Conservation of cofitness between Psest_3988 and Psest_2579 in Pseudomonas stutzeri RCH2

56 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_3988 phosphoenolpyruvate carboxykinase (ATP) 1.0 Psest_2579 amidophosphoribosyltransferase 0.42 9
Pseudomonas sp. S08-1 0.83 OH686_11060 phosphoenolpyruvate carboxykinase (ATP) 0.91 OH686_04420 amidophosphoribosyltransferase — —
Pseudomonas fluorescens FW300-N2C3 0.82 AO356_10140 phosphoenolpyruvate carboxykinase [ATP] 0.92 AO356_21465 amidophosphoribosyltransferase 0.44 29
Pseudomonas fluorescens FW300-N2E2 0.82 Pf6N2E2_3899 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) 0.92 Pf6N2E2_76 Amidophosphoribosyltransferase (EC 2.4.2.14) — —
Pseudomonas syringae pv. syringae B728a 0.81 Psyr_0168 Phosphoenolpyruvate carboxykinase (ATP) 0.92 Psyr_1668 amidophosphoribosyltransferase 0.60 18
Pseudomonas syringae pv. syringae B728a ΔmexB 0.81 Psyr_0168 Phosphoenolpyruvate carboxykinase (ATP) 0.92 Psyr_1668 amidophosphoribosyltransferase 0.52 50
Pseudomonas sp. RS175 0.81 PFR28_04874 Phosphoenolpyruvate carboxykinase (ATP) 0.92 PFR28_02811 Amidophosphoribosyltransferase low > 88
Pseudomonas fluorescens GW456-L13 0.81 PfGW456L13_420 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) 0.93 PfGW456L13_3935 Amidophosphoribosyltransferase (EC 2.4.2.14) — —
Pseudomonas fluorescens FW300-N2E3 0.80 AO353_11775 phosphoenolpyruvate carboxykinase [ATP] 0.93 AO353_20690 amidophosphoribosyltransferase — —
Pseudomonas simiae WCS417 0.79 PS417_01210 hypothetical protein 0.93 PS417_18535 amidophosphoribosyltransferase — —
Pseudomonas fluorescens SBW25 0.79 PFLU_RS01320 phosphoenolpyruvate carboxykinase 0.93 PFLU_RS20515 amidophosphoribosyltransferase low > 109
Pseudomonas fluorescens SBW25-INTG 0.79 PFLU_RS01320 phosphoenolpyruvate carboxykinase 0.93 PFLU_RS20515 amidophosphoribosyltransferase low > 109
Marinobacter adhaerens HP15 0.74 HP15_3498 phosphoenolpyruvate carboxykinase (ATP) 0.76 HP15_1821 amidophosphoribosyltransferase — —
Shewanella oneidensis MR-1 0.71 SO0162 pckA phosphoenolpyruvate carboxykinase (ATP) (NCBI ptt file) 0.64 SO3064 purF amidophosphoribosyltransferase (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.71 Shew_3623 phosphoenolpyruvate carboxykinase (RefSeq) 0.64 Shew_2302 amidophosphoribosyltransferase (RefSeq) low > 60
Shewanella sp. ANA-3 0.71 Shewana3_0147 phosphoenolpyruvate carboxykinase (RefSeq) 0.64 Shewana3_1483 amidophosphoribosyltransferase (RefSeq) low > 73
Shewanella amazonensis SB2B 0.71 Sama_0165 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) (from data) 0.64 Sama_2146 amidophosphoribosyltransferase (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.70 MIT1002_03972 Phosphoenolpyruvate carboxykinase [ATP] 0.63 MIT1002_02524 Amidophosphoribosyltransferase low > 70
