Conservation of cofitness between PS417_10540 and PS417_14480 in Pseudomonas simiae WCS417

52 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_10540 NAD-dependent deacetylase 1.0 PS417_14480 glycogen synthase 0.17 20
Pseudomonas fluorescens SBW25 0.88 PFLU_RS10600 NAD-dependent protein deacetylase 0.95 PFLU_RS16410 glycogen synthase GlgA low > 109
Pseudomonas fluorescens SBW25-INTG 0.88 PFLU_RS10600 NAD-dependent protein deacetylase 0.95 PFLU_RS16410 glycogen synthase GlgA low > 109
Pseudomonas fluorescens FW300-N2C3 0.73 AO356_21660 NAD-dependent deacetylase 0.84 AO356_26025 glycogen synthase low > 104
Pseudomonas fluorescens FW300-N2E2 0.73 Pf6N2E2_2109 NAD-dependent protein deacetylase of SIR2 family 0.84 Pf6N2E2_1078 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) 0.22 7
Pseudomonas fluorescens FW300-N2E3 0.70 AO353_26795 NAD-dependent deacetylase 0.83 AO353_23775 glycogen synthase low > 101
Pseudomonas syringae pv. syringae B728a ΔmexB 0.66 Psyr_2362 Silent information regulator protein Sir2 0.74 Psyr_2992 Starch (bacterial glycogen) synthase
Pseudomonas syringae pv. syringae B728a 0.66 Psyr_2362 Silent information regulator protein Sir2 0.74 Psyr_2992 Starch (bacterial glycogen) synthase low > 86
Herbaspirillum seropedicae SmR1 0.45 HSERO_RS18330 NAD-dependent deacetylase 0.26 HSERO_RS12515 glycogen synthase low > 78
Paraburkholderia bryophila 376MFSha3.1 0.45 H281DRAFT_03044 NAD-dependent protein deacetylase, SIR2 family 0.31 H281DRAFT_04861 starch synthase
Burkholderia phytofirmans PsJN 0.44 BPHYT_RS29640 NAD-dependent deacetylase 0.32 BPHYT_RS07615 glycogen synthase low > 109
Paraburkholderia graminis OAS925 0.44 ABIE53_005120 NAD-dependent SIR2 family protein deacetylase 0.29 ABIE53_005953 starch synthase low > 113
Xanthomonas campestris pv. campestris strain 8004 0.43 Xcc-8004.391.1 NAD-dependent protein deacetylase of SIR2 family 0.49 Xcc-8004.537.1 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) low > 74
Paraburkholderia sabiae LMG 24235 0.43 QEN71_RS20510 NAD-dependent protein deacetylase 0.32 QEN71_RS23430 glycogen synthase GlgA low > 153
Marinobacter adhaerens HP15 0.39 HP15_2625 silent information regulator protein Sir2 0.33 HP15_1713 glycogen/starch synthase, ADP-glucose type low > 73
Ralstonia solanacearum PSI07 0.20 RPSI07_RS18020 NAD-dependent deacylase 0.27 RPSI07_RS00900 glycogen synthase GlgA 0.51 50
Variovorax sp. SCN45 0.20 GFF5049 NAD-dependent protein deacetylase of SIR2 family 0.33 GFF7302 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) low > 127
Rhodopseudomonas palustris CGA009 0.19 TX73_013035 NAD-dependent protein deacetylase 0.31 TX73_001985 glycogen synthase GlgA low > 86
Ralstonia solanacearum GMI1000 0.19 RS_RS06165 NAD-dependent deacylase 0.26 RS_RS18320 glycogen synthase low > 80
Pseudomonas stutzeri RCH2 0.19 Psest_2405 NAD-dependent protein deacetylases, SIR2 family 0.60 Psest_2172 glycogen/starch synthases, ADP-glucose type 0.19 44
Ralstonia sp. UNC404CL21Col 0.19 ABZR87_RS10995 NAD-dependent deacylase 0.29 ABZR87_RS17230 glycogen synthase GlgA low > 80
Bosea sp. OAE506 0.19 ABIE41_RS14930 Sir2 family NAD-dependent protein deacetylase 0.45 ABIE41_RS13060 glycogen synthase GlgA low > 77
Ralstonia solanacearum UW163 0.18 UW163_RS12820 NAD-dependent deacylase 0.26 UW163_RS22835 glycogen synthase GlgA
Ralstonia solanacearum IBSBF1503 0.18 RALBFv3_RS15355 NAD-dependent deacylase 0.26 RALBFv3_RS22290 glycogen synthase GlgA low > 76
Pseudomonas sp. S08-1 0.17 OH686_06015 NAD-dependent protein deacetylase of SIR2 family 0.65 OH686_01280 Glycogen synthase, ADP-glucose transglucosylase low > 80
Pseudomonas putida KT2440 0.17 PP_5402 deacetylase of acetyl-CoA synthetase, NAD-dependent 0.78 PP_4050 glycogen synthase low > 96
