| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas simiae WCS417 | 1.0 | PS417_22175 | | amino acid transporter LysE | 1.0 | PS417_17010 | | AMP-binding protein | 0.20 | 7 |
| Pseudomonas fluorescens SBW25-INTG | 0.97 | PFLU_RS23800 | | amino acid transporter | 0.95 | PFLU_RS18960 | | AMP-binding protein | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.97 | PFLU_RS23800 | | amino acid transporter | 0.95 | PFLU_RS18960 | | AMP-binding protein | low | > 109 |
| Pseudomonas fluorescens FW300-N1B4 | 0.91 | Pf1N1B4_710 | | Transporter, LysE family | 0.84 | Pf1N1B4_3988 | | Acetoacetyl-CoA synthetase (EC 6.2.1.16) / Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) | low | > 87 |
| Pseudomonas fluorescens GW456-L13 | 0.89 | PfGW456L13_1780 | | Transporter, LysE family | 0.85 | PfGW456L13_2593 | | Acetoacetyl-CoA synthetase (EC 6.2.1.16) / Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.89 | AO353_03925 | | lysine transporter LysE | 0.85 | AO353_20355 | | AMP-binding protein | low | > 101 |
| Pseudomonas fluorescens FW300-N2C3 | 0.88 | AO356_05000 | | lysine transporter LysE | 0.83 | AO356_01575 | | AMP-binding protein | low | > 104 |
| Pseudomonas sp. RS175 | 0.87 | PFR28_00607 | | Arginine exporter protein ArgO | 0.81 | PFR28_01261 | | 3-[(3aS,4S,7aS)-7a-methyl-1, 5-dioxo-octahydro-1H-inden-4-yl]propanoyl:CoA ligase | low | > 88 |
| Pseudomonas putida KT2440 | 0.86 | PP_0916 | | Amino acid transporter LysE | 0.76 | PP_3458 | | Butyrate--CoA ligase | low | > 96 |
| Pseudomonas fluorescens FW300-N2E2 | 0.83 | Pf6N2E2_2850 | | Transporter, LysE family | 0.83 | Pf6N2E2_2190 | | Acetoacetyl-CoA synthetase (EC 6.2.1.16) / Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) | low | > 103 |
| Pseudomonas stutzeri RCH2 | 0.70 | Psest_1165 | | Lysine efflux permease | 0.70 | Psest_1086 | | Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II | 0.17 | 47 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.48 | DVU0593 | LysE | L-lysine exporter, putative (TIGR) | 0.42 | DVU3065 | | AMP-binding enzyme family protein (TIGR) | low | > 55 |
| Marinobacter adhaerens HP15 | 0.46 | HP15_869 | | lysine exporter protein (LYSE/YGGA) | 0.61 | HP15_999 | | acyl-CoA synthase | low | > 73 |
| Shewanella amazonensis SB2B | 0.45 | Sama_2988 | | L-lysine exporter, putative (RefSeq) | 0.51 | Sama_1904 | | AMP-binding domain protein (RefSeq) | low | > 62 |
| Shewanella loihica PV-4 | 0.45 | Shew_1845 | | lysine exporter protein LysE/YggA (RefSeq) | 0.50 | Shew_2593 | | acyl-CoA synthetase (RefSeq) | low | > 60 |
| Shewanella sp. ANA-3 | 0.44 | Shewana3_1653 | | lysine exporter protein LysE/YggA (RefSeq) | 0.49 | Shewana3_2475 | | AMP-binding domain protein (RefSeq) | low | > 73 |
| Shewanella oneidensis MR-1 | 0.44 | SO2865 | | L-lysine exporter, putative (NCBI ptt file) | 0.49 | SO1971 | | AMP-binding family protein (NCBI ptt file) | low | > 76 |