Fusobacterium nucleatum SB010 0.45 HUW76_06485 phosphoenolpyruvate carboxykinase (ATP) 0.25 HUW76_05170 amidophosphoribosyltransferase low > 35
Agrobacterium fabrum C58 0.45 Atu0035 phosphoenolpyruvate carboxykinase 0.27 Atu1075 amidophosphoribosyltransferase 0.46 36
Sinorhizobium meliloti 1021 0.43 SMc02562 phosphoenolpyruvate carboxykinase 0.26 SMc00554 amidophosphoribosyltransferase 0.36 99
Rhodopseudomonas palustris CGA009 0.43 TX73_001865 phosphoenolpyruvate carboxykinase 0.28 TX73_015990 amidophosphoribosyltransferase — —
Sphingomonas koreensis DSMZ 15582 0.43 Ga0059261_0913 phosphoenolpyruvate carboxykinase (ATP) 0.25 Ga0059261_3626 amidophosphoribosyltransferase (EC 2.4.2.14) — —
Rhizobium sp. OAE497 0.43 ABIE40_RS19415 phosphoenolpyruvate carboxykinase 0.27 ABIE40_RS06270 amidophosphoribosyltransferase low > 107
Dinoroseobacter shibae DFL-12 0.42 Dshi_0213 Phosphoenolpyruvate carboxykinase (ATP) (RefSeq) 0.26 Dshi_2132 amidophosphoribosyltransferase (RefSeq) 0.63 14
Bosea sp. OAE506 0.41 ABIE41_RS02665 phosphoenolpyruvate carboxykinase 0.27 ABIE41_RS17810 amidophosphoribosyltransferase low > 77
Phaeobacter inhibens DSM 17395 0.41 PGA1_c01140 phosphoenolpyruvate carboxykinase 0.27 PGA1_c10810 amidophosphoribosyltransferase PurF 0.72 12
Pantoea sp. MT58 0.37 IAI47_01830 phosphoenolpyruvate carboxykinase (ATP) 0.62 IAI47_06275 amidophosphoribosyltransferase low > 76
Escherichia coli ECOR38 0.36 HEPCGN_15865 pckA phosphoenolpyruvate carboxykinase (ATP) 0.63 HEPCGN_21910 purF amidophosphoribosyltransferase low > 85
Escherichia coli ECRC62 0.36 BNILDI_02685 pckA phosphoenolpyruvate carboxykinase (ATP) 0.63 BNILDI_13255 purF amidophosphoribosyltransferase — —
Escherichia coli Nissle 1917 0.36 ECOLIN_RS19435 phosphoenolpyruvate carboxykinase (ATP) 0.63 ECOLIN_RS13405 amidophosphoribosyltransferase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.36 OHPLBJKB_00300 Phosphoenolpyruvate carboxykinase (ATP) 0.62 OHPLBJKB_01393 Amidophosphoribosyltransferase 0.38 37
Escherichia coli BL21 0.36 ECD_03255 phosphoenolpyruvate carboxykinase [ATP] 0.63 ECD_02237 amidophosphoribosyltransferase 0.47 29
Escherichia coli ECOR27 0.36 NOLOHH_08835 pckA phosphoenolpyruvate carboxykinase (ATP) 0.63 NOLOHH_14335 purF amidophosphoribosyltransferase 0.57 16
Escherichia coli BW25113 0.36 b3403 pck phosphoenolpyruvate carboxykinase (NCBI) 0.63 b2312 purF amidophosphoribosyltransferase (NCBI) low > 76
Escherichia fergusonii Becca 0.36 EFB2_00425 Phosphoenolpyruvate carboxykinase (ATP) 0.63 EFB2_01546 Amidophosphoribosyltransferase low > 86
Kangiella aquimarina DSM 16071 0.36 B158DRAFT_2395 phosphoenolpyruvate carboxykinase (ATP) 0.70 B158DRAFT_1488 amidophosphoribosyltransferase (EC 2.4.2.14) — —
Vibrio cholerae E7946 ATCC 55056 0.36 CSW01_13810 phosphoenolpyruvate carboxykinase (ATP) 0.63 CSW01_05115 amidophosphoribosyltransferase low > 62
