Conservation of cofitness between GFF1390 and GFF2615 in Hydrogenophaga sp. GW460-11-11-14-LB1

52 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF1390 General secretion pathway protein D 1.0 GFF2615 Ferric uptake regulation protein FUR 0.55 2
Acidovorax sp. GW101-3H11 0.52 Ac3H11_2030 General secretion pathway protein D / Type II secretion outermembrane pore forming protein (PulD) 0.68 Ac3H11_684 Ferric uptake regulation protein FUR — —
Variovorax sp. SCN45 0.50 GFF5235 General secretion pathway protein D / Type II secretion outermembrane pore forming protein (PulD) 0.66 GFF7296 Ferric uptake regulation protein FUR — —
Variovorax sp. OAS795 0.50 ABID97_RS06950 type II secretion system secretin GspD 0.66 ABID97_RS04505 ferric iron uptake transcriptional regulator low > 91
Ralstonia solanacearum UW163 0.42 UW163_RS05885 type II secretion system protein GspD 0.68 UW163_RS07770 ferric iron uptake transcriptional regulator — —
Ralstonia solanacearum IBSBF1503 0.42 RALBFv3_RS07740 type II secretion system protein GspD 0.68 RALBFv3_RS05855 ferric iron uptake transcriptional regulator low > 76
Ralstonia solanacearum PSI07 0.42 RPSI07_RS09520 type II secretion system protein GspD 0.68 RPSI07_RS11445 ferric iron uptake transcriptional regulator low > 81
Ralstonia sp. UNC404CL21Col 0.42 ABZR87_RS03450 type II secretion system secretin GspD 0.69 ABZR87_RS01425 ferric iron uptake transcriptional regulator low > 80
Ralstonia solanacearum GMI1000 0.42 RS_RS15640 type II secretion system protein GspD 0.68 RS_RS13745 ferric iron uptake transcriptional regulator — —
Cupriavidus basilensis FW507-4G11 0.41 RR42_RS19520 general secretion pathway protein GspD 0.67 RR42_RS17560 Fur family transcriptional regulator low > 128
Pseudomonas fluorescens FW300-N2E2 0.38 Pf6N2E2_651 General secretion pathway protein D 0.45 Pf6N2E2_3371 Ferric uptake regulation protein FUR — —
Pseudomonas sp. RS175 0.37 PFR28_01750 Secretin XcpQ 0.43 PFR28_00070 Ferric uptake regulation protein — —
Pseudomonas fluorescens FW300-N2C3 0.37 AO356_24790 type II secretion system protein GspD 0.45 AO356_07515 Fur family transcriptional regulator — —
Pseudomonas simiae WCS417 0.37 PS417_11295 general secretion pathway protein GspD 0.44 PS417_24075 Fur family transcriptional regulator — —
Pseudomonas fluorescens SBW25-INTG 0.37 PFLU_RS11890 type II secretion system secretin GspD 0.44 PFLU_RS25915 ferric iron uptake transcriptional regulator — —
Pseudomonas fluorescens SBW25 0.37 PFLU_RS11890 type II secretion system secretin GspD 0.44 PFLU_RS25915 ferric iron uptake transcriptional regulator — —
Burkholderia phytofirmans PsJN 0.35 BPHYT_RS19595 general secretion pathway protein GspD 0.67 BPHYT_RS16810 Fur family transcriptional regulator — —
Paraburkholderia graminis OAS925 0.34 ABIE53_000295 general secretion pathway protein D 0.67 ABIE53_003531 Fur family ferric uptake transcriptional regulator low > 113
Marinobacter adhaerens HP15 0.23 HP15_2355 type II and III secretion system protein 0.43 HP15_3085 ferric-uptake regulator — —
Acinetobacter radioresistens SK82 0.23 MPMX26_00196 Secretin XcpQ 0.47 MPMX26_02407 Ferric uptake regulation protein — —
Pseudomonas sp. S08-1 0.23 OH686_11840 type II secretion system protein D 0.45 OH686_17045 Ferric uptake regulation protein FUR — —
Kangiella aquimarina DSM 16071 0.21 B158DRAFT_0689 general secretion pathway protein D 0.42 B158DRAFT_0599 Fe2+/Zn2+ uptake regulation proteins low > 40
Pseudomonas stutzeri RCH2 0.20 Psest_2577 general secretion pathway protein D 0.45 Psest_0961 Fe2+/Zn2+ uptake regulation proteins — —
Pseudomonas fluorescens FW300-N2E3 0.20 AO353_12545 type II secretion system protein GspD 0.40 AO353_05665 Fur family transcriptional regulator — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.20 OHPLBJKB_00739 Type II secretion system protein D 0.48 OHPLBJKB_03032 Ferric uptake regulation protein low > 73
Pseudomonas fluorescens GW456-L13 0.20 PfGW456L13_266 General secretion pathway protein D 0.45 PfGW456L13_5107 Ferric uptake regulation protein FUR — —
