Conservation of cofitness between GFF3485 and GFF2632 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

56 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF3485 Selenide,water dikinase (EC 2.7.9.3) 1.0 GFF2632 ATP-dependent RNA helicase HrpA (EC 3.6.4.13) 0.55 20
Escherichia fergusonii Becca 0.95 EFB2_02230 Selenide, water dikinase 0.95 EFB2_02565 hypothetical protein low > 86
Escherichia coli ECRC102 0.94 NIAGMN_01240 selD selenide, water dikinase SelD 0.96 NIAGMN_25865 hrpA ATP-dependent RNA helicase HrpA low > 80
Escherichia coli Nissle 1917 0.94 ECOLIN_RS09835 selenide, water dikinase SelD 0.96 ECOLIN_RS08180 ATP-dependent RNA helicase HrpA
Escherichia coli ECRC100 0.94 OKFHMN_26825 selD selenide, water dikinase SelD 0.96 OKFHMN_01730 hrpA ATP-dependent RNA helicase HrpA low > 79
Escherichia coli BW25113 0.94 b1764 selD selenophosphate synthetase (NCBI) 0.96 b1413 hrpA ATP-dependent helicase (RefSeq) low > 76
Escherichia coli ECRC99 0.94 KEDOAH_01285 selD selenide, water dikinase SelD 0.96 KEDOAH_26710 hrpA ATP-dependent RNA helicase HrpA
Escherichia coli HS(pFamp)R (ATCC 700891) 0.94 OHPLBJKB_01968 Selenide, water dikinase 0.96 OHPLBJKB_02301 hypothetical protein low > 74
Escherichia coli ECRC101 0.94 MCAODC_18585 selD selenide, water dikinase SelD 0.96 MCAODC_16205 hrpA ATP-dependent RNA helicase HrpA low > 87
Escherichia coli ECRC98 0.94 JDDGAC_01400 selD selenide, water dikinase SelD 0.96 JDDGAC_04220 hrpA ATP-dependent RNA helicase HrpA low > 87
Escherichia coli ECOR38 0.94 HEPCGN_05195 selD selenide, water dikinase SelD 0.96 HEPCGN_26110 hrpA ATP-dependent RNA helicase HrpA low > 88
Escherichia coli BL21 0.94 ECD_01733 selenophosphate synthase 0.96 ECD_01368 putative ATP-dependent helicase low > 61
Escherichia coli ECOR27 0.93 NOLOHH_17335 selD selenide, water dikinase SelD 0.96 NOLOHH_19390 hrpA ATP-dependent RNA helicase HrpA low > 76
Escherichia coli ECRC62 0.93 BNILDI_16120 selD selenide, water dikinase SelD 0.96 BNILDI_17845 hrpA ATP-dependent RNA helicase HrpA low > 75
Enterobacter sp. TBS_079 0.93 MPMX20_01852 Selenide, water dikinase 0.94 MPMX20_02189 hypothetical protein low > 85
Enterobacter asburiae PDN3 0.92 EX28DRAFT_1765 selenophosphate synthase (EC 2.7.9.3) 0.94 EX28DRAFT_1357 RNA helicase HrpA low > 76
Klebsiella pneumoniae MKP103 0.88 KDGMDA_19280 selenide water dikinase SelD 0.94 KDGMDA_20775 ATP-dependent RNA helicase HrpA low > 95
Klebsiella michiganensis M5al 0.86 BWI76_RS11600 selenide, water dikinase SelD 0.93 BWI76_RS13165 ATP-dependent RNA helicase HrpA low > 92
Serratia liquefaciens MT49 0.78 IAI46_14315 selenide, water dikinase SelD 0.83 IAI46_13330 ATP-dependent RNA helicase HrpA low > 87
Pseudomonas putida KT2440 0.64 PP_0823 Selenide, water dikinase 0.44 PP_4546 ATP-dependent helicase HrpA 0.24 71
Pseudomonas sp. BP01 0.64 JOY50_RS22915 selD selenide, water dikinase SelD 0.44 JOY50_RS01295 hrpA ATP-dependent RNA helicase HrpA low > 84
Pseudomonas sp. SVBP6 0.64 COO64_RS03760 selD selenide, water dikinase SelD 0.45 COO64_RS22000 hrpA ATP-dependent RNA helicase HrpA low > 93
Pseudomonas stutzeri RCH2 0.63 Psest_2462 selenium donor protein 0.43 Psest_1339 ATP-dependent helicase HrpA low > 67
Pseudomonas syringae pv. syringae B728a 0.63 Psyr_0696 selenophosphate synthase 0.46 Psyr_3831 ATP-dependent helicase HrpA low > 86
Pseudomonas fluorescens FW300-N2E3 0.63 AO353_00050 selenide, water dikinase 0.45 AO353_18225 ATP-dependent RNA helicase HrpA low > 101
Pseudomonas syringae pv. syringae B728a ΔmexB 0.63 Psyr_0696 selenophosphate synthase 0.46 Psyr_3831 ATP-dependent helicase HrpA low > 86
Pseudomonas lactucae CFBP13502 0.63 GEMAOFIL_02182 Selenide, water dikinase 0.45 GEMAOFIL_04265 hypothetical protein low > 96
Pseudomonas sp. S08-1 0.63 OH686_21210 selenide, water dikinase 0.43 OH686_05730 RNA helicase HrpA low > 80
Herbaspirillum seropedicae SmR1 0.63 HSERO_RS15820 selenide, water dikinase 0.42 HSERO_RS17315 ATP-dependent helicase low > 78
Pseudomonas fluorescens FW300-N2E2 0.63 Pf6N2E2_2151 Selenide,water dikinase (EC 2.7.9.3) 0.45 Pf6N2E2_2694 ATP-dependent RNA helicase HrpA (EC 3.6.4.13) low > 103