Escherichia coli ECRC99 0.36 KEDOAH_11095 pckA phosphoenolpyruvate carboxykinase (ATP) 0.63 KEDOAH_05480 purF amidophosphoribosyltransferase — —
Serratia liquefaciens MT49 0.36 IAI46_10700 phosphoenolpyruvate carboxykinase (ATP) 0.63 IAI46_17810 amidophosphoribosyltransferase low > 86
Escherichia coli ECRC101 0.36 OKFHMN_17045 pckA phosphoenolpyruvate carboxykinase (ATP) 0.63 OKFHMN_22715 purF amidophosphoribosyltransferase — —
Escherichia coli ECRC98 0.36 JDDGAC_20675 pckA phosphoenolpyruvate carboxykinase (ATP) 0.63 JDDGAC_26675 purF amidophosphoribosyltransferase — —
Escherichia coli ECRC102 0.36 NIAGMN_14815 pckA phosphoenolpyruvate carboxykinase (ATP) 0.63 NIAGMN_20485 purF amidophosphoribosyltransferase — —
Escherichia coli ECRC101 0.36 MCAODC_07575 pckA phosphoenolpyruvate carboxykinase (ATP) 0.63 MCAODC_13755 purF amidophosphoribosyltransferase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.36 GFF615 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) 0.62 GFF1927 Amidophosphoribosyltransferase (EC 2.4.2.14) low > 78
Enterobacter sp. TBS_079 0.36 MPMX20_04290 Phosphoenolpyruvate carboxykinase (ATP) 0.62 MPMX20_03247 Amidophosphoribosyltransferase low > 85
Dickeya dianthicola ME23 0.36 DZA65_RS20830 phosphoenolpyruvate carboxykinase (ATP) 0.63 DZA65_RS15335 amidophosphoribosyltransferase low > 75
Enterobacter asburiae PDN3 0.36 EX28DRAFT_4140 phosphoenolpyruvate carboxykinase (ATP) 0.62 EX28DRAFT_0292 amidophosphoribosyltransferase (EC 2.4.2.14) low > 76
Dickeya dianthicola 67-19 0.36 HGI48_RS19740 phosphoenolpyruvate carboxykinase (ATP) 0.63 HGI48_RS14405 amidophosphoribosyltransferase low > 71
Erwinia tracheiphila SCR3 0.36 LU632_RS22930 pckA phosphoenolpyruvate carboxykinase (ATP) 0.63 LU632_RS07865 purF amidophosphoribosyltransferase low > 74
Rahnella sp. WP5 0.35 EX31_RS04780 phosphoenolpyruvate carboxykinase (ATP) 0.62 EX31_RS19570 amidophosphoribosyltransferase low > 89
Klebsiella michiganensis M5al 0.35 BWI76_RS26155 phosphoenolpyruvate carboxykinase (ATP) 0.62 BWI76_RS20350 amidophosphoribosyltransferase low > 92
Dickeya dadantii 3937 0.35 DDA3937_RS19610 phosphoenolpyruvate carboxykinase (ATP) 0.64 DDA3937_RS14435 amidophosphoribosyltransferase low > 74
Pectobacterium carotovorum WPP14 0.35 HER17_RS01710 phosphoenolpyruvate carboxykinase (ATP) 0.63 HER17_RS07020 amidophosphoribosyltransferase low > 75
Phocaeicola dorei CL03T12C01 0.34 ABI39_RS06685 phosphoenolpyruvate carboxykinase (ATP) 0.12 ABI39_RS20675 hypothetical protein — —
Phocaeicola vulgatus CL09T03C04 0.34 HMPREF1058_RS10065 phosphoenolpyruvate carboxykinase (ATP) 0.12 HMPREF1058_RS06880 amidophosphoribosyltransferase — —
Parabacteroides merdae CL09T00C40 0.33 HMPREF1078_RS07235 phosphoenolpyruvate carboxykinase (ATP) 0.12 HMPREF1078_RS10430 amidophosphoribosyltransferase — —

Not shown: 7 genomes with orthologs for Psest_3988 only; 39 genomes with orthologs for Psest_2579 only