Conservation of cofitness between PGA1_c15020 and PGA1_c29480 in Phaeobacter inhibens DSM 17395

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Phaeobacter inhibens DSM 17395 1.0 PGA1_c15020 D-beta-hydroxybutyrate dehydrogenase BdhA 1.0 PGA1_c29480 putative inner membrane transport protein 0.29 20
Bosea sp. OAE506 0.60 ABIE41_RS09040 3-hydroxybutyrate dehydrogenase 0.24 ABIE41_RS09390 benzoate/H(+) symporter BenE family transporter low > 77
Rhodopseudomonas palustris CGA009 0.56 TX73_021805 3-hydroxybutyrate dehydrogenase 0.36 TX73_014490 benzoate/H(+) symporter BenE family transporter low > 86
Azospirillum sp. SherDot2 0.56 MPMX19_05363 D-beta-hydroxybutyrate dehydrogenase 0.37 MPMX19_03070 Inner membrane protein YdcO low > 112
Castellaniella sp019104865 MT123 0.56 ABCV34_RS01165 3-hydroxybutyrate dehydrogenase 0.46 ABCV34_RS02900 benzoate/H(+) symporter BenE family transporter low > 48
Agrobacterium fabrum C58 0.55 Atu2308 d-beta-hydroxybutyrate dehydrogenase 0.29 Atu2265 benzoate transport protein low > 89
Azospirillum brasilense Sp245 0.55 AZOBR_RS16640 3-hydroxybutyrate dehydrogenase 0.37 AZOBR_RS19910 benzoate transporter — —
Rhodospirillum rubrum S1H 0.54 Rru_A1057 3-hydroxybutyrate dehydrogenase (NCBI) 0.34 Rru_A1144 Benzoate membrane transport protein (NCBI) low > 58
Sinorhizobium meliloti 1021 0.54 SM_b21010 D-beta-hydroxybutyrate dehydrogenase 0.28 SMc02691 membrane transporter low > 103
Variovorax sp. SCN45 0.53 GFF405 3-hydroxybutyrate dehydrogenase (EC 1.1.1.30) 0.44 GFF6323 Benzoate transport protein low > 127
Pseudomonas sp. S08-1 0.53 OH686_00815 3-hydroxybutyrate dehydrogenase 0.39 OH686_00595 Benzoate transport protein low > 80
Enterobacter asburiae PDN3 0.53 EX28DRAFT_1712 3-hydroxybutyrate dehydrogenase 0.34 EX28DRAFT_1224 benzoate transporter low > 76
Cupriavidus basilensis FW507-4G11 0.53 RR42_RS10725 3-hydroxybutyrate dehydrogenase 0.34 RR42_RS14695 membrane protein — —
Escherichia coli ECRC62 0.53 BNILDI_17500 3-hydroxybutyrate dehydrogenase 0.38 BNILDI_17735 ydcO BenE family transporter YdcO — —
Escherichia coli ECOR27 0.53 NOLOHH_19015 3-hydroxybutyrate dehydrogenase 0.38 NOLOHH_19285 ydcO BenE family transporter YdcO — —
Variovorax sp. OAS795 0.52 ABID97_RS17250 3-hydroxybutyrate dehydrogenase 0.43 ABID97_RS04625 benzoate/H(+) symporter BenE family transporter low > 91
Enterobacter sp. TBS_079 0.52 MPMX20_01908 D-beta-hydroxybutyrate dehydrogenase 0.35 MPMX20_02242 Inner membrane protein YdcO low > 85
Rhizobium sp. OAE497 0.52 ABIE40_RS13735 3-hydroxybutyrate dehydrogenase 0.29 ABIE40_RS13335 benzoate/H(+) symporter BenE family transporter low > 107
Pseudomonas stutzeri RCH2 0.52 Psest_3522 3-hydroxybutyrate dehydrogenase 0.37 Psest_1717 benzoate transporter low > 67
Dechlorosoma suillum PS 0.51 Dsui_2312 3-hydroxybutyrate dehydrogenase 0.35 Dsui_2253 benzoate transporter — —
Brevundimonas sp. GW460-12-10-14-LB2 0.51 A4249_RS06090 3-hydroxybutyrate dehydrogenase 0.32 A4249_RS14875 benzoate/H(+) symporter BenE family transporter low > 48
Pseudomonas fluorescens GW456-L13 0.51 PfGW456L13_2873 D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30) 0.39 PfGW456L13_4089 Benzoate transport protein low > 87
Acidovorax sp. GW101-3H11 0.50 Ac3H11_360 D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30) 0.40 Ac3H11_710 Benzoate transport protein low > 79