Fusobacterium nucleatum SB010 0.16 HUW76_06465 NAD-dependent protein deacylase 0.22 HUW76_05855 glycogen synthase low > 35
Alteromonas macleodii MIT1002 0.15 MIT1002_02145 NAD-dependent protein deacylase 0.22 MIT1002_00235 Glycogen synthase low > 70
Azospirillum sp. SherDot2 0.14 MPMX19_02648 NAD-dependent protein deacylase 0.34 MPMX19_02225 Glycogen synthase
Azospirillum brasilense Sp245 0.14 AZOBR_RS00620 NAD-dependent deacetylase 0.35 AZOBR_RS00855 glycogen synthase
Shewanella oneidensis MR-1 0.13 SO1938 cobB cobB protein (NCBI ptt file) 0.10 SO1499 glgA glycogen synthase (NCBI ptt file) low > 76
Rhodospirillum rubrum S1H 0.13 Rru_A3645 Silent information regulator protein Sir2 (NCBI) 0.32 Rru_A2245 Glycogen/starch synthases, ADP-glucose type (NCBI)
Pectobacterium carotovorum WPP14 0.13 HER17_RS08800 NAD-dependent protein deacylase 0.35 HER17_RS01500 glycogen synthase GlgA low > 75
Shewanella loihica PV-4 0.13 Shew_1662 NAD-dependent deacetylase (RefSeq) 0.10 Shew_1172 starch synthase (RefSeq) low > 60
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.13 GFF3403 NAD-dependent protein deacetylase of SIR2 family 0.34 GFF578 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) low > 78
Shewanella sp. ANA-3 0.13 Shewana3_1717 NAD-dependent deacetylase (RefSeq) 0.11 Shewana3_2930 starch synthase catalytic subunit (RefSeq)
Magnetospirillum magneticum AMB-1 0.13 AMB_RS04415 NAD-dependent protein deacylase 0.34 AMB_RS10650 glycogen synthase
Enterobacter asburiae PDN3 0.13 EX28DRAFT_1810 NAD-dependent protein deacetylases, SIR2 family 0.34 EX28DRAFT_4118 glycogen/starch synthase, ADP-glucose type 0.41 58
Escherichia fergusonii Becca 0.13 EFB2_02855 NAD-dependent protein deacylase 0.34 EFB2_00390 Glycogen synthase low > 86
Escherichia coli Nissle 1917 0.13 ECOLIN_RS06455 Sir2 family NAD+-dependent deacetylase 0.34 ECOLIN_RS19625 glycogen synthase GlgA
Escherichia coli ECRC98 0.13 JDDGAC_07100 cobB NAD-dependent protein deacylase 0.34 JDDGAC_20530 glgA glycogen synthase GlgA
Escherichia coli ECRC102 0.13 NIAGMN_24390 cobB NAD-dependent protein deacylase 0.34 NIAGMN_14670 glgA glycogen synthase GlgA
Escherichia coli HS(pFamp)R (ATCC 700891) 0.13 OHPLBJKB_02546 NAD-dependent protein deacylase 0.34 OHPLBJKB_00272 Glycogen synthase low > 73
Escherichia coli ECOR38 0.13 HEPCGN_24045 cobB NAD-dependent protein deacylase 0.34 HEPCGN_15715 glgA glycogen synthase GlgA low > 85
Escherichia coli BL21 0.13 ECD_01118 deacetylase of acs and cheY, chemotaxis regulator 0.34 ECD_03281 glycogen synthase low > 60
Escherichia coli ECRC99 0.13 KEDOAH_24315 cobB NAD-dependent protein deacylase 0.34 KEDOAH_11240 glgA glycogen synthase GlgA
Escherichia coli ECOR27 0.13 NOLOHH_20965 cobB NAD-dependent protein deacylase 0.34 NOLOHH_08690 glgA glycogen synthase GlgA
Escherichia coli ECRC62 0.13 BNILDI_19130 cobB NAD-dependent protein deacylase 0.34 BNILDI_02825 glgA glycogen synthase GlgA
Escherichia coli ECRC101 0.13 MCAODC_22800 cobB NAD-dependent protein deacylase 0.34 MCAODC_07430 glgA glycogen synthase GlgA
Escherichia coli ECRC101 0.13 OKFHMN_03440 cobB NAD-dependent protein deacylase 0.34 OKFHMN_16900 glgA glycogen synthase GlgA
Escherichia coli BW25113 0.12 b1120 cobB deacetylase of acs and cheY, regulates chemotaxis (NCBI) 0.34 b3429 glgA glycogen synthase (NCBI) low > 76
Enterobacter sp. TBS_079 0.12 MPMX20_01801 NAD-dependent protein deacylase 0.34 MPMX20_04311 Glycogen synthase low > 85
Shewanella amazonensis SB2B 0.12 Sama_1435 NAD-dependent deacetylase (RefSeq) 0.11 Sama_2449 starch synthase (RefSeq) low > 62

Not shown: 21 genomes with orthologs for PS417_10540 only; 19 genomes with orthologs for PS417_14480 only