Conservation of cofitness between GFF2802 and GFF4162 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

55 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF2802 Cell volume regulation protein A 1.0 GFF4162 DNA repair protein RecN 0.53 2
Enterobacter sp. TBS_079 0.90 MPMX20_02697 K(+)/H(+) antiporter NhaP2 0.88 MPMX20_03486 DNA repair protein RecN low > 85
Klebsiella michiganensis M5al 0.88 BWI76_RS17725 K+/H+ antiporter 0.85 BWI76_RS21560 DNA repair protein RecN low > 92
Escherichia coli ECOR27 0.87 NOLOHH_20710 nhaP2 potassium/proton antiporter 0.92 NOLOHH_12815 recN DNA repair protein RecN low > 75
Escherichia coli ECRC101 0.87 MCAODC_21870 nhaP2 potassium/proton antiporter 0.92 MCAODC_11670 recN DNA repair protein RecN low > 87
Escherichia coli ECOR38 0.87 HEPCGN_24795 nhaP2 potassium/proton antiporter 0.92 HEPCGN_20265 recN DNA repair protein RecN low > 87
Escherichia coli ECRC98 0.87 JDDGAC_06195 nhaP2 potassium/proton antiporter 0.92 JDDGAC_24810 recN DNA repair protein RecN low > 86
Enterobacter asburiae PDN3 0.87 EX28DRAFT_0768 NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain 0.88 EX28DRAFT_2719 DNA repair protein RecN low > 76
Escherichia fergusonii Becca 0.87 EFB2_02741 K(+)/H(+) antiporter NhaP2 0.93 EFB2_01277 DNA repair protein RecN low > 86
Escherichia coli ECRC100 0.87 OKFHMN_28315 nhaP2 potassium/proton antiporter 0.92 OKFHMN_21145 recN DNA repair protein RecN low > 80
Escherichia coli ECRC99 0.87 KEDOAH_25315 nhaP2 potassium/proton antiporter 0.92 KEDOAH_07075 recN DNA repair protein RecN — —
Escherichia coli ECRC102 0.87 NIAGMN_27920 nhaP2 potassium/proton antiporter 0.92 NIAGMN_18915 recN DNA repair protein RecN — —
Escherichia coli Nissle 1917 0.87 ECOLIN_RS07195 potassium/proton antiporter 0.92 ECOLIN_RS14775 DNA repair protein RecN low > 55
Escherichia coli ECRC62 0.87 BNILDI_18875 nhaP2 potassium/proton antiporter 0.92 BNILDI_11620 recN DNA repair protein RecN low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.87 OHPLBJKB_02497 K(+)/H(+) antiporter NhaP2 0.92 OHPLBJKB_01091 DNA repair protein RecN low > 73
Escherichia coli BW25113 0.87 b1191 b1191 orf, hypothetical protein (VIMSS) 0.92 b2616 recN recombination and repair protein (NCBI) low > 76
Escherichia coli BL21 0.87 ECD_01166 putative cation/proton antiporter 0.92 ECD_02504 recombination and repair protein low > 61
Erwinia tracheiphila SCR3 0.78 LU632_RS13040 potassium/proton antiporter 0.71 LU632_RS16985 recN DNA repair protein RecN low > 74
Pantoea sp. MT58 0.76 IAI47_08915 potassium/proton antiporter 0.78 IAI47_04810 DNA repair protein RecN low > 76
Serratia liquefaciens MT49 0.74 IAI46_09585 potassium/proton antiporter 0.77 IAI46_19635 DNA repair protein RecN low > 86
Rahnella sp. WP5 0.73 EX31_RS17920 potassium/proton antiporter 0.75 EX31_RS21760 DNA repair protein RecN low > 89
Pseudomonas fluorescens FW300-N2E2 0.67 Pf6N2E2_3690 Na(+)/H(+) antiporter 0.39 Pf6N2E2_3370 DNA repair protein RecN low > 103
Pseudomonas sp. RS175 0.66 PFR28_05045 K(+)/H(+) antiporter NhaP2 0.39 PFR28_00071 DNA repair protein RecN low > 88
Pseudomonas syringae pv. syringae B728a 0.66 Psyr_0502 potassium/proton antiporter, CPA1 family 0.39 Psyr_4197 DNA replication and repair protein RecN low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.66 Psyr_0502 potassium/proton antiporter, CPA1 family 0.39 Psyr_4197 DNA replication and repair protein RecN low > 86
Pseudomonas sp. S08-1 0.66 OH686_09795 K(+)/H(+) antiporter NhaP2 0.40 OH686_17050 DNA repair protein RecN low > 80
Pseudomonas stutzeri RCH2 0.65 Psest_0398 NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain 0.39 Psest_0962 DNA repair protein RecN low > 67
Pseudomonas fluorescens FW300-N2E3 0.65 AO353_12780 potassium:proton antiporter 0.38 AO353_05660 DNA repair protein RecN low > 101
