Conservation of cofitness between Psest_4287 and Psest_2845 in Pseudomonas stutzeri RCH2

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_4287 Predicted glutamine amidotransferases 1.0 Psest_2845 [Protein-PII] uridylyltransferase 0.40 10
Pseudomonas fluorescens FW300-N1B4 0.71 Pf1N1B4_2255 Gamma-glutamyl-GABA hydrolase (EC 3.5.1.94) 0.81 Pf1N1B4_3081 [Protein-PII] uridylyltransferase (EC 2.7.7.59) low > 87
Pseudomonas sp. S08-1 0.70 OH686_11480 Gamma-glutamyl-GABA hydrolase 0.83 OH686_06495 protein-P-II uridylyltransferase low > 80
Pseudomonas fluorescens FW300-N2C3 0.69 AO356_13140 Gamma-glutamyl-GABA hydrolase (EC 3.5.1.94) (from data) 0.81 AO356_06050 protein-PII uridylyltransferase low > 104
Pseudomonas fluorescens FW300-N2E2 0.66 Pf6N2E2_4510 Gamma-glutamyl-GABA hydrolase (EC 3.5.1.94) (from data) 0.81 Pf6N2E2_3072 [Protein-PII] uridylyltransferase (EC 2.7.7.59) low > 103
Pseudomonas putida KT2440 0.66 PP_2179 glutamine amidotransferase 0.80 PP_1589 uridylyltransferase low > 96
Shewanella amazonensis SB2B 0.61 Sama_2645 Gamma-glutamyl-GABA hydrolase (EC 3.5.1.94) (from data) 0.38 Sama_1137 PII uridylyl-transferase (RefSeq) low > 62
Pseudomonas fluorescens FW300-N2E3 0.61 AO353_29305 Gamma-glutamyl-GABA hydrolase (EC 3.5.1.94) (from data) 0.81 AO353_16450 protein-PII uridylyltransferase low > 101
Shewanella sp. ANA-3 0.59 Shewana3_3099 peptidase C26 (RefSeq) 0.37 Shewana3_2817 PII uridylyl-transferase (RefSeq) low > 73
Shewanella loihica PV-4 0.59 Shew_0971 peptidase C26 (RefSeq) 0.37 Shew_2637 PII uridylyl-transferase (RefSeq) low > 60
Shewanella oneidensis MR-1 0.59 SO1267 Gamma-glutamyl-gamma-aminobutyrate hydrolase (EC 3.5.1.94) (from data) 0.37 SO1626 glnD protein-P-II uridylyltransferase (NCBI ptt file) 0.22 43
Pseudomonas syringae pv. syringae B728a 0.59 Psyr_2706 gamma-glutamyl-gamma-aminobutyrate hydrolase 0.80 Psyr_1341 Protein-P-II uridylyltransferase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.59 Psyr_2706 gamma-glutamyl-gamma-aminobutyrate hydrolase 0.80 Psyr_1341 Protein-P-II uridylyltransferase 0.33 60
Azospirillum brasilense Sp245 0.57 AZOBR_RS02010 glutamine amidotransferase 0.24 AZOBR_RS02110 protein-PII uridylyltransferase low > 97
Paraburkholderia sabiae LMG 24235 0.54 QEN71_RS12930 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein 0.31 QEN71_RS06410 [protein-PII] uridylyltransferase 0.49 91
Burkholderia phytofirmans PsJN 0.54 BPHYT_RS23165 glutamine amidotransferase 0.32 BPHYT_RS12150 PII uridylyl-transferase — —
Paraburkholderia bryophila 376MFSha3.1 0.49 H281DRAFT_01080 gamma-glutamyl-gamma-aminobutyrate hydrolase 0.32 H281DRAFT_00608 UTP--GlnB (protein PII) uridylyltransferase, GlnD — —
Xanthomonas campestris pv. campestris strain 8004 0.48 Xcc-8004.2203.1 hypothetical protein 0.32 Xcc-8004.3543.1 [Protein-PII] uridylyltransferase (EC 2.7.7.59) — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.41 GFF2038 Gamma-glutamyl-GABA hydrolase (EC 3.5.1.94) 0.30 GFF4563 [Protein-PII] uridylyltransferase (EC 2.7.7.59) low > 90
Rahnella sp. WP5 0.40 EX31_RS17900 gamma-glutamyl-gamma-aminobutyrate hydrolase 0.37 EX31_RS13045 bifunctional uridylyltransferase/uridylyl-removing protein GlnD low > 89
Enterobacter asburiae PDN3 0.38 EX28DRAFT_1499 Predicted glutamine amidotransferases 0.36 EX28DRAFT_3754 UTP--GlnB (protein PII) uridylyltransferase, GlnD low > 76
Klebsiella michiganensis M5al 0.38 BWI76_RS10705 Gamma-glutamyl-gamma-aminobutyrate hydrolase (EC 3.5.1.94) (from data) 0.36 BWI76_RS05200 bifunctional uridylyltransferase/uridylyl-removing protein low > 92
Escherichia coli ECRC101 0.38 OKFHMN_02440 puuD gamma-glutamyl-gamma-aminobutyrate hydrolase 0.36 OKFHMN_10235 glnD bifunctional uridylyltransferase/uridylyl-removing protein GlnD — —