| Cupriavidus basilensis FW507-4G11 | 0.43 | RR42_RS31460 | | amino acid transporter | 0.54 | RR42_RS26915 | | AMP-binding protein | low | > 128 |
| Ralstonia sp. UNC404CL21Col | 0.42 | ABZR87_RS14020 | | LysE/ArgO family amino acid transporter | 0.55 | ABZR87_RS07325 | | AMP-binding protein | low | > 80 |
| Ralstonia solanacearum IBSBF1503 | 0.42 | RALBFv3_RS18365 | | amino acid transporter | 0.54 | RALBFv3_RS11360 | | AMP-binding protein | low | > 76 |
| Ralstonia solanacearum UW163 | 0.42 | UW163_RS20765 | | amino acid transporter | 0.54 | UW163_RS02225 | | AMP-binding protein | — | — |
| Ralstonia solanacearum PSI07 | 0.42 | RPSI07_RS03905 | | amino acid transporter | 0.53 | RPSI07_RS21845 | | AMP-binding protein | low | > 81 |
| Escherichia fergusonii Becca | 0.42 | EFB2_00983 | | Arginine exporter protein ArgO | 0.22 | EFB2_02290 | | Medium-chain fatty-acid--CoA ligase | low | > 86 |
| Escherichia coli Nissle 1917 | 0.42 | ECOLIN_RS16245 | | arginine exporter ArgO | 0.22 | ECOLIN_RS09505 | | medium-chain fatty-acid--CoA ligase | — | — |
| Escherichia coli ECOR27 | 0.42 | NOLOHH_11320 | argO | arginine exporter ArgO | 0.22 | NOLOHH_17670 | fadK | medium-chain fatty-acid--CoA ligase | — | — |
| Escherichia coli ECOR38 | 0.42 | HEPCGN_18715 | argO | arginine exporter ArgO | 0.22 | HEPCGN_05535 | fadK | medium-chain fatty-acid--CoA ligase | low | > 85 |
| Escherichia coli ECRC102 | 0.41 | NIAGMN_17175 | argO | arginine exporter ArgO | 0.22 | NIAGMN_00915 | fadK | medium-chain fatty-acid--CoA ligase | — | — |
| Escherichia coli ECRC98 | 0.41 | JDDGAC_23040 | argO | arginine exporter ArgO | 0.22 | JDDGAC_01725 | fadK | medium-chain fatty-acid--CoA ligase | — | — |
| Escherichia coli ECRC99 | 0.41 | KEDOAH_08730 | argO | arginine exporter ArgO | 0.22 | KEDOAH_00960 | fadK | medium-chain fatty-acid--CoA ligase | — | — |
| Escherichia coli ECRC101 | 0.41 | OKFHMN_19410 | argO | arginine exporter ArgO | 0.22 | OKFHMN_27150 | fadK | medium-chain fatty-acid--CoA ligase | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.41 | GFF5066 | | Arginine exporter protein ArgO | 0.56 | GFF4967 | | Acetoacetyl-CoA synthetase (EC 6.2.1.16) / Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) | low | > 90 |
| Variovorax sp. OAS795 | 0.40 | ABID97_RS23870 | | LysE/ArgO family amino acid transporter | 0.55 | ABID97_RS25135 | | AMP-binding protein | low | > 91 |
| Acinetobacter radioresistens SK82 | 0.40 | MPMX26_00290 | | Arginine exporter protein ArgO | 0.55 | MPMX26_00634 | | 3-[(3aS,4S,7aS)-7a-methyl-1, 5-dioxo-octahydro-1H-inden-4-yl]propanoyl:CoA ligase | low | > 36 |
| Desulfovibrio vulgaris Miyazaki F | 0.40 | DvMF_2124 | | Lysine exporter protein (LYSE/YGGA) (RefSeq) | 0.41 | DvMF_2357 | | AMP-binding domain protein (RefSeq) | low | > 51 |
| Ralstonia solanacearum GMI1000 | 0.39 | RS_RS10170 | | amino acid transporter | 0.54 | RS_RS02190 | | AMP-binding protein | low | > 80 |
