbaB/EbfC family nucleoid-associated protein | low | > 109 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.66 | OHPLBJKB_02314 | | 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase | 0.62 | OHPLBJKB_03203 | | Nucleoid-associated protein YbaB | — | — |
| Escherichia coli ECOR27 | 0.66 | NOLOHH_19445 | paaJ | bifunctional 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase | 0.62 | NOLOHH_01090 | ybaB | YbaB/EbfC family nucleoid-associated protein | — | — |
| Escherichia coli ECRC62 | 0.65 | BNILDI_17900 | paaJ | bifunctional 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase | 0.62 | BNILDI_22510 | ybaB | YbaB/EbfC family nucleoid-associated protein | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.65 | AO356_04930 | | beta-ketoadipyl CoA thiolase | 0.54 | AO356_02505 | | nucleoid-associated protein | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.65 | Pf1N1B4_3234 | | Beta-ketoadipyl CoA thiolase (EC 2.3.1.-) | 0.55 | Pf1N1B4_3863 | | FIG000557: hypothetical protein co-occurring with RecR | — | — |
| Pseudomonas simiae WCS417 | 0.64 | PS417_06710 | | beta-ketoadipyl CoA thiolase | 0.55 | PS417_20810 | | hypothetical protein | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.64 | Pf6N2E2_2835 | | Beta-ketoadipyl CoA thiolase (EC 2.3.1.-) | 0.54 | Pf6N2E2_2327 | | FIG000557: hypothetical protein co-occurring with RecR | — | — |
| Dinoroseobacter shibae DFL-12 | 0.64 | Dshi_3817 | | beta-ketoadipyl CoA thiolase (RefSeq) | 0.39 | Dshi_0649 | | hypothetical protein (RefSeq) | low | > 64 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.52 | CA264_17720 | | beta-ketoadipyl CoA thiolase | 0.31 | CA264_04550 | | nucleoid-associated protein, YbaB/EbfC family | low | > 74 |
| Dickeya dianthicola 67-19 | 0.37 | HGI48_RS00970 | | acetyl-CoA C-acyltransferase FadA | 0.61 | HGI48_RS05835 | | YbaB/EbfC family nucleoid-associated protein | — | — |
| Dickeya dadantii 3937 | 0.37 | DDA3937_RS20255 | | acetyl-CoA C-acyltransferase FadA | 0.61 | DDA3937_RS05785 | | YbaB/EbfC family nucleoid-associated protein | — | — |
| Dickeya dianthicola ME23 | 0.37 | DZA65_RS01030 | | acetyl-CoA C-acyltransferase FadA | 0.61 | DZA65_RS06160 | | YbaB/EbfC family nucleoid-associated protein | — | — |
| Shewanella amazonensis SB2B | 0.37 | Sama_0031 | fadA | Acetyl-CoA C-acyltransferase (EC 2.3.1.16) (from data) | 0.60 | Sama_1311 | | hypothetical protein (RefSeq) | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.36 | GFF272 | | 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) | 0.62 | GFF4389 | | FIG000557: hypothetical protein co-occurring with RecR | — | — |
| Shewanella oneidensis MR-1 | 0.36 | SO0020 | fadA | fatty oxidation complex, beta subunit (NCBI ptt file) | 0.55 | SO2014 | | conserved hypothetical protein TIGR00103 (NCBI ptt file) | low | > 76 |
| Escherichia coli ECRC101 | 0.36 | OKFHMN_14250 | fadA | acetyl-CoA C-acyltransferase FadA | 0.62 | OKFHMN_08160 | ybaB | YbaB/EbfC family nucleoid-associated protein | — | — |
| Escherichia coli ECRC99 | 0.36 | KEDOAH_13900 | fadA | acetyl-CoA C-acyltransferase FadA | 0.62 | KEDOAH_19805 | ybaB | YbaB/EbfC family nucleoid-associated protein | — | — |
| Escherichia coli ECRC102 | 0.36 | NIAGMN_12005 | fadA | acetyl-CoA C-acyltransferase FadA | 0.62 | NIAGMN_06215 | ybaB | YbaB/EbfC family nucleoid-associated protein | — | — |
| Escherichia coli ECRC101 | 0.36 | MCAODC_04755 | fadA | acetyl-CoA C-acyltransferase FadA | 0.62 | MCAODC_27385 | ybaB | YbaB/EbfC family nucleoid-associated protein | — | — |
| Escherichia coli ECRC98 | 0.36 | JDDGAC_17875 | fadA | acetyl-CoA C-acyltransferase FadA | 0.62 | JDDGAC_11810 | ybaB | YbaB/EbfC family nucleoid-associated protein | — | — |
| Pectobacterium carotovorum WPP14 | 0.36 | HER17_RS20555 | | acetyl-CoA C-acyltransferase FadA | 0.49 | HER17_RS15700 | | YbaB/EbfC family nucleoid-associated protein | — | — |
| Shewanella sp. ANA-3 | 0.36 | Shewana3_0023 | fadA | Acetyl-CoA C-acyltransferase (EC 2.3.1.16) (from data) | 0.57 | Shewana3_2445 | | hypothetical protein (RefSeq) | low | > 73 |
Not shown: 2 genomes with orthologs for GFF678 only; 31 genomes with orthologs for GFF4252 only