Escherichia coli ECRC102 0.38 NIAGMN_26610 puuD gamma-glutamyl-gamma-aminobutyrate hydrolase 0.36 NIAGMN_08085 glnD bifunctional uridylyltransferase/uridylyl-removing protein GlnD — —
Escherichia coli ECRC101 0.38 MCAODC_15830 puuD gamma-glutamyl-gamma-aminobutyrate hydrolase 0.36 MCAODC_00750 glnD bifunctional uridylyltransferase/uridylyl-removing protein GlnD — —
Escherichia coli ECOR38 0.38 HEPCGN_25760 puuD gamma-glutamyl-gamma-aminobutyrate hydrolase 0.36 HEPCGN_08185 glnD bifunctional uridylyltransferase/uridylyl-removing protein GlnD — —
Escherichia coli ECOR27 0.38 NOLOHH_20125 puuD gamma-glutamyl-gamma-aminobutyrate hydrolase 0.36 NOLOHH_02580 glnD bifunctional uridylyltransferase/uridylyl-removing protein GlnD — —
Escherichia coli ECRC99 0.38 KEDOAH_26335 puuD gamma-glutamyl-gamma-aminobutyrate hydrolase 0.36 KEDOAH_17920 glnD bifunctional uridylyltransferase/uridylyl-removing protein GlnD — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.38 OHPLBJKB_02384 Gamma-glutamyl-gamma-aminobutyrate hydrolase PuuD 0.36 OHPLBJKB_03497 Bifunctional uridylyltransferase/uridylyl-removing enzyme low > 73
Escherichia coli BW25113 0.38 b1298 ycjL probable amidotransferase subunit (VIMSS) 0.36 b0167 glnD PII uridylyl-transferase (NCBI) 0.17 30
Escherichia coli ECRC62 0.38 BNILDI_18275 puuD gamma-glutamyl-gamma-aminobutyrate hydrolase 0.36 BNILDI_09090 glnD bifunctional uridylyltransferase/uridylyl-removing protein GlnD — —
Escherichia coli ECRC98 0.38 JDDGAC_04985 puuD gamma-glutamyl-gamma-aminobutyrate hydrolase 0.36 JDDGAC_13830 glnD bifunctional uridylyltransferase/uridylyl-removing protein GlnD — —
Serratia liquefaciens MT49 0.38 IAI46_10555 gamma-glutamyl-gamma-aminobutyrate hydrolase 0.37 IAI46_20270 bifunctional uridylyltransferase/uridylyl-removing protein GlnD low > 86
Escherichia coli BL21 0.37 ECD_01275 gamma-glutamyl-gamma-aminobutyrate hydrolase 0.36 ECD_00165 uridylyltransferase low > 60
Pantoea sp. MT58 0.37 IAI47_07120 gamma-glutamyl-gamma-aminobutyrate hydrolase 0.36 IAI47_15540 bifunctional uridylyltransferase/uridylyl-removing protein GlnD low > 76
Agrobacterium fabrum C58 0.37 Atu3369 hypothetical protein 0.24 Atu0346 uridylyltransferase/uridylyl-removing enzyme UTase low > 89
Sinorhizobium meliloti 1021 0.35 SMc03943 hypothetical protein 0.24 SMc01124 PII uridylyl-transferase low > 103
Rhizobium sp. OAE497 0.35 ABIE40_RS16635 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein 0.23 ABIE40_RS01765 [protein-PII] uridylyltransferase low > 107
Caulobacter crescentus NA1000 Δfur 0.35 CCNA_03234 glutamine amidotransferase, class I 0.22 CCNA_00013 protein-PII uridylyltransferase — —
Caulobacter crescentus NA1000 0.35 CCNA_03234 glutamine amidotransferase, class I 0.22 CCNA_00013 protein-PII uridylyltransferase low > 66
Phaeobacter inhibens DSM 17395 0.35 PGA1_c09920 putative gamma-glutamyl-gamma-aminobutyrate hydrolase 0.21 PGA1_c26750 uridylyltransferase GlnD — —
Dinoroseobacter shibae DFL-12 0.33 Dshi_1229 peptidase C26 (RefSeq) 0.22 Dshi_2833 UTP-GlnB uridylyltransferase, GlnD (RefSeq) — —
Rhodopseudomonas palustris CGA009 0.31 TX73_007520 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein 0.23 TX73_003060 [protein-PII] uridylyltransferase low > 86
Magnetospirillum magneticum AMB-1 0.21 AMB_RS20870 gamma-glutamyl-gamma-aminobutyrate hydrolase 0.25 AMB_RS22650 [protein-PII] uridylyltransferase — —
Rhodospirillum rubrum S1H 0.19 Rru_A0651 Glutamine amidotransferase class-I (NCBI) 0.24 Rru_A3539 GlnB (protein PII) uridylyltransferase, GlnD (NCBI) low > 58
Marinobacter adhaerens HP15 0.17 HP15_2338 peptidase C26 0.51 HP15_1163 [protein-PII] uridylyltransferase low > 73

Not shown: 3 genomes with orthologs for Psest_4287 only; 42 genomes with orthologs for Psest_2845 only