Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Hydrogenophaga sp. GW460-11-11-14-LB1 | 1.0 | GFF4099 | | Fumarate hydratase class I, aerobic (EC 4.2.1.2) | 1.0 | GFF3881 | | Lipoprotein NlpD | 0.72 | 4 |
Acidovorax sp. GW101-3H11 | 0.92 | Ac3H11_941 | | Fumarate hydratase class I, aerobic (EC 4.2.1.2) | 0.55 | Ac3H11_1786 | | Lipoprotein NlpD | — | — |
Variovorax sp. OAS795 | 0.91 | ABID97_RS17550 | | fumarate hydratase | 0.53 | ABID97_RS10725 | | peptidoglycan DD-metalloendopeptidase family protein | low | > 91 |
Variovorax sp. SCN45 | 0.91 | GFF483 | | Fumarate hydratase class I, aerobic (EC 4.2.1.2) | 0.56 | GFF2843 | | Murein hydrolase activator NlpD | low | > 127 |
Herbaspirillum seropedicae SmR1 | 0.82 | HSERO_RS07760 | | fumarate hydratase | 0.42 | HSERO_RS14835 | | peptidase M23 | — | — |
Cupriavidus basilensis FW507-4G11 | 0.78 | RR42_RS13905 | | fumarate hydratase | 0.45 | RR42_RS13190 | | outer membrane metallopeptidase lipoprotein nlpD | low | > 128 |
Ralstonia solanacearum PSI07 | 0.78 | RPSI07_RS14865 | | fumarate hydratase | 0.42 | RPSI07_RS18145 | | LysM peptidoglycan-binding domain-containing protein | low | > 81 |
Paraburkholderia bryophila 376MFSha3.1 | 0.77 | H281DRAFT_04956 | | fumarase, class I, homodimeric | 0.47 | H281DRAFT_00843 | | lipoprotein NlpD | — | — |
Burkholderia phytofirmans PsJN | 0.77 | BPHYT_RS06985 | | fumarate hydratase | 0.50 | BPHYT_RS09110 | | peptidase M23 | — | — |
Paraburkholderia graminis OAS925 | 0.77 | ABIE53_001662 | | fumarate hydratase class I | 0.49 | ABIE53_002056 | | lipoprotein NlpD | low | > 113 |
Ralstonia sp. UNC404CL21Col | 0.77 | ABZR87_RS14375 | | fumarate hydratase | 0.41 | ABZR87_RS10870 | | peptidoglycan DD-metalloendopeptidase family protein | low | > 80 |
Ralstonia solanacearum GMI1000 | 0.77 | RS_RS09830 | | fumarate hydratase | 0.41 | RS_RS06040 | | LysM peptidoglycan-binding domain-containing protein | low | > 80 |
Ralstonia solanacearum IBSBF1503 | 0.76 | RALBFv3_RS02460 | | fumarate hydratase | 0.42 | RALBFv3_RS15230 | | hypothetical protein | low | > 76 |
Ralstonia solanacearum UW163 | 0.76 | UW163_RS11265 | | fumarate hydratase | 0.42 | UW163_RS12695 | | hypothetical protein | — | — |
Paraburkholderia sabiae LMG 24235 | 0.76 | QEN71_RS23780 | | fumarate hydratase | 0.47 | QEN71_RS22245 | | peptidoglycan DD-metalloendopeptidase family protein | — | — |
Lysobacter sp. OAE881 | 0.73 | ABIE51_RS12620 | | fumarate hydratase | 0.29 | ABIE51_RS06500 | | peptidoglycan DD-metalloendopeptidase family protein | low | > 62 |
Castellaniella sp019104865 MT123 | 0.73 | ABCV34_RS09450 | | fumarate hydratase | 0.34 | ABCV34_RS03040 | | peptidoglycan DD-metalloendopeptidase family protein | — | — |
Dechlorosoma suillum PS | 0.72 | Dsui_2001 | | hydro-lyase, Fe-S type, tartrate/fumarate subfamily,hydro-lyase family enzyme, Fe-S type, tartrate/fumarate subfamily | 0.46 | Dsui_1970 | | metalloendopeptidase-like membrane protein | — | — |
Xanthomonas campestris pv. campestris strain 8004 | 0.72 | Xcc-8004.3506.1 | | Fumarate hydratase class I, aerobic (EC 4.2.1.2) | 0.32 | Xcc-8004.3127.1 | | Lipoprotein NlpD | — | — |