Escherichia coli Nissle 1917 0.19 ECOLIN_RS17085 type II secretion system secretin GspD 0.48 ECOLIN_RS03695 ferric iron uptake transcriptional regulator low > 55
Shewanella amazonensis SB2B 0.19 Sama_0169 type II and III secretion system protein (RefSeq) 0.45 Sama_1434 fur ferric uptake regulator (RefSeq) — —
Escherichia coli ECOR38 0.19 HEPCGN_18050 gspD general secretion pathway protein D 0.48 HEPCGN_01095 fur ferric iron uptake transcriptional regulator — —
Escherichia coli ECOR27 0.19 NOLOHH_10975 gspD general secretion pathway protein D 0.48 NOLOHH_23510 fur ferric iron uptake transcriptional regulator low > 75
Escherichia coli BL21 0.19 ECD_02838 putative type II secretion protein GspD 0.48 ECD_00640 ferric iron uptake regulon transcriptional repressor; autorepressor — —
Escherichia fergusonii Becca 0.19 EFB2_00845 Secretin GspD 2 0.48 EFB2_03411 Ferric uptake regulation protein — —
Alteromonas macleodii MIT1002 0.19 MIT1002_03976 Pullulanase secretion envelope PulD 0.48 MIT1002_02294 Ferric uptake regulation protein — —
Enterobacter asburiae PDN3 0.18 EX28DRAFT_2079 type II secretion system protein D 0.49 EX28DRAFT_2292 Fe2+/Zn2+ uptake regulation proteins — —
Shewanella loihica PV-4 0.18 Shew_3619 general secretion pathway protein D (RefSeq) 0.44 Shew_1661 fur ferric uptake regulator (RefSeq) — —
Escherichia coli BW25113 0.18 b3325 yheF putative general protein secretion protein (VIMSS) 0.48 b0683 fur ferric uptake regulator (NCBI) low > 76
Escherichia coli ECRC98 0.18 JDDGAC_30295 etpD variant type II secretion system secretin EtpD 0.48 JDDGAC_10780 fur ferric iron uptake transcriptional regulator — —
Escherichia coli ECRC100 0.18 OKFHMN_00285 etpD variant type II secretion system secretin EtpD 0.48 OKFHMN_07130 fur ferric iron uptake transcriptional regulator — —
Shewanella oneidensis MR-1 0.18 SO0166 gspD general secretion pathway protein D (NCBI ptt file) 0.45 SO1937 fur ferric uptake regulation protein (NCBI ptt file) — —
Escherichia coli ECRC101 0.18 MCAODC_15265 etpD variant type II secretion system secretin EtpD 0.48 MCAODC_26345 fur ferric iron uptake transcriptional regulator — —
Escherichia coli ECRC102 0.18 NIAGMN_28605 etpD variant type II secretion system secretin EtpD 0.48 NIAGMN_05185 fur ferric iron uptake transcriptional regulator — —
Shewanella sp. ANA-3 0.18 Shewana3_0151 general secretion pathway protein D (RefSeq) 0.45 Shewana3_1716 fur ferric uptake regulator (RefSeq) — —
Vibrio cholerae E7946 ATCC 55056 0.17 CSW01_13790 type II secretion system protein GspD 0.45 CSW01_10515 transcriptional repressor — —
Rahnella sp. WP5 0.17 EX31_RS16165 type II secretion system secretin GspD 0.49 EX31_RS23290 ferric iron uptake transcriptional regulator — —
Enterobacter sp. TBS_079 0.17 MPMX20_01515 Putative secretin GspD 0.49 MPMX20_01329 Ferric uptake regulation protein — —
Klebsiella michiganensis M5al 0.17 BWI76_RS05090 type II secretion system protein GspD 0.48 BWI76_RS08265 transcriptional repressor — —
Erwinia tracheiphila SCR3 0.17 LU632_RS25230 gspD type II secretion system secretin GspD 0.48 LU632_RS16195 fur ferric iron uptake transcriptional regulator — —
Dickeya dadantii 3937 0.17 DDA3937_RS14800 type II secretion system secretin GspD 0.49 DDA3937_RS06325 ferric iron uptake transcriptional regulator — —
Paraburkholderia bryophila 376MFSha3.1 0.16 H281DRAFT_02356 general secretion pathway protein D 0.67 H281DRAFT_06316 ferric uptake regulator, Fur family — —
Pectobacterium carotovorum WPP14 0.16 HER17_RS06685 type II secretion system secretin GspD 0.48 HER17_RS15090 ferric iron uptake transcriptional regulator — —
Dickeya dianthicola ME23 0.14 DZA65_RS16270 type II secretion system secretin GspD 0.49 DZA65_RS06715 ferric iron uptake transcriptional regulator — —
Dickeya dianthicola 67-19 0.14 HGI48_RS15450 type II secretion system secretin GspD 0.49 HGI48_RS06370 ferric iron uptake transcriptional regulator — —
Dyella japonica UNC79MFTsu3.2 0.11 ABZR86_RS13065 type II secretion system secretin GspD 0.42 ABZR86_RS05680 ferric iron uptake transcriptional regulator — —

Not shown: 6 genomes with orthologs for GFF1390 only; 24 genomes with orthologs for GFF2615 only