Pseudomonas simiae WCS417 0.65 PS417_02150 potassium/proton antiporter 0.39 PS417_24070 recombination and repair protein low > 88
Pseudomonas fluorescens FW300-N1B4 0.65 Pf1N1B4_1496 Na(+)/H(+) antiporter 0.39 Pf1N1B4_1178 DNA repair protein RecN low > 87
Pseudomonas fluorescens SBW25 0.65 PFLU_RS02205 potassium/proton antiporter 0.38 PFLU_RS25910 DNA repair protein RecN low > 109
Pseudomonas fluorescens SBW25-INTG 0.65 PFLU_RS02205 potassium/proton antiporter 0.38 PFLU_RS25910 DNA repair protein RecN low > 109
Pseudomonas putida KT2440 0.64 PP_5066 K(+)/H(+) antiporter NhaP2 0.38 PP_4729 factor used in recombination and DNA repair low > 96
Pseudomonas fluorescens FW300-N2C3 0.64 AO356_09040 potassium:proton antiporter 0.38 AO356_07510 DNA repair protein RecN low > 104
Pseudomonas fluorescens GW456-L13 0.63 PfGW456L13_229 Na(+)/H(+) antiporter 0.40 PfGW456L13_5106 DNA repair protein RecN low > 87
Vibrio cholerae E7946 ATCC 55056 0.60 CSW01_13645 K+/H+ antiporter NhaP2 0.54 CSW01_04395 DNA repair protein RecN low > 62
Shewanella oneidensis MR-1 0.55 SO3747 sodium/hydrogen exchanger family/TrkA domain protein (NCBI ptt file) 0.56 SO3462 recN DNA repair protein RecN (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.54 Shewana3_0847 potassium/proton antiporter (RefSeq) 0.56 Shewana3_1104 recombination and repair protein (RefSeq) low > 73
Shewanella amazonensis SB2B 0.52 Sama_0729 potassium/proton antiporter (RefSeq) 0.55 Sama_1026 recombination and repair protein (RefSeq) low > 62
Marinobacter adhaerens HP15 0.39 HP15_3829 sodium/hydrogen exchanger 0.40 HP15_3084 DNA repair protein RecN low > 73
Cupriavidus basilensis FW507-4G11 0.36 RR42_RS15170 peptidase 0.34 RR42_RS05910 DNA repair protein low > 128
Azospirillum brasilense Sp245 0.30 AZOBR_RS21840 potassium transporter CPA 0.25 AZOBR_RS12395 DNA repair protein RecN — —
Rhodospirillum rubrum S1H 0.30 Rru_A1079 sodium/hydrogen exchanger (NCBI) 0.23 Rru_A0940 DNA repair protein RecN (NCBI) — —
Agrobacterium fabrum C58 0.30 Atu3738 potassium/proton antiporter 0.27 Atu2083 DNA repair protein RecN low > 89
Rhodopseudomonas palustris CGA009 0.30 TX73_002020 potassium/proton antiporter 0.24 TX73_018240 DNA repair protein RecN low > 86
Pontibacter actiniarum KMM 6156, DSM 19842 0.30 CA264_08580 K+/H+ antiporter 0.21 CA264_13235 DNA repair protein RecN low > 74
Magnetospirillum magneticum AMB-1 0.29 AMB_RS01100 potassium/proton antiporter 0.27 AMB_RS19520 DNA repair protein RecN — —
Azospirillum sp. SherDot2 0.29 MPMX19_01380 K(+)/H(+) antiporter NhaP 0.24 MPMX19_01601 DNA repair protein RecN low > 112
Alteromonas macleodii MIT1002 0.28 MIT1002_00850 potassium/proton antiporter 0.42 MIT1002_01443 Recombination protein N low > 70
Bacteroides ovatus ATCC 8483 0.28 BACOVA_02388 potassium/proton antiporter 0.23 BACOVA_00200 DNA repair protein RecN low > 94
Bacteroides stercoris CC31F 0.27 HMPREF1181_RS16180 potassium/proton antiporter 0.23 HMPREF1181_RS10900 DNA repair protein RecN low > 56
Bacteroides thetaiotaomicron VPI-5482 0.27 BT0685 putative Na+/H+ exchanger (NCBI ptt file) 0.24 BT1361 DNA repair protein recN (Recombination protein N) (NCBI ptt file) low > 81
Phocaeicola dorei CL03T12C01 0.27 ABI39_RS14010 potassium/proton antiporter 0.23 ABI39_RS14500 DNA repair protein RecN low > 72
Phocaeicola vulgatus CL09T03C04 0.27 HMPREF1058_RS17795 potassium/proton antiporter 0.23 HMPREF1058_RS18225 DNA repair protein RecN low > 67
Parabacteroides merdae CL09T00C40 0.26 HMPREF1078_RS05525 potassium/proton antiporter 0.25 HMPREF1078_RS02000 DNA repair protein RecN low > 61
Echinicola vietnamensis KMM 6221, DSM 17526 0.25 Echvi_2628 NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain 0.24 Echvi_2067 DNA repair protein RecN low > 79

Not shown: 1 genomes with orthologs for GFF2802 only; 44 genomes with orthologs for GFF4162 only