| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 1.0 | GFF516 | | Acyl-CoA hydrolase (EC 3.1.2.20) | 1.0 | GFF3068 | | RNA polymerase sigma-54 factor RpoN | 0.68 | 11 |
| Acidovorax sp. GW101-3H11 | 0.74 | Ac3H11_1945 | | Acyl-CoA hydrolase (EC 3.1.2.20) | 0.61 | Ac3H11_727 | | RNA polymerase sigma-54 factor RpoN | 0.37 | 49 |
| Variovorax sp. OAS795 | 0.71 | ABID97_RS05905 | | acyl-CoA thioesterase | 0.61 | ABID97_RS04780 | | RNA polymerase factor sigma-54 | — | — |
| Variovorax sp. SCN45 | 0.69 | GFF4599 | | Acyl-CoA hydrolase (EC 3.1.2.20) | 0.61 | GFF6290 | | RNA polymerase sigma-54 factor RpoN | low | > 127 |
| Ralstonia solanacearum PSI07 | 0.53 | RPSI07_RS21675 | | acyl-CoA thioesterase | 0.42 | RPSI07_RS22130 | | RNA polymerase factor sigma-54 | low | > 81 |
| Ralstonia sp. UNC404CL21Col | 0.53 | ABZR87_RS07500 | | acyl-CoA thioesterase | 0.43 | ABZR87_RS07060 | | RNA polymerase factor sigma-54 | 0.33 | 45 |
| Ralstonia solanacearum GMI1000 | 0.53 | RS_RS02365 | | acyl-CoA thioesterase | 0.42 | RS_RS02020 | | RNA polymerase sigma-54 factor | low | > 80 |
| Ralstonia solanacearum IBSBF1503 | 0.53 | RALBFv3_RS11535 | | acyl-CoA thioesterase | 0.42 | RALBFv3_RS11170 | | RNA polymerase sigma-54 factor | low | > 76 |
| Ralstonia solanacearum UW163 | 0.53 | UW163_RS02050 | | acyl-CoA thioesterase | 0.42 | UW163_RS02410 | | RNA polymerase sigma-54 factor | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.52 | QEN71_RS02095 | | acyl-CoA thioesterase | 0.40 | QEN71_RS01755 | | RNA polymerase factor sigma-54 | low | > 153 |
| Burkholderia phytofirmans PsJN | 0.52 | BPHYT_RS03270 | | acyl-CoA hydrolase | 0.40 | BPHYT_RS02905 | | RNA polymerase subunit sigma-54 | 0.22 | 58 |
| Herbaspirillum seropedicae SmR1 | 0.52 | HSERO_RS19275 | | acyl-CoA hydrolase | 0.40 | HSERO_RS19855 | | RNA polymerase subunit sigma-54 | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.51 | RR42_RS02530 | | acyl-CoA hydrolase | 0.40 | RR42_RS02085 | | RNA polymerase subunit sigma-54 | low | > 128 |
| Dechlorosoma suillum PS | 0.49 | Dsui_0322 | | acyl-CoA hydrolase | 0.40 | Dsui_0704 | | RNA polymerase sigma-54 factor | low | > 51 |
| Enterobacter sp. TBS_079 | 0.43 | MPMX20_02575 | | putative acyl-CoA thioester hydrolase | 0.31 | MPMX20_04108 | | RNA polymerase sigma-54 factor | — | — |
| Pectobacterium carotovorum WPP14 | 0.43 | HER17_RS10965 | | acyl-CoA thioester hydrolase YciA | 0.31 | HER17_RS20060 | | RNA polymerase factor sigma-54 | low | > 75 |
| Vibrio cholerae E7946 ATCC 55056 | 0.43 | CSW01_08560 | | acyl-CoA thioester hydrolase YciA | 0.29 | CSW01_12815 | | RNA polymerase sigma-54 factor | low | > 62 |
| Dickeya dadantii 3937 | 0.42 | DDA3937_RS10430 | | acyl-CoA thioester hydrolase YciA | 0.31 | DDA3937_RS01530 | | RNA polymerase factor sigma-54 | low | > 74 |
| Bosea sp. OAE506 | 0.42 | ABIE41_RS12055 | | acyl-CoA thioesterase | 0.24 | ABIE41_RS00125 | | RNA polymerase factor sigma-54 | low | > 77 |
| Enterobacter asburiae PDN3 | 0.42 | EX28DRAFT_0923 | | Acyl-CoA hydrolase | 0.32 | EX28DRAFT_3256 | | RNA polymerase, sigma 54 subunit, RpoN/SigL | — | — |
| Dickeya dianthicola ME23 | 0.42 | DZA65_RS10910 | | acyl-CoA thioester hydrolase YciA | 0.31 | DZA65_RS01510 | | RNA polymerase factor sigma-54 | low | > 75 |
| Dickeya dianthicola 67-19 | 0.42 | HGI48_RS10435 | | acyl-CoA thioester hydrolase YciA | 0.31 | HGI48_RS01445 | | RNA polymerase factor sigma-54 | low | > 71 |