| Mycobacterium tuberculosis H37Rv | 0.39 | Rv1986 | | Probable conserved integral membrane protein | 0.50 | Rv2505c | | Probable fatty-acid-CoA ligase FadD35 (fatty-acid-CoA synthetase) (fatty-acid-CoA synthase) | low | > 58 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.39 | GFF3018 | | Arginine exporter protein ArgO | 0.24 | GFF3540 | | Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) | low | > 78 |
| Variovorax sp. SCN45 | 0.38 | GFF2319 | | Arginine exporter protein ArgO | 0.55 | GFF2007 | | Acetoacetyl-CoA synthetase [leucine] (EC 6.2.1.16) | low | > 127 |
| Escherichia coli BW25113 | 0.38 | b2923 | argO | arginine exporter protein (NCBI) | 0.22 | b1701 | fadK | short chain acyl-CoA synthetase, anaerobic (RefSeq) | low | > 76 |
| Escherichia coli BL21 | 0.38 | ECD_02754 | | arginine transporter | 0.22 | ECD_01670 | | short chain acyl-CoA synthetase, anaerobic | — | — |
| Dickeya dadantii 3937 | 0.38 | DDA3937_RS02115 | | amino acid transporter | 0.15 | DDA3937_RS20750 | | acyl--CoA ligase | low | > 74 |
| Escherichia coli ECRC62 | 0.38 | BNILDI_09855 | argO | arginine exporter ArgO | 0.22 | BNILDI_16460 | fadK | medium-chain fatty-acid--CoA ligase | — | — |
| Azospirillum sp. SherDot2 | 0.37 | MPMX19_01758 | | Arginine exporter protein ArgO | 0.58 | MPMX19_03344 | | 3-[(3aS,4S,7aS)-7a-methyl-1, 5-dioxo-octahydro-1H-inden-4-yl]propanoyl:CoA ligase | low | > 112 |
| Acidovorax sp. GW101-3H11 | 0.36 | Ac3H11_3377 | | Transporter, LysE family | 0.53 | Ac3H11_3009 | | Acetoacetate--CoA ligase (EC 6.2.1.16) (from data) | low | > 79 |
| Dinoroseobacter shibae DFL-12 | 0.36 | Dshi_0712 | | Lysine exporter protein (LYSE/YGGA) (RefSeq) | 0.53 | Dshi_3403 | | AMP-dependent synthetase and ligase (RefSeq) | 0.31 | 29 |
| Burkholderia phytofirmans PsJN | 0.34 | BPHYT_RS07435 | | amino acid transporter | 0.54 | BPHYT_RS19375 | | AMP-binding protein | low | > 109 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.34 | H281DRAFT_04883 | | L-lysine exporter family protein LysE/ArgO | 0.55 | H281DRAFT_02398 | | fatty-acyl-CoA synthase | low | > 103 |
| Rhodanobacter sp. FW510-T8 | 0.33 | OKGIIK_01775 | | L-lysine exporter family protein LysE/ArgO | 0.54 | OKGIIK_15170 | | AMP-binding protein | low | > 52 |
| Paraburkholderia graminis OAS925 | 0.33 | ABIE53_001718 | | L-lysine exporter family protein LysE/ArgO | 0.55 | ABIE53_000249 | | fatty-acyl-CoA synthase | low | > 113 |
| Paraburkholderia sabiae LMG 24235 | 0.31 | QEN71_RS23615 | | LysE/ArgO family amino acid transporter | 0.52 | QEN71_RS29275 | | AMP-binding protein | low | > 153 |
| Alteromonas macleodii MIT1002 | 0.31 | MIT1002_00130 | | Arginine exporter protein ArgO | 0.48 | MIT1002_03360 | | Long-chain-fatty-acid--CoA ligase | low | > 70 |
Not shown: 23 genomes with orthologs for PS417_22175 only; 19 genomes with orthologs for PS417_17010 only