Pseudomonas orientalis W4I3 0.62 QF045_RS12440 selenide, water dikinase SelD 0.45 QF045_RS22485 ATP-dependent RNA helicase HrpA low > 93
Pseudomonas fluorescens FW300-N2C3 0.62 AO356_01395 selenide, water dikinase 0.45 AO356_04280 ATP-dependent RNA helicase HrpA low > 104
Pseudomonas simiae WCS417 0.62 PS417_10460 selenide, water dikinase 0.45 PS417_20575 ATP-dependent helicase HrpA low > 88
Pseudomonas sp. RS175 0.62 PFR28_01285 Selenide, water dikinase 0.45 PFR28_00739 hypothetical protein low > 88
Acidovorax sp. GW101-3H11 0.62 Ac3H11_1765 Selenide,water dikinase (EC 2.7.9.3) 0.39 Ac3H11_896 macromolecule metabolism; macromolecule synthesis, modification; dna - replication, repair, restr./modif. low > 79
Pseudomonas aeruginosa MRSN321 0.62 DY961_RS19860 selD;go_function=selenide%2C selenide water dikinase SelD 0.45 DY961_RS00395 hrpA;go_function=helicase ATP-dependent RNA helicase HrpA low > 100
Pseudomonas aeruginosa PA14 0.62 IKLFDK_07875 selenide water dikinase SelD 0.45 IKLFDK_16885 ATP-dependent RNA helicase HrpA low > 98
Pseudomonas aeruginosa PUPa3 0.62 DQ20_RS53965 selD;go_function=selenide%2C selenide water dikinase SelD 0.45 DQ20_RS40625 hrpA;go_function=helicase ATP-dependent RNA helicase HrpA low > 101
Pseudomonas fluorescens FW300-N1B4 0.62 Pf1N1B4_97 Selenide,water dikinase (EC 2.7.9.3) 0.45 Pf1N1B4_3388 ATP-dependent RNA helicase HrpA (EC 3.6.4.13) low > 87
Pseudomonas fluorescens GW456-L13 0.62 PfGW456L13_2462 Selenide,water dikinase (EC 2.7.9.3) 0.45 PfGW456L13_4467 ATP-dependent RNA helicase HrpA (EC 3.6.4.13) low > 87
Pseudomonas segetis P6 0.61 MPMX49_02674 Selenide, water dikinase 0.43 MPMX49_03273 hypothetical protein 0.36 39
Pseudomonas sp. DMC3 0.61 GFF1384 Selenide, water dikinase 0.45 GFF2341 hypothetical protein low > 89
Shewanella loihica PV-4 0.60 Shew_0135 selenide, water dikinase (RefSeq) 0.58 Shew_1767 ATP-dependent helicase HrpA (RefSeq) low > 60
Shewanella amazonensis SB2B 0.60 Sama_0190 selenide, water dikinase (RefSeq) 0.58 Sama_1619 ATP-dependent helicase HrpA (RefSeq) low > 62
Cupriavidus basilensis FW507-4G11 0.59 RR42_RS01805 selenophosphate synthase 0.42 RR42_RS13030 ATP-dependent helicase low > 128
Shewanella oneidensis MR-1 0.59 SO0196 selD selenide, water dikinase (NCBI ptt file) 0.57 SO2229 hrpA ATP-dependent helicase HrpA (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.58 Shewana3_0176 selenophosphate synthase (RefSeq) 0.57 Shewana3_1897 ATP-dependent helicase HrpA (RefSeq) low > 73
Paraburkholderia sabiae LMG 24235 0.48 QEN71_RS20070 selenide, water dikinase SelD 0.37 QEN71_RS05625 ATP-dependent RNA helicase HrpA low > 153
Paraburkholderia graminis OAS925 0.46 ABIE53_004985 selenide,water dikinase 0.41 ABIE53_002813 ATP-dependent helicase HrpA low > 113
Paraburkholderia bryophila 376MFSha3.1 0.46 H281DRAFT_06382 selenophosphate synthase 0.37 H281DRAFT_00445 ATP-dependent helicase HrpA low > 103
Burkholderia phytofirmans PsJN 0.46 BPHYT_RS32455 segregation protein A 0.41 BPHYT_RS12980 ATP-dependent helicase low > 109
Dechlorosoma suillum PS 0.44 Dsui_2309 selenium donor protein 0.39 Dsui_1373 ATP-dependent helicase HrpA low > 51
Hydrogenophaga sp. GW460-11-11-14-LB1 0.43 GFF807 Selenide,water dikinase (EC 2.7.9.3) 0.38 GFF4301 macromolecule metabolism; macromolecule synthesis, modification; dna - replication, repair, restr./modif. low > 90
Variovorax sp. SCN45 0.43 GFF5649 Selenide,water dikinase (EC 2.7.9.3) 0.40 GFF247 ATP-dependent helicase HrpA low > 127
Variovorax sp. OAS795 0.43 ABID97_RS08115 selenide, water dikinase SelD 0.41 ABID97_RS16615 ATP-dependent RNA helicase HrpA low > 91
Castellaniella sp019104865 MT123 0.43 ABCV34_RS06660 selenide, water dikinase SelD 0.40 ABCV34_RS02420 ATP-dependent RNA helicase HrpA low > 48
Dyella japonica UNC79MFTsu3.2 0.41 ABZR86_RS04545 selenide, water dikinase SelD 0.37 ABZR86_RS19720 ATP-dependent RNA helicase HrpA low > 74

Not shown: 7 genomes with orthologs for GFF3485 only; 28 genomes with orthologs for GFF2632 only