| Rahnella sp. WP5 | 0.42 | EX31_RS10010 | | acyl-CoA thioester hydrolase YciA | 0.30 | EX31_RS12400 | | RNA polymerase factor sigma-54 | low | > 89 |
| Klebsiella michiganensis M5al | 0.42 | BWI76_RS11790 | | acyl-CoA thioesterase | 0.32 | BWI76_RS25265 | | RNA polymerase factor sigma-54 | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.42 | GFF2735 | | Acyl-CoA thioesterase YciA, involved in membrane biogenesis | 0.31 | GFF2946 | | RNA polymerase sigma-54 factor RpoN | low | > 78 |
| Serratia liquefaciens MT49 | 0.42 | IAI46_14085 | | acyl-CoA thioester hydrolase YciA | 0.30 | IAI46_22470 | | RNA polymerase factor sigma-54 | — | — |
| Pantoea sp. MT58 | 0.41 | IAI47_09135 | | acyl-CoA thioester hydrolase YciA | 0.31 | IAI47_17185 | | RNA polymerase factor sigma-54 | low | > 76 |
| Escherichia coli ECOR38 | 0.40 | HEPCGN_25145 | yciA | acyl-CoA thioester hydrolase YciA | 0.31 | HEPCGN_16815 | rpoN | RNA polymerase factor sigma-54 | — | — |
| Escherichia coli ECOR27 | 0.40 | NOLOHH_20370 | yciA | acyl-CoA thioester hydrolase YciA | 0.31 | NOLOHH_09740 | rpoN | RNA polymerase factor sigma-54 | — | — |
| Escherichia coli Nissle 1917 | 0.40 | ECOLIN_RS07565 | | acyl-CoA thioester hydrolase YciA | 0.31 | ECOLIN_RS18425 | | RNA polymerase factor sigma-54 | — | — |
| Escherichia coli BL21 | 0.40 | ECD_01227 | | acyl-CoA esterase | 0.31 | ECD_03067 | | RNA polymerase, sigma 54 (sigma N) factor | low | > 60 |
| Escherichia coli ECRC62 | 0.40 | BNILDI_18515 | yciA | acyl-CoA thioester hydrolase YciA | 0.31 | BNILDI_01795 | rpoN | RNA polymerase factor sigma-54 | — | — |
| Agrobacterium fabrum C58 | 0.40 | Atu3861 | | acyl-CoA hydrolase | 0.23 | Atu0332 | | RNA polymerase sigma-54 factor | low | > 89 |
| Escherichia coli BW25113 | 0.40 | b1253 | yciA | predicted hydrolase (NCBI) | 0.31 | b3202 | rpoN | DNA-directed RNA polymerase subunit N (NCBI) | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.40 | OHPLBJKB_02430 | | putative acyl-CoA thioester hydrolase | 0.31 | OHPLBJKB_00498 | | RNA polymerase sigma-54 factor | — | — |
| Escherichia fergusonii Becca | 0.40 | EFB2_02672 | | putative acyl-CoA thioester hydrolase | 0.31 | EFB2_00621 | | RNA polymerase sigma-54 factor | — | — |
| Acinetobacter radioresistens SK82 | 0.40 | MPMX26_02646 | | putative acyl-CoA thioester hydrolase | 0.28 | MPMX26_02592 | | RNA polymerase sigma-54 factor | low | > 36 |
| Escherichia coli ECRC101 | 0.40 | MCAODC_21580 | yciA | acyl-CoA thioester hydrolase YciA | 0.31 | MCAODC_08460 | rpoN | RNA polymerase factor sigma-54 | — | — |
| Escherichia coli ECRC98 | 0.40 | JDDGAC_05895 | yciA | acyl-CoA thioester hydrolase YciA | 0.31 | JDDGAC_21565 | rpoN | RNA polymerase factor sigma-54 | — | — |
| Escherichia coli ECRC99 | 0.40 | KEDOAH_25675 | yciA | acyl-CoA thioester hydrolase YciA | 0.31 | KEDOAH_10210 | rpoN | RNA polymerase factor sigma-54 | — | — |
| Escherichia coli ECRC102 | 0.40 | NIAGMN_27555 | yciA | acyl-CoA thioester hydrolase YciA | 0.31 | NIAGMN_15700 | rpoN | RNA polymerase factor sigma-54 | — | — |
| Escherichia coli ECRC101 | 0.40 | OKFHMN_28680 | yciA | acyl-CoA thioester hydrolase YciA | 0.31 | OKFHMN_17940 | rpoN | RNA polymerase factor sigma-54 | — | — |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.39 | A4249_RS12320 | | acyl-CoA thioesterase | 0.21 | A4249_RS16075 | | RNA polymerase factor sigma-54 | low | > 48 |