Hydrogenophaga sp. GW460-11-11-14-LB1 0.50 GFF4927 D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30) 0.45 GFF2649 Benzoate transport protein low > 90
Pseudomonas putida KT2440 0.49 PP_3073 3-hydroxybutyrate dehydrogenase 0.40 PP_1820 Benzoate transport protein low > 96
Pseudomonas fluorescens FW300-N2E2 0.48 Pf6N2E2_2041 D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30) 0.39 Pf6N2E2_5299 Benzoate transport protein low > 103
Pseudomonas fluorescens FW300-N2E3 0.48 AO353_21770 3-hydroxybutyrate dehydrogenase 0.39 AO353_29330 benzoate transporter low > 101
Pseudomonas simiae WCS417 0.48 PS417_12150 3-hydroxybutyrate dehydrogenase 0.38 PS417_20910 membrane protein — —
Pseudomonas fluorescens FW300-N2C3 0.48 AO356_00420 3-hydroxybutyrate dehydrogenase 0.38 AO356_02585 hypothetical protein low > 104
Pseudomonas sp. RS175 0.48 PFR28_01395 D-beta-hydroxybutyrate dehydrogenase 0.38 PFR28_01059 Inner membrane protein YdcO low > 88
Pseudomonas fluorescens SBW25 0.48 PFLU_RS12840 3-hydroxybutyrate dehydrogenase 0.38 PFLU_RS22525 benzoate/H(+) symporter BenE family transporter low > 109
Pseudomonas fluorescens FW300-N1B4 0.48 Pf1N1B4_5633 D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30) 0.39 Pf1N1B4_819 Benzoate transport protein — —
Pseudomonas fluorescens SBW25-INTG 0.48 PFLU_RS12840 3-hydroxybutyrate dehydrogenase 0.38 PFLU_RS22525 benzoate/H(+) symporter BenE family transporter low > 109
Shewanella sp. ANA-3 0.45 Shewana3_3466 short-chain dehydrogenase/reductase SDR (RefSeq) 0.45 Shewana3_0320 benzoate transporter (RefSeq) low > 73
Alteromonas macleodii MIT1002 0.43 MIT1002_01448 D-beta-hydroxybutyrate dehydrogenase 0.32 MIT1002_00747 Inner membrane protein YdcO low > 70
Xanthomonas campestris pv. campestris strain 8004 0.39 Xcc-8004.2418.1 D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30) 0.42 Xcc-8004.5286.1 Benzoate transport protein low > 74
Paraburkholderia sabiae LMG 24235 0.39 QEN71_RS37110 SDR family oxidoreductase 0.39 QEN71_RS24590 benzoate/H(+) symporter BenE family transporter low > 153
Paraburkholderia graminis OAS925 0.37 ABIE53_005629 3-hydroxybutyrate dehydrogenase 0.43 ABIE53_001417 benzoate membrane transport protein low > 113
Herbaspirillum seropedicae SmR1 0.35 HSERO_RS06265 3-hydroxybutyrate dehydrogenase 0.32 HSERO_RS06580 benzoate transporter low > 78
Lysobacter sp. OAE881 0.35 ABIE51_RS15715 3-hydroxybutyrate dehydrogenase 0.46 ABIE51_RS02455 benzoate/H(+) symporter BenE family transporter low > 62
Marinobacter adhaerens HP15 0.33 HP15_3798 3-hydroxybutyrate dehydrogenase 0.16 HP15_1094 benzoate membrane transport protein low > 73
Burkholderia phytofirmans PsJN 0.30 BPHYT_RS11930 3-hydroxybutyrate dehydrogenase 0.41 BPHYT_RS06050 membrane protein low > 109
Paraburkholderia bryophila 376MFSha3.1 0.30 H281DRAFT_04976 3-hydroxybutyrate dehydrogenase 0.41 H281DRAFT_00287 benzoate membrane transport protein low > 103
Pectobacterium carotovorum WPP14 0.27 HER17_RS19950 SDR family oxidoreductase 0.40 HER17_RS21705 benzoate/H(+) symporter BenE family transporter low > 75
Escherichia fergusonii Becca 0.26 EFB2_01718 putative oxidoreductase YohF 0.39 EFB2_02549 Inner membrane protein YdcO low > 86

Not shown: 16 genomes with orthologs for PGA1_c15020 only; 19 genomes with orthologs for PGA1_c29480 only