Pseudomonas fluorescens SBW25-INTG | 0.71 | PFLU_RS24270 | | fumarate hydratase | 0.34 | PFLU_RS06425 | | peptidoglycan DD-metalloendopeptidase family protein | — | — |
Pseudomonas syringae pv. syringae B728a | 0.71 | Psyr_4031 | | fumarase | 0.35 | Psyr_1373 | | Peptidoglycan-binding LysM:Peptidase M23B | — | — |
Pseudomonas fluorescens SBW25 | 0.71 | PFLU_RS24270 | | fumarate hydratase | 0.34 | PFLU_RS06425 | | peptidoglycan DD-metalloendopeptidase family protein | — | — |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.71 | Psyr_4031 | | fumarase | 0.35 | Psyr_1373 | | Peptidoglycan-binding LysM:Peptidase M23B | — | — |
Pseudomonas fluorescens FW300-N2E3 | 0.71 | AO353_03795 | | fumarate hydratase | 0.38 | AO353_16610 | | peptigoglycan-binding protein LysM | — | — |
Pseudomonas sp. RS175 | 0.71 | PFR28_03458 | | Fumarate hydratase class I, aerobic | 0.34 | PFR28_00426 | | hypothetical protein | — | — |
Pseudomonas fluorescens FW300-N2C3 | 0.71 | AO356_17810 | | fumarate hydratase | 0.33 | AO356_05890 | | peptigoglycan-binding protein LysM | — | — |
Pseudomonas stutzeri RCH2 | 0.71 | Psest_3193 | | hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region/hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region | 0.33 | Psest_2807 | | Membrane proteins related to metalloendopeptidases | — | — |
Pseudomonas putida KT2440 | 0.71 | PP_0897 | | Fumarate hydratase, class I | 0.36 | PP_1622 | | metallopeptidase, M23B subfamily | — | — |
Pseudomonas sp. S08-1 | 0.70 | OH686_18780 | | Fumarate hydratase class I, aerobic | 0.34 | OH686_18180 | | Murein hydrolase activator NlpD | — | — |
Acinetobacter radioresistens SK82 | 0.68 | MPMX26_00411 | | Fumarate hydratase class I, aerobic | 0.27 | MPMX26_01055 | | Murein hydrolase activator NlpD | low | > 36 |
Shewanella loihica PV-4 | 0.67 | Shew_1904 | | tartrate/fumarate subfamily Fe-S type hydro-lyase alpha subunit (RefSeq) | 0.29 | Shew_1212 | | peptidase M23B (RefSeq) | — | — |
Kangiella aquimarina DSM 16071 | 0.67 | B158DRAFT_1342 | | fumarase, class I, homodimeric (EC 4.2.1.2) | 0.34 | B158DRAFT_2299 | | Membrane proteins related to metalloendopeptidases | — | — |
Shewanella amazonensis SB2B | 0.66 | Sama_1688 | | fumarate hydratase, class I, anaerobic, putative (RefSeq) | 0.29 | Sama_1043 | | lipoprotein NlpD (RefSeq) | — | — |
Shewanella oneidensis MR-1 | 0.66 | SO2222 | | fumarate hydratase, class I, anaerobic, putative (NCBI ptt file) | 0.29 | SO3433 | nlpD | lipoprotein NlpD (NCBI ptt file) | — | — |
Alteromonas macleodii MIT1002 | 0.65 | MIT1002_02009 | | Fumarate hydratase class I, anaerobic | 0.33 | MIT1002_00626 | | Murein hydrolase activator NlpD precursor | — | — |
Shewanella sp. ANA-3 | 0.65 | Shewana3_2302 | | fumarase (RefSeq) | 0.30 | Shewana3_1123 | | peptidase M23B (RefSeq) | — | — |
Vibrio cholerae E7946 ATCC 55056 | 0.64 | CSW01_06585 | | fumarate hydratase | 0.29 | CSW01_02830 | | murein hydrolase activator NlpD | low | > 62 |
Klebsiella michiganensis M5al | 0.19 | BWI76_RS08450 | | fumarate hydratase | 0.32 | BWI76_RS22650 | | lipoprotein NlpD | low | > 92 |
Not shown: 47 genomes with orthologs for GFF4099 only; 0 genomes with orthologs for GFF3881 only