| Rhizobium sp. OAE497 | 0.39 | ABIE40_RS10785 | | acyl-CoA thioesterase | 0.23 | ABIE40_RS01860 | | RNA polymerase factor sigma-54 | low | > 107 |
| Magnetospirillum magneticum AMB-1 | 0.39 | AMB_RS16945 | | acyl-CoA thioesterase | 0.23 | AMB_RS19925 | | RNA polymerase sigma-54 factor | — | — |
| Sinorhizobium meliloti 1021 | 0.38 | SMc04228 | | hypothetical protein | 0.24 | SMc01139 | | RNA polymerase factor sigma-54 | low | > 103 |
| Marinobacter adhaerens HP15 | 0.36 | HP15_3390 | | thioesterase superfamily protein | 0.31 | HP15_2442 | | RNA polymerase, sigma 54 subunit, RpoN | low | > 73 |
| Pseudomonas syringae pv. syringae B728a | 0.36 | Psyr_5043 | | Thioesterase superfamily | 0.32 | Psyr_4147 | | RNA polymerase, sigma 54 subunit, RpoN/SigL | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.36 | Psyr_5043 | | Thioesterase superfamily | 0.32 | Psyr_4147 | | RNA polymerase, sigma 54 subunit, RpoN/SigL | — | — |
| Pseudomonas putida KT2440 | 0.36 | PP_5331 | | Long-chain acyl-CoA thioester hydrolase | 0.32 | PP_0952 | | RNA polymerase sigma-54 factor | — | — |
| Pseudomonas sp. RS175 | 0.36 | PFR28_04491 | | putative acyl-CoA thioester hydrolase | 0.31 | PFR28_00173 | | RNA polymerase sigma-54 factor | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.35 | AO353_09915 | | long-chain acyl-CoA thioester hydrolase | 0.32 | AO353_05180 | | RNA polymerase sigma-54 factor | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.35 | PFLU_RS29780 | | acyl-CoA thioesterase | 0.32 | PFLU_RS04400 | | RNA polymerase factor sigma-54 | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.35 | PfGW456L13_751 | | cytosolic long-chain acyl-CoA thioester hydrolase family protein | 0.32 | PfGW456L13_5014 | | RNA polymerase sigma-54 factor RpoN | — | — |
| Pseudomonas fluorescens SBW25 | 0.35 | PFLU_RS29780 | | acyl-CoA thioesterase | 0.32 | PFLU_RS04400 | | RNA polymerase factor sigma-54 | — | — |
| Pseudomonas simiae WCS417 | 0.35 | PS417_28095 | | long-chain acyl-CoA thioester hydrolase | 0.32 | PS417_04345 | | RNA polymerase factor sigma-54 | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.35 | Pf1N1B4_2032 | | cytosolic long-chain acyl-CoA thioester hydrolase family protein | 0.31 | Pf1N1B4_1080 | | RNA polymerase sigma-54 factor RpoN | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.35 | Pf6N2E2_4077 | | cytosolic long-chain acyl-CoA thioester hydrolase family protein | 0.31 | Pf6N2E2_3267 | | RNA polymerase sigma-54 factor RpoN | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.35 | AO356_11055 | | long-chain acyl-CoA thioester hydrolase | 0.32 | AO356_07035 | | RNA polymerase sigma-54 factor | — | — |
| Pseudomonas sp. S08-1 | 0.35 | OH686_13400 | | cytosolic long-chain acyl-CoA thioester hydrolase family protein | 0.32 | OH686_08540 | | RNA polymerase sigma-54 factor | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.34 | Ga0059261_3714 | | Acyl-CoA hydrolase | 0.23 | Ga0059261_2543 | | RNA polymerase, sigma 54 subunit, RpoN/SigL | low | > 68 |
| Pseudomonas stutzeri RCH2 | 0.34 | Psest_0218 | | Acyl-CoA hydrolase | 0.33 | Psest_3313 | | RNA polymerase sigma-54 factor | — | — |
Not shown: 2 genomes with orthologs for GFF516 only; 32 genomes with orthologs for GFF3068 only